condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_HA-GSM1236538.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_HA-GSM1236538.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_HA-GSM1236538.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_HA-GSM1236538.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_HA-GSM1236538.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_HA-GSM1236538.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_HA-GSM1236538.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_HA-GSM1236538.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_HA-GSM1236538.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_HA-GSM1236538.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_HA-GSM1236536.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_tassel_YFP-GSM1236537.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_HA-GSM1236538.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_HA-GSM1236538.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_tassel_YFP-GSM1236539.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_HA-GSM1236542.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_HA-GSM1236542.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_YFP-GSM1236543.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_YFP-GSM1236543.36mers.k3m2.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_HA-GSM1236542.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_HA-GSM1236542.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_YFP-GSM1236543.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_YFP-GSM1236543.36mers.k3m2.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_HA-GSM1236542.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_HA-GSM1236542.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_YFP-GSM1236543.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_YFP-GSM1236543.36mers.k3m2.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_HA-GSM1236542.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_HA-GSM1236542.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_YFP-GSM1236543.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_YFP-GSM1236543.36mers.k3m2.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_HA-GSM1236542.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_HA-GSM1236542.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_YFP-GSM1236543.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_YFP-GSM1236543.36mers.k3m2.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_HA-GSM1236540.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_ChIPseq_ear_YFP-GSM1236541.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_HA-GSM1236542.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_HA-GSM1236542.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === RA1_input_ear_YFP-GSM1236543.36mers.k3m2.bam /woldlab/castor/data00/home/georgi/genomes/Zea_mays.AGPv3/Zea_mays.AGPv3.chrom.sizes RA1_input_ear_YFP-GSM1236543.36mers.k3m2.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrP" &