cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/13-Mycobacterium_smegmatis_str._MC2_155; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=CarD_HA_ChIP_seq_1-GSM1171540.50mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=CarD_HA_ChIP_seq_1-GSM1171540.50mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/13-Mycobacterium_smegmatis_str._MC2_155; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=CarD_HA_ChIP_seq_2-GSM1171541.50mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=CarD_HA_ChIP_seq_2-GSM1171541.50mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/13-Mycobacterium_smegmatis_str._MC2_155; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HA_ChIP_seq_1-GSM1171542.50mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HA_ChIP_seq_1-GSM1171542.50mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/13-Mycobacterium_smegmatis_str._MC2_155; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=HA_ChIP_seq_2-GSM1171543.50mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=HA_ChIP_seq_2-GSM1171543.50mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/13-Mycobacterium_smegmatis_str._MC2_155; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RNAPb_ChIP_seq_1-GSM1171544.50mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RNAPb_ChIP_seq_1-GSM1171544.50mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/13-Mycobacterium_smegmatis_str._MC2_155; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RNAPb_ChIP_seq_2-GSM1171545.50mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RNAPb_ChIP_seq_2-GSM1171545.50mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/13-Mycobacterium_smegmatis_str._MC2_155; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RNAPs_ChIP_seq_1-GSM1171546.50mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RNAPs_ChIP_seq_1-GSM1171546.50mers.unique.QC