Cluster #0, n=12
-4	.GTGGTG	207	57	-23.2	198/205
-4	.GCGGTG	125	36	-13.5	85/101
-4	.GTGGCG	120	37	-12.1	62/90
-5	GGCGGT	101	28	-11.5	43/62
-4	.GCGGCG	65	11	-11.1	42/52
-4	.GCCGTG	62	13	-9.3	35/41
-4	.GTCGTG	81	23	-9.2	49/57
-4	.GTGCTG	65	17	-8.1	32/47
-4	.GCGCTG	31	4	-6.7	14/19
-4	.GCGCCG	35	11	-4.2	13/24
-4	.GTGCCG	36	12	-4.0	17/27
-4	.GTCGCG	28	8	-3.8	15/19
Cluster #1, n=34
-3	..GCTGCA	110	18	-18.4	88/111
-4	.TGCTGC	126	27	-17.5	86/101
-4	.AGCTGC	116	23	-17.1	94/106
-4	.TGGTGC	104	18	-16.8	51/70
-4	.CGCTGC	83	11	-15.7	57/67
-3	..GGTGCA	86	16	-13.5	31/53
-4	.CGGTGC	66	10	-11.9	25/34
-3	..GCTGCT	97	26	-11.4	82/85
-2	...CTGCTG	88	22	-11.1	28/56
-3	..GCTGCG	72	15	-10.6	61/67
-3	..GCTGGT	86	23	-10.2	57/61
-2	...CTGCAG	53	8	-9.8	34/72
-5	CCGCTG	59	11	-9.6	28/36
-3	..GGTGCT	61	13	-9.0	20/38
-5	ATGCTG	72	20	-8.4	35/37
-3	..GCTGCC	62	15	-8.3	51/52
-4	.GGCTGC	53	11	-8.1	46/48
-5	GTGCTG	65	17	-8.1	33/36
-5	GCGCTG	31	4	-6.7	14/16
-4	.AGCTGG	55	16	-6.4	35/39
-4	.ACCTGC	53	15	-6.4	23/31
-5	TAGCTG	53	15	-6.4	26/27
-4	.CCCTGC	43	10	-6.3	17/26
-4	.CGCTGG	36	7	-6.2	29/29
-3	..CCTGCT	53	16	-6.0	19/32
-4	.TCCTGC	56	18	-5.9	32/33
-5	TCGCTG	56	18	-5.9	27/30
-3	..GGTGCC	40	10	-5.6	25/27
-4	.GGCTGG	29	6	-5.0	20/21
-3	..CCTGCC	40	12	-4.8	23/23
-3	..CCTGCA	42	14	-4.5	24/29
-4	.GCCTGC	30	9	-3.9	16/17
-3	..GCTGGC	33	11	-3.8	23/24
-3	..GCTGGG	24	8	-3.0	18/19
Cluster #2, n=25
-3	.GACGTG	90	13	-16.2	75/82
-2	..ACGTGG	95	18	-14.6	74/92
-3	.GGCGTG	56	5	-12.8	44/47
-4	TGACGT	91	21	-12.2	45/88
-1	...CGTGTC	75	14	-11.9	43/53
-3	.CACGTG	78	16	-11.6	69/138
-1	...CGTGGC	92	27	-10.0	62/74
-2	..ACGTGC	68	15	-9.7	48/58
-1	...CGTGCA	58	11	-9.3	41/46
-3	.GCCGTG	62	13	-9.3	35/43
-2	..ACGTGT	92	29	-9.2	70/98
-3	.GTCGTG	81	23	-9.2	41/52
-2	..GCGTGC	39	4	-8.9	25/26
-2	..CCGTGC	40	5	-8.4	25/26
-1	...CGTGCC	40	5	-8.4	27/30
-1	...CGTGCT	54	11	-8.4	35/39
-1	...CGTGAC	62	18	-7.1	30/43
-2	..GCGTGT	58	16	-7.0	48/52
-2	..GCGTCG	41	10	-5.9	17/26
-1	...CGTGCG	40	10	-5.6	14/20
-3	.AGCGTC	34	8	-5.2	15/21
-2	..GCGTCA	44	14	-4.9	19/29
-3	.GACGTC	39	12	-4.6	29/60
