cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/SAMstats.py FNR_input_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.bam SAMstats-FNR_input_R._capsulatus_replicate_3_ChIP-seq.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/SAMstats.py FNR_input_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.bam SAMstats-FNR_input_R._capsulatus_replicate_1_ChIP-seq.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/SAMstats.py FNR_overexpression_R._capsulatus_replicate_3_ChIP-seq.36mers.unique.bam SAMstats-FNR_overexpression_R._capsulatus_replicate_3_ChIP-seq.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/52-Rhodobacter_capsulatus_SB1003; python /N/dc2/projects/marinovg/code/SAMstats.py FNR_overexpression_R._capsulatus_replicate_1_ChIP-seq.36mers.unique.bam SAMstats-FNR_overexpression_R._capsulatus_replicate_1_ChIP-seq.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_capsulatus_SB_1003_uid47509/NC_014034+NC_014035.chrom.sizes samtools