cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== CrpK_3xMyc_ChIP_Seq-GSM1417293.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes CrpK_3xMyc_ChIP_Seq-GSM1417293.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FnrL_ChIP_Seq_Rep1-GSM1417296.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes FnrL_ChIP_Seq_Rep1-GSM1417296.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FnrL_ChIP_Seq_Rep2-GSM1417297.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes FnrL_ChIP_Seq_Rep2-GSM1417297.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FnrL_ChIP_Seq_Rep3-GSM1417298.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes FnrL_ChIP_Seq_Rep3-GSM1417298.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FnrL_Control_ChIP-GSM1417299.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes FnrL_Control_ChIP-GSM1417299.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Input_DNA-GSM1417300.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes Input_DNA-GSM1417300.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Input_DNA_pairedEnd-GSM1417301.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes Input_DNA_pairedEnd-GSM1417301.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Myc_Control_ChIP_seq_Aero-GSM1417302.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes Myc_Control_ChIP_seq_Aero-GSM1417302.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Myc_Control_ChIP_seq_Photo-GSM1417303.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes Myc_Control_ChIP_seq_Photo-GSM1417303.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== PrrA_3xMyc_ChIP_Seq-GSM1417292.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes PrrA_3xMyc_ChIP_Seq-GSM1417292.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RSP_2888_3xMyc_ChIP_Seq_Rep1-GSM1417294.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes RSP_2888_3xMyc_ChIP_Seq_Rep1-GSM1417294.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RSP_2888_3xMyc_ChIP_Seq_Rep2-GSM1417295.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes RSP_2888_3xMyc_ChIP_Seq_Rep2-GSM1417295.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== CrpK_3xMyc_ChIP_Seq-GSM1417293.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes CrpK_3xMyc_ChIP_Seq-GSM1417293.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FnrL_ChIP_Seq_Rep1-GSM1417296.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes FnrL_ChIP_Seq_Rep1-GSM1417296.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FnrL_ChIP_Seq_Rep2-GSM1417297.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes FnrL_ChIP_Seq_Rep2-GSM1417297.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FnrL_ChIP_Seq_Rep3-GSM1417298.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes FnrL_ChIP_Seq_Rep3-GSM1417298.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== FnrL_Control_ChIP-GSM1417299.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes FnrL_Control_ChIP-GSM1417299.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Input_DNA-GSM1417300.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes Input_DNA-GSM1417300.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Input_DNA_pairedEnd-GSM1417301.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes Input_DNA_pairedEnd-GSM1417301.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Myc_Control_ChIP_seq_Aero-GSM1417302.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes Myc_Control_ChIP_seq_Aero-GSM1417302.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Myc_Control_ChIP_seq_Photo-GSM1417303.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes Myc_Control_ChIP_seq_Photo-GSM1417303.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== PrrA_3xMyc_ChIP_Seq-GSM1417292.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes PrrA_3xMyc_ChIP_Seq-GSM1417292.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RSP_2888_3xMyc_ChIP_Seq_Rep1-GSM1417294.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes RSP_2888_3xMyc_ChIP_Seq_Rep1-GSM1417294.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/25-Rhodobacter_sphaeroides; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RSP_2888_3xMyc_ChIP_Seq_Rep2-GSM1417295.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Rhodobacter_sphaeroides_2.4.1-ASM1290v2/GCA_000012905.2_ASM1290v2_genomic.chrom.sizes RSP_2888_3xMyc_ChIP_Seq_Rep2-GSM1417295.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &