cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA-delhuB-late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA-delhuB-late-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA-delhuB-mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA-delhuB-mid-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA-delhuB-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA-delhuB-stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA-delhuB-transition-to-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA-delhuB-transition-to-stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA_late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA_late-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA_mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA_mid-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA_stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA_stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA_transition-to-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA_transition-to-stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB-delhuA-late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB-delhuA-late-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB-delhuA-mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB-delhuA-mid-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB-delhuA-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB-delhuA-stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB-delhuA-transition-to-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB-delhuA-transition-to-stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB_late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB_late-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB_mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB_mid-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB_stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB_stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB_transition-two-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB_transition-two-stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfA_late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfA_late-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfA_mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfA_mid-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfA_transition-to-stationary.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfA_transition-to-stationary.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfB_late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfB_late-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfB_mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfB_mid-exponential_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfB_stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfB_stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfB_transition-to-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfB_transition-to-stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfD_stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfD_stationary_phase.36mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA-delhuB-late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA-delhuB-late-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA-delhuB-mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA-delhuB-mid-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA-delhuB-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA-delhuB-stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA-delhuB-transition-to-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA-delhuB-transition-to-stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA_late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA_late-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA_mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA_mid-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA_stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA_stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupA_transition-to-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupA_transition-to-stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB-delhuA-late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB-delhuA-late-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB-delhuA-mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB-delhuA-mid-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB-delhuA-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB-delhuA-stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB-delhuA-transition-to-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB-delhuA-transition-to-stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB_late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB_late-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB_mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB_mid-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB_stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB_stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== HupB_transition-two-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes HupB_transition-two-stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfA_late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfA_late-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfA_mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfA_mid-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfA_transition-to-stationary.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfA_transition-to-stationary.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfB_late-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfB_late-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfB_mid-exponential_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfB_mid-exponential_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfB_stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfB_stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfB_transition-to-stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfB_transition-to-stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== IhfD_stationary_phase.36mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes IhfD_stationary_phase.36mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &