cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/58/; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=AtDEK3_OE3-1-GSM1348068.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=AtDEK3_OE3-1-GSM1348068.36mers.QC
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/58/; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=AtDEK3_OE3-1_input-GSM1348069.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=AtDEK3_OE3-1_input-GSM1348069.36mers.QC
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/58/; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=AtDEK3_OE9-1-GSM1348070.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=AtDEK3_OE9-1-GSM1348070.36mers.QC
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/58/; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=AtDEK3_OE9-1_inout-GSM1348071.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=AtDEK3_OE9-1_inout-GSM1348071.36mers.QC
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/58/; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=AtDEK3_OE17-4-GSM1348072.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=AtDEK3_OE17-4-GSM1348072.36mers.QC
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/58/; Rscript /N/dc2/projects/marinovg/code/spp/spp_package/run_spp.R -c=AtDEK3_OE17-4_input-GSM1348073.36mers.unique.bam -p=16 -savp -rf -s=-0:2:400 -out=AtDEK3_OE17-4_input-GSM1348073.36mers.QC