cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=Input_DNA1-GSM1003222.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=Input_DNA1-GSM1003222.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=Input_DNA2-GSM1003223.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=Input_DNA2-GSM1003223.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=NusA_CS_Exp1-GSM1003218.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=NusA_CS_Exp1-GSM1003218.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=NusA_CS_Exp2-GSM1003219.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=NusA_CS_Exp2-GSM1003219.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=NusA_CS_Stat1-GSM1003220.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=NusA_CS_Stat1-GSM1003220.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=NusA_CS_Stat2-GSM1003221.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=NusA_CS_Stat2-GSM1003221.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RNAP_CS_Exp1-GSM1003214.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RNAP_CS_Exp1-GSM1003214.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RNAP_CS_Exp2-GSM1003215.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RNAP_CS_Exp2-GSM1003215.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RNAP_CS_Stat1-GSM1003216.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RNAP_CS_Stat1-GSM1003216.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/17-Mycobacterium_tuberculosis_H37Rv; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RNAP_CS_Stat2-GSM1003217.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RNAP_CS_Stat2-GSM1003217.36mers.unique.QC