cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py pyruvate_1_input.36mers.unique.bam SAMstats-pyruvate_1_input.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py pyruvate_1_IP1-TrmBL1.36mers.unique.bam SAMstats-pyruvate_1_IP1-TrmBL1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py pyruvate_1_IP2-TrmBL1.36mers.unique.bam SAMstats-pyruvate_1_IP2-TrmBL1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py pyruvate_2_input.36mers.unique.bam SAMstats-pyruvate_2_input.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py pyruvate_2_IP1-TrmBL1.36mers.unique.bam SAMstats-pyruvate_2_IP1-TrmBL1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py pyruvate_2_IP2-TrmBL1.36mers.unique.bam SAMstats-pyruvate_2_IP2-TrmBL1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py starch_1_input.36mers.unique.bam SAMstats-starch_1_input.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py starch_1_IP1-TrmBL1.36mers.unique.bam SAMstats-starch_1_IP1-TrmBL1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/54-Pyrococcus_furiosus_DSM3638-ASM730v1; python /N/dc2/projects/marinovg/code/SAMstats.py starch_1_IP2-TrmBL1.36mers.unique.bam SAMstats-starch_1_IP2-TrmBL1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pyrococcus_furiosus_DSM3638-ASM730v1/GCA_000007305.1_ASM730v1_genomic.chrom.sizes samtools