cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FNR_input_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes FNR_input_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FNR_input_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes FNR_input_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FNR_overexpression_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes FNR_overexpression_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FNR_overexpression_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes FNR_overexpression_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FNR_input_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes FNR_input_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FNR_input_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes FNR_input_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FNR_overexpression_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes FNR_overexpression_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FNR_overexpression_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes FNR_overexpression_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &