cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/66-organelles-nucleus-merged-k3m2/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/66-organelles-nucleus-merged-k3m2/TRB1_Wt-_GFP-Trap-GSM1701078.36mers.bam SAMstats-TRB1_Wt-_GFP-Trap-GSM1701078 -bam /N/dc2/projects/marinovg/genomes/TAIR10/TAIR10.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/66-organelles-nucleus-merged-k3m2/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/66-organelles-nucleus-merged-k3m2/TRB1_TRB1-GFP+_GFP-Trap-GSM1701079.36mers.bam SAMstats-TRB1_TRB1-GFP+_GFP-Trap-GSM1701079 -bam /N/dc2/projects/marinovg/genomes/TAIR10/TAIR10.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/66-organelles-nucleus-merged-k3m2/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/66-organelles-nucleus-merged-k3m2/TRB1_Wt-_anti-TRB1-GSM1701080.36mers.bam SAMstats-TRB1_Wt-_anti-TRB1-GSM1701080 -bam /N/dc2/projects/marinovg/genomes/TAIR10/TAIR10.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/66-organelles-nucleus-merged-k3m2/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/66-organelles-nucleus-merged-k3m2/TRB1_TRB1+_anti-TRB1-GSM1701081.36mers.bam SAMstats-TRB1_TRB1+_anti-TRB1-GSM1701081 -bam /N/dc2/projects/marinovg/genomes/TAIR10/TAIR10.chrom.sizes samtools