cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/52-Zea_mays/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/52-Zea_mays/rep1_input-GSM1517647.36mers.unique.bam SAMstats-rep1_input-GSM1517647 -bam /N/dc2/projects/marinovg/genomes/Land_plants/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/52-Zea_mays/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/52-Zea_mays/rep1_FEA4_ChIP-GSM1517648.36mers.unique.bam SAMstats-rep1_FEA4_ChIP-GSM1517648 -bam /N/dc2/projects/marinovg/genomes/Land_plants/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/52-Zea_mays/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/52-Zea_mays/rep2_input-GSM1517649.36mers.unique.bam SAMstats-rep2_input-GSM1517649 -bam /N/dc2/projects/marinovg/genomes/Land_plants/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes samtools
cd /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/52-Zea_mays/; python /N/dc2/projects/marinovg/code/SAMstats.py /N/dc2/projects/marinovg/2013-10-22-Arabidopsis/52-Zea_mays/rep2_FEA4_ChIP-GSM1517650.36mers.unique.bam SAMstats-rep2_FEA4_ChIP-GSM1517650 -bam /N/dc2/projects/marinovg/genomes/Land_plants/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes samtools