cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/54-Oryza_sativa/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/54-Oryza_sativa/29CHIP_Input-GSM1035301.36mers.unique.bam SAMstats-29CHIP_Input-GSM1035301 -bam /N/dc2/projects/marinovg/genomes/Land_plants/Oryza_sativa/Oryza_sativa.MSU6.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/54-Oryza_sativa/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/54-Oryza_sativa/29CHIP_mock-GSM1035302.36mers.unique.bam SAMstats-29CHIP_mock-GSM1035302 -bam /N/dc2/projects/marinovg/genomes/Land_plants/Oryza_sativa/Oryza_sativa.MSU6.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/54-Oryza_sativa/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/54-Oryza_sativa/MADS29-CHIP_IPsample-GSM1035300.36mers.unique.bam SAMstats-MADS29-CHIP_IPsample-GSM1035300 -bam /N/dc2/projects/marinovg/genomes/Land_plants/Oryza_sativa/Oryza_sativa.MSU6.chrom.sizes samtools