cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=CtrA_ChIPseq-GSM1277021.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=CtrA_ChIPseq-GSM1277021.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=CtrA_delpleC_ChIPseq-GSM1277026.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=CtrA_delpleC_ChIPseq-GSM1277026.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=FlbD_ChIPseq-GSM1277023.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=FlbD_ChIPseq-GSM1277023.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=MucR1_ChIPseq-GSM1277024.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=MucR1_ChIPseq-GSM1277024.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=MucR2_ChIPseq-GSM1277025.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=MucR2_ChIPseq-GSM1277025.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=SciP_ChIPseq-GSM1277022.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=SciP_ChIPseq-GSM1277022.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=SciP_delmucR12_ChIPseq-GSM1277027.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=SciP_delmucR12_ChIPseq-GSM1277027.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=sfCtrA_ChIPseq-GSM1277028.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=sfCtrA_ChIPseq-GSM1277028.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=sfMucR1_ChIPseq-GSM1277030.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=sfMucR1_ChIPseq-GSM1277030.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=sfMucR2_ChIPseq-GSM1277031.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=sfMucR2_ChIPseq-GSM1277031.36mers.unique.QC
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/08-Sinorhizobium_fredii+Caulobacter_vibrioides; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=sfSciP_ChIPseq-GSM1277029.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=sfSciP_ChIPseq-GSM1277029.36mers.unique.QC