cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=FNR_input_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=FNR_input_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=FNR_input_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=FNR_input_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=FNR_overexpression_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=FNR_overexpression_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=FNR_overexpression_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=FNR_overexpression_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.QC