Cluster #0, n=172 -6 .....TGGGCTTT 167 3 -44.9 82/89 -7 ....ATGGGCCT 147 5 -36.4 130/133 -7 ....ATGGGCTT 133 4 -33.7 67/77 -8 ...AATGGGCC 131 4 -33.1 119/127 -6 .....TGGGCCTT 117 2 -31.9 106/107 -7 ....TTGGGCTT 126 4 -31.7 69/75 -8 ...ATTGGGCC 106 2 -28.8 80/87 -7 ....TTGGGCCT 115 4 -28.6 104/106 -9 ..TAATGGGC 114 4 -28.3 87/91 -9 ..TATTGGGC 98 1 -28.2 58/60 -6 .....TGGGCCTA 119 6 -27.4 95/97 -8 ...AATGGGCT 93 3 -23.7 47/50 -8 ...TTTGGGCT 85 2 -22.8 51/52 -8 ...TATGGGCC 82 3 -20.6 61/69 -9 ..AAATGGGC 74 2 -19.7 54/57 -8 ...ATTGGGCT 74 2 -19.7 35/39 -6 .....TGGGCTTA 74 3 -18.4 36/40 -5 ......GGGCTTTA 61 1 -17.5 31/32 -8 ...TATGGGCT 60 1 -17.2 27/31 -9 ..TTTTGGGC 71 4 -16.5 48/51 -10 .TTAATGGG 64 3 -15.7 42/43 -7 ....ATGGGCCA 63 3 -15.4 49/51 -8 ...TTTGGGCC 66 4 -15.1 61/64 -5 ......GGGCCTAA 62 3 -15.1 40/41 -9 ..ATTTGGGC 57 2 -14.9 37/38 -7 ....TTGGGCCA 57 2 -14.9 48/49 -9 ..ATATGGGC 61 3 -14.8 38/41 -5 ......GGGCCTTA 46 1 -13.3 42/42 -10 .TTATTGGG 61 5 -12.9 32/35 -9 ..TTATGGGC 49 2 -12.7 30/34 -5 ......GGGCCTAT 44 1 -12.7 31/32 -6 .....TGGGCCAA 53 3 -12.7 44/44 -9 ..AATTGGGC 56 4 -12.5 40/45 -7 ....ATGGGCCG 38 0 -11.5 32/34 -6 .....TGGGCCGA 44 2 -11.3 37/38 -6 .....TGGGCCTG 39 1 -11.3 31/32 -10 .TAAATGGG 50 4 -10.9 30/34 -5 ......GGGCCTTT 46 3 -10.8 38/39 -7 ....TTGGGCTA 34 1 -9.8 14/17 -8 ...GATGGGCC 32 1 -9.3 26/26 -6 .....TGGGCCAT 40 3 -9.2 37/38 -10 .ATAATGGG 36 2 -9.1 21/23 -5 ......GGGCCAAA 35 2 -8.9 25/25 -6 .....TGGGCTTC 34 2 -8.6 19/20 -5 ......GGGCTTTG 27 0 -8.4 13/15 -9 ..GTTTGGGC 27 0 -8.4 21/22 -7 ....TTGGGCCC 27 0 -8.4 13/23 -4 .......GGCCTAAA 37 3 -8.4 18/20 -8 ...CTTGGGCC 26 0 -8.2 23/24 -10 .TAATTGGG 32 2 -8.1 17/19 -9 ..CAATGGGC 27 1 -7.9 21/24 -8 ...CATGGGCT 27 1 -7.9 14/18 -9 ..TGATGGGC 27 1 -7.9 15/15 -6 .....TGGGCCTC 27 1 -7.9 23/23 -8 ...CATGGGCC 25 0 -7.9 25/28 -5 ......GGGCTTAA 34 3 -7.6 15/18 -6 .....TGGGCTTG 34 3 -7.6 23/26 -9 ..CATTGGGC 26 1 -7.6 13/18 -7 ....GTGGGCTT 25 1 -7.3 16/16 -7 ....ATGGGCCC 23 0 -7.3 20/30 -8 ...CTTGGGCT 23 0 -7.3 9/14 -9 ..GTATGGGC 23 0 -7.3 11/14 -6 .....TGGGCCCA 23 0 -7.3 24/48 -6 .....TGGGCCAC 24 1 -7.0 18/19 -7 ....ATGGGCTG 23 1 -6.7 13/13 -6 .....TGGGCTAT 21 