cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py mvfR1-GSM1593043.36mers.unique.bam SAMstats-mvfR1-GSM1593043.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py mvfR2-GSM1593044.36mers.unique.bam SAMstats-mvfR2-GSM1593044.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py soxR1-GSM1593045.36mers.unique.bam SAMstats-soxR1-GSM1593045.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py soxR2-GSM1593046.36mers.unique.bam SAMstats-soxR2-GSM1593046.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py rpoN1-GSM1593047.36mers.unique.bam SAMstats-rpoN1-GSM1593047.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py rpoN2-GSM1593048.36mers.unique.bam SAMstats-rpoN2-GSM1593048.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py vfr1-GSM1593049.36mers.unique.bam SAMstats-vfr1-GSM1593049.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py vfr2-GSM1593050.36mers.unique.bam SAMstats-vfr2-GSM1593050.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py algR1-GSM1593051.36mers.unique.bam SAMstats-algR1-GSM1593051.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py algR2-GSM1593052.36mers.unique.bam SAMstats-algR2-GSM1593052.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py exsA1-GSM1593053.36mers.unique.bam SAMstats-exsA1-GSM1593053.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py exsA2-GSM1593054.36mers.unique.bam SAMstats-exsA2-GSM1593054.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py gacA1-GSM1593055.36mers.unique.bam SAMstats-gacA1-GSM1593055.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py gacA2-GSM1593056.36mers.unique.bam SAMstats-gacA2-GSM1593056.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py 2588-1-GSM1593057.36mers.unique.bam SAMstats-2588-1-GSM1593057.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py 2588-2-GSM1593058.36mers.unique.bam SAMstats-2588-2-GSM1593058.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py mexT1-GSM1593059.36mers.unique.bam SAMstats-mexT1-GSM1593059.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py mexT2-GSM1593060.36mers.unique.bam SAMstats-mexT2-GSM1593060.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py wspR1-GSM1593061.36mers.unique.bam SAMstats-wspR1-GSM1593061.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/41-Pseudomonas_aeruginosa_UCBPP-PA14; python /N/dc2/projects/marinovg/code/SAMstats.py wspR2-GSM1593062.36mers.unique.bam SAMstats-wspR2-GSM1593062.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Pseudomonas_aeruginosa_UCBPP-PA14-ASM1462v1/GCA_000014625.1_ASM1462v1_genomic.chrom.sizes samtools