cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=Fur_with_DPD_1-ChIP-exo-GSM1326337.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=Fur_with_DPD_1-ChIP-exo-GSM1326337.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=Fur_with_DPD_2-ChIP-exo-GSM1326338.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=Fur_with_DPD_2-ChIP-exo-GSM1326338.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=Fur_with_Fe_1-ChIP-exo-GSM1326335.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=Fur_with_Fe_1-ChIP-exo-GSM1326335.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=Fur_with_Fe_2-ChIP-exo-GSM1326336.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=Fur_with_Fe_2-ChIP-exo-GSM1326336.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RpoB_with_DPD_1-ChIP-exo-GSM1326343.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RpoB_with_DPD_1-ChIP-exo-GSM1326343.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RpoB_with_DPD_2-ChIP-exo-GSM1326344.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RpoB_with_DPD_2-ChIP-exo-GSM1326344.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RpoB_with_DPD_and_rifampicin_1-ChIP-exo-GSM1326345.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RpoB_with_DPD_and_rifampicin_1-ChIP-exo-GSM1326345.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RpoB_with_DPD_and_rifampicin_2-ChIP-exo-GSM1326346.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RpoB_with_DPD_and_rifampicin_2-ChIP-exo-GSM1326346.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RpoB_with_Fe_1-ChIP-exo-GSM1326339.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RpoB_with_Fe_1-ChIP-exo-GSM1326339.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RpoB_with_Fe_2-ChIP-exo-GSM1326340.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RpoB_with_Fe_2-ChIP-exo-GSM1326340.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RpoB_with_Fe_and_rifampicin_1-ChIP-exo-GSM1326341.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RpoB_with_Fe_and_rifampicin_1-ChIP-exo-GSM1326341.30mers.unique.QC &
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/03-Escherichia_coli_str._K-12_substr._MG1655; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=RpoB_with_Fe_and_rifampicin_2-ChIP-exo-GSM1326342.30mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=RpoB_with_Fe_and_rifampicin_2-ChIP-exo-GSM1326342.30mers.unique.QC &