0 -6.7 8/11 -4 .......GGCCTATA 22 1 -6.5 10/12 -4 .......GGCCTTAT 22 1 -6.5 13/13 -5 ......GGGCCGAA 20 0 -6.5 18/18 -4 .......GGCTTTAA 35 5 -6.4 18/21 -7 ....ATGGGCTC 19 0 -6.2 8/11 -8 ...GATGGGCT 19 0 -6.2 10/10 -10 .TATATGGG 24 2 -5.9 14/15 -10 .ATGATGGG 18 0 -5.9 9/9 -5 ......GGGCCTAG 18 0 -5.9 16/16 -11 TTTAATGG 37 7 -5.7 18/19 -9 ..AGATGGGC 19 1 -5.6 15/16 -10 .ATTATGGG 19 1 -5.6 11/11 -4 .......GGCCAAAT 19 1 -5.6 11/11 -5 ......GGGCCTGT 17 0 -5.6 14/15 -5 ......GGGCCTTG 17 0 -5.6 16/16 -8 ...GTTGGGCC 29 4 -5.6 27/28 -4 .......GGCCTAAT 22 2 -5.4 12/15 -4 .......GGCCTTAA 22 2 -5.4 18/18 -9 ..TCTTGGGC 18 1 -5.3 12/14 -7 ....TTGGGCTC 18 1 -5.3 9/10 -10 .CTATTGGG 16 0 -5.3 8/10 -4 .......GGCCTATG 16 0 -5.3 8/8 -5 ......GGGCCTGA 16 0 -5.3 12/12 -5 ......GGGCCATT 17 1 -5.0 12/13 -5 ......GGGCCTCA 17 1 -5.0 12/12 -9 ..TCATGGGC 17 1 -5.0 11/12 -6 .....TGGGCCAG 17 1 -5.0 12/14 -9 ..CTATGGGC 15 0 -5.0 8/10 -5 ......GGGCCATA 15 0 -5.0 13/13 -5 ......GGGCTTCA 15 0 -5.0 6/8 -9 ..ACATGGGC 20 2 -4.9 13/14 -8 ...AGTGGGCT 16 1 -4.8 9/10 -10 .AGTTTGGG 16 1 -4.8 9/10 -7 ....GTGGGCCT 16 1 -4.8 11/11 -9 ..ACTTGGGC 14 0 -4.8 8/8 -7 ....CTGGGCCT 14 0 -4.8 12/12 -5 ......GGGCCACA 14 0 -4.8 8/10 -7 ....TTGGGCCG 25 4 -4.6 26/26 -4 .......GGCCTTTA 19 2 -4.6 15/16 -5 ......GGGCCTTC 15 1 -4.5 11/13 -6 .....TGGGCCGG 13 0 -4.5 16/16 -10 .CTAATGGG 21 3 -4.3 16/18 -9 ..AACTGGGC 18 2 -4.3 12/13 -4 .......GGCCTTTT 26 5 -4.3 12/13 -6 .....TGGGCTGA 26 5 -4.3 16/16 -4 .......GGCTTTAC 14 1 -4.2 7/7 -5 ......GGGCCAAT 14 1 -4.2 11/12 -5 ......GGGCTTGT 14 1 -4.2 13/13 -8 ...TGTGGGCT 14 1 -4.2 7/7 -9 ..GATTGGGC 12 0 -4.2 7/9 -11 GGCTTTGG 12 0 -4.2 3/6 -5 ......GGGCCAAG 12 0 -4.2 8/9 -6 .....TGGGCCCT 12 0 -4.2 12/12 -6 .....TGGGCTGG 12 0 -4.2 8/9 -9 ..CTTTGGGC 20 3 -4.1 12/13 -9 ..AGTTGGGC 17 2 -4.1 13/13 -9 ..TAGTGGGC 17 2 -4.1 8/11 -8 ...AGTGGGCC 13 1 -3.9 8/11 -6 .....TGGGCTAG 13 1 -3.9 5/9 -8 ...ACTGGGCC 16 2 -3.8 14/16 -5 ......GGGCTTCT 16 2 -3.8 9/9 -6 .....TGGGCCGT 16 2 -3.8 15/15 -9 ..TGTTGGGC 26 6 -3.8 15/16 -9 ..CCATGGGC 12 1 -3.6 11/17 -9 ..GAATGGGC 12 1 -3.6 5/6 -4 .......GGCCGAAA 12 1 -3.6 6/6 -4 .......GGCCTCAA 12 1 -3.6 6/6 -4 .......GGCCTTTG 