-2	..TCGTGC	39	13	-4.3	21/27
-3	.TGCGTC	33	11	-3.8	10/17
Cluster #3, n=11
-1	..CGTCAC	113	28	-14.1	59/61
-2	.CCGTCA	91	24	-10.9	84/85
-1	..CGTCGC	71	14	-10.9	35/36
-3	ACCGTC	96	29	-10.1	89/90
-1	..CGTCCA	59	11	-9.6	38/38
-3	GCCGTC	70	17	-9.2	63/65
-3	TCCGTC	64	16	-8.3	61/62
-2	.TCGTCG	81	26	-8.1	56/61
-1	..CGTCGT	73	22	-7.9	29/43
-2	.CCGTCG	63	18	-7.3	64/64
-2	.CCGTCC	45	12	-5.9	42/44
Cluster #4, n=10
-3	.GCCATG	94	23	-12.0	88/101
-3	.GCGATG	82	20	-10.6	62/75
-2	..CCATCG	79	23	-8.8	28/46
-3	.GCCATC	90	30	-8.5	79/81
-2	..GCATGC	27	1	-8.5	12/24
-2	..CCATGG	44	8	-7.6	32/66
-3	.GGCATG	53	14	-6.8	40/50
-4	CGCCAT	65	21	-6.6	40/45
-4	GGCGAT	53	17	-5.6	32/40
-4	CGGCAT	26	8	-3.4	13/13
Cluster #5, n=10
-4	.CGTTCC	61	12	-9.5	47/50
-4	.CGCTCC	45	7	-8.4	39/39
-5	GCGTTC	48	9	-8.0	40/43
-5	GCGCTC	32	5	-6.3	27/27
-5	ACGCTC	39	9	-5.9	37/37
-4	.CGTTCG	39	10	-5.4	38/39
-5	TCGCTC	41	12	-5.0	37/37
-5	TCGTTC	40	13	-4.5	35/37
-4	.CGCTCA	37	12	-4.2	32/32
-4	.CGCTCG	21	6	-3.1	21/21
Cluster #6, n=3
-4	AGGAGG	137	45	-12.8	126/129
-4	CGGAGG	88	27	-9.1	60/77
-4	ACGAGG	55	18	-5.7	47/51
Cluster #7, n=10
-3	..GCAGCG	83	11	-15.7	48/48
-5	TGGCAG	84	14	-14.1	41/50
-2	...CAGTGG	86	15	-14.0	61/65
-4	.GGCAGT	78	14	-12.6	65/73
-3	..GCAGTG	78	15	-12.1	71/71
-5	CTGCAG	53	8	-9.8	18/36
-3	..GCAGAG	64	21	-6.4	57/57
-4	.TGCAGT	63	21	-6.3	50/53
-4	.CGCAGT	42	11	-5.6	35/35
-3	..GCAGTA	48	15	-5.3	36/36
Cluster #8, n=7
-4	.TGCACT	67	8	-13.5	63/64
-5	ATGCAC	62	9	-11.5	48/49
-4	.TGCACG	58	11	-9.3	38/54
-3	..GCACTG	42	8	-7.1	41/41
-5	GTGCAC	32	7	-5.2	25/50
-3	..GCACTC	38	10	-5.2	32/32
-3	..GCACTT	33	11	-3.8	29/29
Cluster #9, n=2
-5	CTCGCC	69	13	-10.9	68/68
-5	CTCGAC	71	23	-7.1	63/65
Cluster #10, n=10
-2	..CAGCAG	88	22	-11.1	51/61
-2	..CAGCCG	70	14	-10.7	63/63
-4	CGCAGC	72	15	-10.6	31/37
-2	..CAGCGG	59	11	-9.6	44/47
-3	.GCAGCC	53	11	-8.1	47/47
0	....GCCGGC	31	4	-6.7	17/34
-2	..CAGCCA	67	22	-6.7	52/54
-1	...AGCCGG	49	13	-6.3	30/32
-3	.CCAGCC	29	6	-5.0	20/20
-2	..CAGCCC	24	8	-3.0	22/22
Cluster #11, n=1
0	ACAGCA	60	17	-7.1	59/60
Cluster #12, n=1
-2	AGGTCA	43	10	-6.3	43/43