cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Fur_with_DPD_1-ChIP-exo-GSM1326337.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Fur_with_DPD_1-ChIP-exo-GSM1326337.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Fur_with_DPD_2-ChIP-exo-GSM1326338.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Fur_with_DPD_2-ChIP-exo-GSM1326338.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Fur_with_Fe_1-ChIP-exo-GSM1326335.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Fur_with_Fe_1-ChIP-exo-GSM1326335.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Fur_with_Fe_2-ChIP-exo-GSM1326336.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Fur_with_Fe_2-ChIP-exo-GSM1326336.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_DPD_1-ChIP-exo-GSM1326343.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_DPD_1-ChIP-exo-GSM1326343.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_DPD_2-ChIP-exo-GSM1326344.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_DPD_2-ChIP-exo-GSM1326344.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_DPD_and_rifampicin_1-ChIP-exo-GSM1326345.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_DPD_and_rifampicin_1-ChIP-exo-GSM1326345.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_DPD_and_rifampicin_2-ChIP-exo-GSM1326346.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_DPD_and_rifampicin_2-ChIP-exo-GSM1326346.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_Fe_1-ChIP-exo-GSM1326339.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_Fe_1-ChIP-exo-GSM1326339.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_Fe_2-ChIP-exo-GSM1326340.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_Fe_2-ChIP-exo-GSM1326340.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_Fe_and_rifampicin_1-ChIP-exo-GSM1326341.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_Fe_and_rifampicin_1-ChIP-exo-GSM1326341.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_Fe_and_rifampicin_2-ChIP-exo-GSM1326342.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_Fe_and_rifampicin_2-ChIP-exo-GSM1326342.30mers.unique.plus.wig -stranded + -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Fur_with_DPD_1-ChIP-exo-GSM1326337.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Fur_with_DPD_1-ChIP-exo-GSM1326337.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Fur_with_DPD_2-ChIP-exo-GSM1326338.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Fur_with_DPD_2-ChIP-exo-GSM1326338.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Fur_with_Fe_1-ChIP-exo-GSM1326335.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Fur_with_Fe_1-ChIP-exo-GSM1326335.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== Fur_with_Fe_2-ChIP-exo-GSM1326336.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Fur_with_Fe_2-ChIP-exo-GSM1326336.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_DPD_1-ChIP-exo-GSM1326343.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_DPD_1-ChIP-exo-GSM1326343.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_DPD_2-ChIP-exo-GSM1326344.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_DPD_2-ChIP-exo-GSM1326344.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_DPD_and_rifampicin_1-ChIP-exo-GSM1326345.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_DPD_and_rifampicin_1-ChIP-exo-GSM1326345.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_DPD_and_rifampicin_2-ChIP-exo-GSM1326346.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_DPD_and_rifampicin_2-ChIP-exo-GSM1326346.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_Fe_1-ChIP-exo-GSM1326339.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_Fe_1-ChIP-exo-GSM1326339.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_Fe_2-ChIP-exo-GSM1326340.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_Fe_2-ChIP-exo-GSM1326340.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_Fe_and_rifampicin_1-ChIP-exo-GSM1326341.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_Fe_and_rifampicin_1-ChIP-exo-GSM1326341.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; python /N/dc2/projects/marinovg/code/makewigglefromBAM-NH.py ===== RpoB_with_Fe_and_rifampicin_2-ChIP-exo-GSM1326342.30mers.unique.bam /N/dc2/projects/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RpoB_with_Fe_and_rifampicin_2-ChIP-exo-GSM1326342.30mers.unique.minus.wig -stranded - -uniqueBAM -notitle -RPM &