12 1 -3.6 7/8 -9 ..TTGTGGGC 12 1 -3.6 6/6 -9 ..ATGTGGGC 10 0 -3.6 7/7 -4 .......GGCCCTAA 10 0 -3.6 5/5 -8 ...TCTGGGCC 10 0 -3.6 8/10 -8 ...TGTGGGCC 10 0 -3.6 8/8 -10 .CTTTTGGG 20 4 -3.5 11/11 -7 ....TTGGGCTG 20 4 -3.5 13/13 -3 ........GCCTTAAA 17 3 -3.4 10/10 -4 .......GGCCATAA 11 1 -3.4 8/8 -5 ......GGGCCGAT 11 1 -3.4 7/7 -5 ......GGGCTTAG 11 1 -3.4 6/7 -6 .....TGGGCATT 11 1 -3.4 7/7 -6 .....TGGGCTGT 11 1 -3.4 7/8 -10 .CCCATGGG 9 0 -3.4 9/18 -9 ..GCTTGGGC 9 0 -3.4 7/10 -5 ......GGGCCAGA 9 0 -3.4 7/7 -5 ......GGGCCTCT 9 0 -3.4 7/7 -8 ...GGTGGGCC 9 0 -3.4 10/11 -7 ....GTGGGCCG 9 0 -3.4 7/9 -10 .TAACTGGG 9 0 -3.4 6/6 -10 .AATATGGG 26 7 -3.4 12/15 -8 ...GTTGGGCT 23 6 -3.2 13/14 -4 .......GGCTTTGA 16 3 -3.1 8/8 -11 CTAAATGG 10 1 -3.1 4/5 -10 .GATATGGG 10 1 -3.1 6/6 -4 .......GGCTTATG 10 1 -3.1 3/5 -7 ....GTGGGCCA 10 1 -3.1 8/8 -10 .GTTATGGG 10 1 -3.1 8/8 -6 .....CGGGCCAA 8 0 -3.1 5/5 -10 .CGTTTGGG 8 0 -3.1 3/4 -7 ....CTGGGCCC 8 0 -3.1 6/9 -3 ........GCCTATGT 8 0 -3.1 5/5 -4 .......GGCCTGTA 8 0 -3.1 6/7 -4 .......GGCCTTGT 8 0 -3.1 5/5 -5 ......GGGCCAAC 8 0 -3.1 5/5 -5 ......GGGCCGAG 8 0 -3.1 6/6 -5 ......GGGCTGAG 8 0 -3.1 4/4 -10 .GAAATGGG 13 2 -3.0 7/7 Cluster #1, n=6 -2 ..AAAGGAAA 134 18 -21.7 74/74 -3 .AAAAGGAA 138 21 -20.9 82/83 -1 ...AAGGAAAG 81 6 -17.2 42/44 -3 .AAATGGAA 93 14 -14.5 56/56 -2 ..AATGGAAA 86 14 -12.9 48/48 -4 AAAATGGA 72 17 -8.4 36/36 Cluster #2, n=47 -4 ...AGCCCAAA 85 2 -22.8 73/74 -3 ....GCCCAAAA 71 4 -16.5 56/60 -4 ...GGCCCAAA 66 4 -15.1 62/65 -3 ....GCCCAAAT 57 2 -14.9 48/49 -3 ....TTCCAAAA 84 12 -13.6 53/53 -4 ...TTTCCAAA 89 14 -13.6 50/50 -2 .....CCCAAATA 46 1 -13.3 30/30 -4 ...GGGCCAAA 35 2 -8.9 34/34 -3 ....GCCCAAAC 27 0 -8.4 24/24 -3 ....TACCAAAA 73 18 -8.2 53/53 -3 ....GACCAAAA 47 7 -8.0 26/26 -3 ....TTCCAAAT 48 10 -6.6 37/38 -4 ...TTACCAAA 60 16 -6.4 40/40 -1 ......CCAAATAA 35 6 -5.8 24/24 -1 ......CCAAATAT 46 11 -5.7 28/28 -4 ...TTCCCAAA 23 2 -5.6 16/17 -3 ....GGCCAAAT 19 1 -5.6 19/19 -2 .....GCCAAATT 22 2 -5.4 13/14 -2 .....CCCAAACT 16 1 -4.8 9/9 -5 ..TATACCAA 16 1 -4.8 13/13 -4 ...ATACCAAA 37 9 -4.7 24/26 -1 ......CCAAAGCC 12 0 -4.2 10/10 0 .......CAAATTTG 30 7 -4.2 14/28 -2 .....GCCAAAAA 