cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/23-Escherichia_coli_str._MG1655; python /N/dc2/projects/marinovg/code/SAMstats.py MG1655-FlhC-FLAG-rep1.36mers.unique.bam SAMstats-MG1655-FlhC-FLAG-rep1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/23-Escherichia_coli_str._MG1655; python /N/dc2/projects/marinovg/code/SAMstats.py MG1655-FlhC-FLAG-rep2.36mers.unique.bam SAMstats-MG1655-FlhC-FLAG-rep2.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/23-Escherichia_coli_str._MG1655; python /N/dc2/projects/marinovg/code/SAMstats.py MG1655-FlhD-FLAG-rep1.36mers.unique.bam SAMstats-MG1655-FlhD-FLAG-rep1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/23-Escherichia_coli_str._MG1655; python /N/dc2/projects/marinovg/code/SAMstats.py MG1655-FlhD-FLAG-rep2.36mers.unique.bam SAMstats-MG1655-FlhD-FLAG-rep2.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/23-Escherichia_coli_str._MG1655; python /N/dc2/projects/marinovg/code/SAMstats.py MG1655-FliA-FLAG-rep1.36mers.unique.bam SAMstats-MG1655-FliA-FLAG-rep1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/23-Escherichia_coli_str._MG1655; python /N/dc2/projects/marinovg/code/SAMstats.py MG1655-FliA-FLAG-rep2.36mers.unique.bam SAMstats-MG1655-FliA-FLAG-rep2.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/23-Escherichia_coli_str._MG1655; python /N/dc2/projects/marinovg/code/SAMstats.py MG1655-rep2.36mers.unique.bam SAMstats-MG1655-rep2.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/23-Escherichia_coli_str._MG1655; python /N/dc2/projects/marinovg/code/SAMstats.py MG1655-untagged-rep1.36mers.unique.bam SAMstats-MG1655-untagged-rep1.36mers.unique -bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes samtools