condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-ChIP-GSM957190.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-ChIP-GSM957190.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-Total_input-GSM957191.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-Total_input-GSM957191.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-ChIP-GSM957186.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-ChIP-GSM957186.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-Total_input-GSM957187.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-Total_input-GSM957187.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-ChIP-GSM957190.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-ChIP-GSM957190.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-Total_input-GSM957191.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-Total_input-GSM957191.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-ChIP-GSM957186.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-ChIP-GSM957186.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-Total_input-GSM957187.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-Total_input-GSM957187.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-ChIP-GSM957190.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-ChIP-GSM957190.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-Total_input-GSM957191.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-Total_input-GSM957191.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-ChIP-GSM957186.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-ChIP-GSM957186.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-Total_input-GSM957187.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-Total_input-GSM957187.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-ChIP-GSM957190.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-ChIP-GSM957190.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-Total_input-GSM957191.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-Total_input-GSM957191.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-ChIP-GSM957186.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-ChIP-GSM957186.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-Total_input-GSM957187.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-Total_input-GSM957187.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-ChIP-GSM957190.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-ChIP-GSM957190.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-Total_input-GSM957191.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-Total_input-GSM957191.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-ChIP-GSM957186.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-ChIP-GSM957186.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-Total_input-GSM957187.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-Total_input-GSM957187.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-ChIP-GSM957190.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-ChIP-GSM957190.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === ear1-Total_input-GSM957191.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes ear1-Total_input-GSM957191.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-ChIP-GSM957186.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-ChIP-GSM957186.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel1-Total_input-GSM957187.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel1-Total_input-GSM957187.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-ChIP-GSM957188.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-ChIP-GSM957188.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-Total_input-GSM957189.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-Total_input-GSM957189.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-ChIP-GSM957188.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-ChIP-GSM957188.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-Total_input-GSM957189.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-Total_input-GSM957189.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-ChIP-GSM957188.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-ChIP-GSM957188.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-Total_input-GSM957189.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-Total_input-GSM957189.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-ChIP-GSM957188.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-ChIP-GSM957188.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-Total_input-GSM957189.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-Total_input-GSM957189.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-ChIP-GSM957188.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-ChIP-GSM957188.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-Total_input-GSM957189.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-Total_input-GSM957189.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-ChIP-GSM957188.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-ChIP-GSM957188.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === tassel2_and_3-Total_input-GSM957189.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes tassel2_and_3-Total_input-GSM957189.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &