cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=pyruvate_1_IP1-TrmBL1.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=pyruvate_1_IP1-TrmBL1.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=pyruvate_1_IP2-TrmBL1.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=pyruvate_1_IP2-TrmBL1.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=pyruvate_1_input.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=pyruvate_1_input.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=pyruvate_2_IP1-TrmBL1.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=pyruvate_2_IP1-TrmBL1.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=pyruvate_2_IP2-TrmBL1.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=pyruvate_2_IP2-TrmBL1.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=pyruvate_2_input.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=pyruvate_2_input.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=starch_1_IP1-TrmBL1.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=starch_1_IP1-TrmBL1.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=starch_1_IP2-TrmBL1.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=starch_1_IP2-TrmBL1.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=starch_1_input.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=starch_1_input.36mers.unique.QC