cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=H-NS_early-exponential-GSM613804.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=H-NS_early-exponential-GSM613804.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=H-NS_mid-exponential-GSM613805.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=H-NS_mid-exponential-GSM613805.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=H-NS_stationary-GSM613807.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=H-NS_stationary-GSM613807.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=H-NS_transition-to-stationary-GSM613806.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=H-NS_transition-to-stationary-GSM613806.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=fis_early-exponential-GSM613802.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=fis_early-exponential-GSM613802.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=fis_mid-exponential-GSM613803.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=fis_mid-exponential-GSM613803.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=rpo_delfis_mid-exponential-GSM613809.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=rpo_delfis_mid-exponential-GSM613809.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=rpo_delhns_mid-exponential-GSM613810.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=rpo_delhns_mid-exponential-GSM613810.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/14-Escherichia_coli_K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=rpo_wt_mid-exponential-GSM613808.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=rpo_wt_mid-exponential-GSM613808.36mers.unique.QC