cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/01-Anabaena_sp._PCC_7120; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=NtcA-ChIP-GSM1254240.36mers.Anabaena_sp._PCC_7120.unique.bam -i=NtcA-ChIP-GSM1254240.36mers.Anabaena_sp._PCC_7120.unique.bam -fdr=0.01 -p=16 -s=-0:2:400 -odir=SPP-fdr0.01-NtcA-ChIP-GSM1254240 -savn=SPP-fdr0.01-NtcA-ChIP-GSM1254240.narrowPeak
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/01-Anabaena_sp._PCC_7120; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=NtcA-ChIP-GSM1254240.36mers.Anabaena_sp._PCC_7120.unique.bam -i=NtcA-ChIP-GSM1254240.36mers.Anabaena_sp._PCC_7120.unique.bam -fdr=0.02 -p=16 -s=-0:2:400 -odir=SPP-fdr0.02-NtcA-ChIP-GSM1254240 -savn=SPP-fdr0.02-NtcA-ChIP-GSM1254240.narrowPeak
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/01-Anabaena_sp._PCC_7120; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=NtcA-ChIP-GSM1254240.36mers.Anabaena_sp._PCC_7120.unique.bam -i=NtcA-ChIP-GSM1254240.36mers.Anabaena_sp._PCC_7120.unique.bam -fdr=0.05 -p=16 -s=-0:2:400 -odir=SPP-fdr0.05-NtcA-ChIP-GSM1254240 -savn=SPP-fdr0.05-NtcA-ChIP-GSM1254240.narrowPeak
cd /N/dc2/projects/marinovg/2014-10-05-prokaryote-ChIP-seq/01-Anabaena_sp._PCC_7120; module load openmpi; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=NtcA-ChIP-GSM1254240.36mers.Anabaena_sp._PCC_7120.unique.bam -i=NtcA-ChIP-GSM1254240.36mers.Anabaena_sp._PCC_7120.unique.bam -fdr=0.10 -p=16 -s=-0:2:400 -odir=SPP-fdr0.10-NtcA-ChIP-GSM1254240 -savn=SPP-fdr0.10-NtcA-ChIP-GSM1254240.narrowPeak