40 12 -4.1 21/21 -3 ....GCCCAAAG 20 3 -4.1 23/23 -1 ......CCAAATGT 17 2 -4.1 10/11 -4 ...TTGCCAAA 29 7 -4.0 24/24 -4 ...TGGCCAAA 11 0 -3.9 11/11 -2 .....GCCAAAAT 19 3 -3.8 13/14 -3 ....GGCCAAAA 21 4 -3.7 21/21 -3 ....TCCCAAAA 21 4 -3.7 16/16 -5 ..ATTGCCAA 12 1 -3.6 6/7 -3 ....TGCCAAAT 15 2 -3.6 13/13 -5 ..CAGCCCAA 20 4 -3.5 10/10 -2 .....CCCAAAAG 20 4 -3.5 10/12 -2 .....CCCAAATG 20 4 -3.5 9/10 -4 ...CTTCCAAA 20 4 -3.5 18/19 -2 .....ACCAAAAG 24 6 -3.4 12/12 -7 AAATGGCC 11 1 -3.4 3/6 -5 ..CATTCCAA 11 1 -3.4 6/6 -1 ......CCAAAGTG 14 2 -3.3 9/9 -2 .....CCCAAACA 19 4 -3.3 10/10 -1 ......CCAAAAGC 10 1 -3.1 9/9 -2 .....CCCAAACG 8 0 -3.1 4/4 -5 ..CGGGCCAA 8 0 -3.1 5/5 -5 ..GGGACCAA 8 0 -3.1 2/4 -5 ..AATGCCAA 13 2 -3.0 6/8 Cluster #3, n=92 -4 ....TGGGCTTT 167 3 -44.9 131/136 -5 ...ATGGGCCT 147 5 -36.4 95/104 -5 ...ATGGGCTT 133 4 -33.7 78/81 -4 ....TGGGCCTT 117 2 -31.9 113/113 -5 ...TTGGGCTT 126 4 -31.7 72/77 -5 ...TTGGGCCT 115 4 -28.6 80/84 -4 ....TGGGCCTA 119 6 -27.4 80/92 -6 ..TATGGGCC 82 3 -20.6 35/43 -3 .....GGGCTTTT 76 2 -20.2 53/56 -4 ....TGGGCTTA 74 3 -18.4 45/48 -3 .....GGGCTTTA 61 1 -17.5 51/54 -6 ..TTTGGGCC 66 4 -15.1 29/35 -3 .....GGGCCTAA 62 3 -15.1 40/46 -3 .....GGGCCTTA 46 1 -13.3 45/45 -7 .TTATGGGC 49 2 -12.7 20/27 -3 .....GGGCCTAT 44 1 -12.7 26/29 -2 ......GGCTTTTT 48 2 -12.4 25/25 -3 .....GGGCCTTT 46 3 -10.8 46/47 -3 .....GGGCTTAT 32 1 -9.3 18/18 -3 .....GGGCTTTG 27 0 -8.4 19/21 -2 ......GGCCTAAA 37 3 -8.4 21/25 -2 ......GGCTTTTA 34 3 -7.6 24/25 -5 ...GTGGGCTT 25 1 -7.3 13/13 -3 .....AGGCTTTT 32 3 -7.1 19/19 -3 .....GGGCTTTC 28 2 -7.0 23/23 -2 ......GGCCTATA 22 1 -6.5 15/16 -2 ......GGCCTTAT 22 1 -6.5 19/21 -2 ......GGCTTTAA 35 5 -6.4 28/30 -8 TATATGGG 24 2 -5.9 10/12 -2 ......GGCTTTTC 20 1 -5.9 16/16 -3 .....GGGCCTAG 18 0 -5.9 15/16 -7 .AGATGGGC 19 1 -5.6 9/10 -5 ...TTAGGCCT 19 1 -5.6 10/18 -3 .....GGGCCTTG 17 0 -5.6 15/15 -2 ......GGCCTAAT 22 2 -5.4 10/13 -2 ......GGCCTTAA 22 2 -5.4 23/23 -2 ......GGCCTAAC 18 1 -5.3 9/13 -2 ......GGCTTAAA 18 1 -5.3 9/11 -2 ......GGCCTATG 16 0 -5.3 11/14 -2 ......GGCCTTTC 17 1 -5.0 11/14 -4 ....AAGGCTTT 34 7 -5.0 22/22 -1 .......GCTTTAAT 20 2 -4.9 12/12 -5 ...GTGGGCCT 16 1 -4.8 9/9 -5 ...CTGGGCCT 14 0 -4.8 7/8 -2 ......GGCCTTTA 19 2 -4.6 17/18 -3 .....GGGCCTTC 15 1 -4.5 14/14 -2 ......GGCTTTTG 24 4 -4.4 21/22 -2 ......GGCTTATT 21 3 -4.3 10/11 -2 ......GGCCTTTT 26 5 -4.3 28/29 -1 .......GCCTAATA 14 1 -4.2 4/7 -2 ......GGCTTTAC 14 1 -4.2 10/10 -2 ......GGCTTTGG 12 0 -4.2 12/12 -7 .CTTTGGGC 20 3 -4.1 7/13 -1 .......GCCTTTTA 20 3 -4.1 10/15 -2 ......GGCCTAAG 13 1 -3.9 7/11 -2 ......GGCTTTAG 13 1 -3.9 11/11 -4 ....TAGGCCTA 13 1 -3.9 10/20 -5 ...ACGGGCCT 11 0 -3.9 7/7 -3 .....CGGCCTTT 11 0 -3.9 6/6 -1 .......GCCTTATA 11 0 -3.9 7/8 -7 .CCATGGGC 12 1 -3.6 4/6 -1 .......GCCTATAT 12 1 -3.6 4/6 -1 .......GCTTTTAG 12 1 -3.6 8/8 -2 ......GGCCTTTG 12 1 -3.6 11/12 -5 ...ACGGGCTT 10 0 -3.6 6/6 -4 ....CGGGCTTT 10 0 -3.6 7/8 -3 .....GGGCTTAC 10 0 -3.6 7/7 -1 .......GCCTAAAA 27 7 -3.6 9/14 -2 ......GGCTTATA 15 2 -3.6 10/10 -3 .....TGGCTTTT 15 2 -3.6 15/15 -1 .......GCCTTAAA 17 3 -3.4 9/14 -3 .....AGGCCTTT 11 1 -3.4 11/16 -1 .......GCCTATAA 11 1 -3.4 8/9 -3 .....GGGCTTAG 11 1 -3.4 8/10 -4 ....TCGGCCTT 11 1 -3.4 5/6 -4 ....GAGGCCTT 9 0 -3.4 8/8 -7 .GCTTGGGC 9 0 -3.4 5/5 -1 .......GCCTAACT 14 2 -3.3 5/8 -1 .......GCCTTATT 14 2 -3.3 6/9 -2 ......GGCTTTCA 14 2 -3.3 11/11 -2 ......GGCTTTAT 21 5 -3.2 17/18 -2 ......GGCTTTGA 16 3 -3.1 12/14 -4 ....CAGGCCTA 10 1 -3.1 9/9 -1 .......GCTTTTGG 10 1 -3.1 6/6 -2 ......GGCTTATG 10 1 -3.1 6/8 -8 GTTATGGG 10 1 -3.1 5/6 -5 ...ACAGGCTT 8 0 -3.1 8/8 -4 ....CGGGCCTA 8 0 -3.1 7/7 -1 .......GCCTATGT 8 0 -3.1 6/6 -2 ......GGCCTTGT 8 0 -3.1 6/6 -6 ..TAGAGGCC 8 0 -3.1 3/4 -1 .......GCTTTTGT 18 4 -3.0 8/9 Cluster #4, n=6 -3 CCAAAAAT 114 6 -26.1 79/79 -2 .CAAAAATG 91 8 -18.1 47/47 -3 CCCAAAAT 59 6 -11.6 51/51 -3 CCATAAAT 32 6 -5.1 28/28 -2 .CATAAATG 27 6 -4.0 15/15 -2 .CCAAAATG 26 6 -3.8 16/16 Cluster #5, n=3 -3 .TTTCTATT 59 13 -7.5 56/56 -2 ..TTCTATTT 62 16 -6.8 39/39 -4 CTTTCTAT 28 4 -5.4 26/26 Cluster #6, n=9 -3 ...AAAAGGAA 138 21 -20.9 69/70 -5 .AAAAAAGG 128 20 -19.1 99/99 -4 ..AAAAAGGA 127 23 -17.2 97/97 -6 CAAAAAAG 88 16 -12.2 50/50 -4 ..AAAAAGGC 29 6 -4.4 25/25 -6 CCAAAAAG 35 9 -4.3 21/21 -5 .TAAAAAGG 32 8 -4.1 28/29 -4 ..AAAAAGGG 38 11 -4.1 34/34 -3 ...AAAAGGGA 25 5 -4.1 15/15