condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_1-GSM506210.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_1-GSM506210.36mers.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_2-GSM506211.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_2-GSM506211.36mers.chrM.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_1-GSM506210.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_1-GSM506210.36mers.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_2-GSM506211.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_2-GSM506211.36mers.chrM.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_1-GSM506210.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_1-GSM506210.36mers.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_2-GSM506211.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_2-GSM506211.36mers.chrM.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chrM" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_1-GSM506210.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_1-GSM506210.36mers.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_2-GSM506211.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_2-GSM506211.36mers.chloroplast.minus.RPM.wig -RPM -stranded - -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_1-GSM506210.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_1-GSM506210.36mers.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_2-GSM506211.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_2-GSM506211.36mers.chloroplast.plus.RPM.wig -RPM -stranded + -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_1-GSM506210.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_1-GSM506210.36mers.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &
condor_run "python /woldlab/castor/data00/home/georgi/code/makewigglefromBAM-NH.py === APETALA1-GR_uninduced_control_2-GSM506211.36mers.bam /woldlab/castor/data00/home/georgi/genomes/TAIR10/TAIR10.chrom.sizes APETALA1-GR_uninduced_control_2-GSM506211.36mers.chloroplast.RPM.wig -RPM -notitle -singlebasepair -mismatchesMD 0 -chr chloroplast" &