cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py HrcA_72h-GSM1661998.36mers.unique.bam SAMstats-HrcA_72h-GSM1661998.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py Wcw_1671_EB-GSM1661999.36mers.unique.bam SAMstats-Wcw_1671_EB-GSM1661999.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py Euo_72h-GSM1662000.36mers.unique.bam SAMstats-Euo_72h-GSM1662000.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py PhoB_EB-GSM1662001.36mers.unique.bam SAMstats-PhoB_EB-GSM1662001.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py Wcw_1223_56h-GSM1662002.36mers.unique.bam SAMstats-Wcw_1223_56h-GSM1662002.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py ParB_EB-GSM1662003.36mers.unique.bam SAMstats-ParB_EB-GSM1662003.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py NrdR_EB-GSM1662004.36mers.unique.bam SAMstats-NrdR_EB-GSM1662004.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py AtoC_EB-GSM1662005.36mers.unique.bam SAMstats-AtoC_EB-GSM1662005.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py DnaA3_24h-GSM1662006.36mers.unique.bam SAMstats-DnaA3_24h-GSM1662006.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/57-Waddlia_chondrophila_WSU_86_1044_uid49531; python /N/dc2/projects/marinovg/code/SAMstats.py DnaA1_72h-GSM1662007.36mers.unique.bam SAMstats-DnaA1_72h-GSM1662007.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Waddlia_chondrophila_WSU_86_1044_uid49531/NC_014225+NC_014226.chrom.sizes samtools