cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupA-delhuB-late-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupA-delhuB-late-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupA-delhuB-mid-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupA-delhuB-mid-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupA-delhuB-stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupA-delhuB-stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupA-delhuB-transition-to-stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupA-delhuB-transition-to-stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupA_late-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupA_late-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupA_mid-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupA_mid-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupA_stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupA_stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupA_transition-to-stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupA_transition-to-stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupB-delhuA-late-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupB-delhuA-late-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupB-delhuA-mid-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupB-delhuA-mid-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupB-delhuA-stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupB-delhuA-stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupB-delhuA-transition-to-stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupB-delhuA-transition-to-stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupB_late-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupB_late-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupB_mid-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupB_mid-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupB_stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupB_stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HupB_transition-two-stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HupB_transition-two-stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=IhfA_late-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=IhfA_late-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=IhfA_mid-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=IhfA_mid-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=IhfA_transition-to-stationary.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=IhfA_transition-to-stationary.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=IhfB_late-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=IhfB_late-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=IhfB_mid-exponential_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=IhfB_mid-exponential_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=IhfB_stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=IhfB_stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=IhfB_transition-to-stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=IhfB_transition-to-stationary_phase.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/19-Escherichia_coli_str._K-12; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=IhfD_stationary_phase.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=IhfD_stationary_phase.36mers.unique.QC