Cluster #0, n=100
-5	....TTTCCTTTT	191	9	-36.8	191/191
-4	.....TTCCTTTTT	144	10	-24.8	146/146
-6	...TTTTCCTTT	114	4	-23.7	126/129
-3	......TCCTTTTTT	116	5	-23.1	106/106
-5	....TTTCCATTT	113	5	-22.4	109/109
-6	...CTTTCCTTT	93	2	-21.3	87/87
-2	.......CCTTTTTTG	78	1	-19.2	54/57
-4	.....TTCCTCTTT	67	2	-15.0	63/64
-4	.....TTCCATTTT	75	7	-12.0	74/74
-2	.......CCATTTTTG	63	4	-11.9	33/35
-2	.......CCTCTTTTG	47	1	-11.6	29/29
-3	......TCCTCTTTT	46	1	-11.3	39/39
-7	..ACTTTCCTT	42	0	-10.8	29/30
-4	.....TTCCCTTTT	47	2	-10.2	29/47
-5	....TTTCCCTTT	51	3	-10.1	53/53
-4	.....TCCCTTTTT	40	1	-9.9	27/38
-7	..TTTTTCCTT	64	7	-9.7	58/61
-5	....TTTCCTCTT	51	4	-9.2	45/47
-4	.....TTCCTTTTC	40	2	-8.6	41/43
-3	......TCCATTTAT	39	2	-8.4	26/26
-1	........CTCTTTTGG	30	0	-7.9	15/15
-4	.....TGCCATTTT	36	2	-7.7	34/34
-5	....TTGCCATTT	40	3	-7.6	40/40
-6	...TTTTCCATT	30	1	-7.4	31/32
-6	...ATTTCCATT	33	2	-7.0	32/33
-6	...CTTTCCATT	33	2	-7.0	27/28
-3	......TCCATTTTT	54	9	-6.5	42/42
-3	......TCCTTTTTC	31	2	-6.5	29/29
-4	.....TTCCATTTA	31	2	-6.5	29/29
-6	...CTTTCCTCT	24	0	-6.5	18/18
-2	.......CCTTTTTGG	34	3	-6.3	17/20
-7	..CTTTTCCTT	30	2	-6.3	31/31
-6	...GTTTCCATT	30	2	-6.3	29/29
-7	..TCTTTCCTT	44	6	-6.3	40/41
-6	...CTTTCCCTT	23	0	-6.2	22/22
-2	.......CCTTTTTCT	23	1	-5.8	15/17
-7	..ATTTTCCTT	21	0	-5.8	22/23
-5	....TTTCCTTTG	21	0	-5.8	28/28
-9	TTTCTTTCC	41	6	-5.7	21/23
-2	.......CCTTTTTTT	43	7	-5.5	48/49
-3	......GCCATTTTT	22	1	-5.5	13/14
-3	......TCCTTTTCT	22	1	-5.5	22/22
-5	....TTTCCTTTA	30	3	-5.4	30/30
-4	.....TACCATTTT	21	1	-5.3	15/15
-8	.TCTTTTCCT	21	1	-5.3	22/22
-4	.....TTCCTTTTA	29	3	-5.2	28/28
-6	...TTTGCCATT	29	3	-5.2	22/23
-3	......TCCTTTTTA	32	4	-5.1	28/28
-2	.......CCTTTTTTA	28	3	-5.0	22/22
-8	.TTTTTTCCT	45	9	-4.9	35/36
-8	.AAGTTTCCA	19	1	-4.8	8/12
-5	....CTTCCATTT	19	1	-4.8	21/21
-7	..TTTTGCCAT	18	1	-4.5	13/13
-5	....TTACCATTT	29	4	-4.5	19/19
-8	.AACTTTCCT	22	2	-4.5	10/11
-6	...GTTTCCTTT	22	2	-4.5	21/21
-7	..CCTTTCCTT	15	0	-4.3	14/14
-3	......TCCTCTTTC	15	0	-4.3	11/14
-4	.....TTCCATTTC	21	2	-4.3	24/24
-4	.....TTCCTTTTG	21	2	-4.3	25/25
-8	.TTCTTTCCT	33	6	-4.2	23/23
-2	.......CCCTTTTTG	16	1	-4.1	6/9
-2	.......CCTTTTTAA	16	1	-4.1	12/13
-3	......TCCATTTTA	16	1	-4.1	11/11
-4	.....TGCCTTTTT	16	1	-4.1	13/14
-8	.TTGTTTCCT	14	0	-4.1	10/11
-6	...ATTGCCATT	13	0	-3.8	12/12
-3	......GCCTTTTTT	13	0	-3.8	11/11
-7	..TCTTTCCCT	13	0	-3.8	9/9
-4	.....TTCCTTTGT	13	0	-3.8	12/12
-6	...TTTACCATT	19	2	-3.8	10/10
-4	.....ATCCTTTTT	31	6	-3.8	18/18
-6	...ATTTCCTTT	28	5	-3.7	30/30
-4	.....TTCCATTTG	18	2	-3.6	18/18
-2	.......CCTTTTATA	14	1	-3.6	8/8
-6	...GTTTCCCTT	12	0	-3.6	12/12
-3	......CCCTTTTTT	26	5	-3.4	16/20
-7	..ACTTTCCAT	17	2	-3.4	11/11
-4	.....GTCCTTTTT	13	1	-3.3	10/11
-8	.TTCTTTCCC	13	1	-3.3	6/7
-9	TTTATTTCC	13	1	-3.3	7/8
-7	..CTTTTCCAT	11	0	-3.3	8/10
-4	.....TGCCATTTC	11	0	-3.3	9/9
-4	.....CTCCTTTTT	16	2	-3.2	10/10
-8	.CTCTTTCCT	16	2	-3.2	13/13
-9	CTTTTTTCC	16	2	-3.2	8/11
-7	..GTTTTCCTT	16	2	-3.2	17/17
-1	........CATTTATGG	12	1	-3.1	9/9
-2	.......CCTTTTTAG	12	1	-3.1	7/8
-7	..TATTTCCAT	12	1	-3.1	11/11
-9	TATTTTTCC	12	1	-3.1	10/10
-3	......TCCCTTTTC	12	1	-3.1	7/11
-3	......TCCTTTTCC	12	1	-3.1	7/10
-9	ATTGTTTCC	10	0	-3.1	6/6
-1	........CTCTTTTGC	10	0	-3.1	5/5
-8	.TATTTTCCT	10	0	-3.1	9/10
-3	......TCCATTTTG	10	0	-3.1	7/7
-4	.....TCCCTTTTA	10	0	-3.1	6/11
-5	....TGTCCTTTT	10	0	-3.1	5/7
-7	..TGTTTCCAT	10	0	-3.1	9/9
Cluster #1, n=43
1	......TTTTGGTAA	86	2	-19.5	76/76
0	.....TTTTTGGTA	91	3	-19.4	95/95
-3	..CCTTTTTTG	78	1	-19.2	47/48
-2	...CTTTTTTGG	92	4	-18.5	93/93
-1	....ATTTTTGGT	64	1	-15.7	71/71
-2	...CATTTTTGG	60	2	-13.3	59/59
-2	...TATTTTTGG	62	5	-10.8	69/69
-2	...CTATTTTGG	33	0	-8.6	34/34
-1	....TTTTTTGGT	57	7	-8.3	64/64
-2	...CTCTTTTGG	30	0	-7.9	26/26
-1	....TTTTTTGGC	41	3	-7.8	44/44
2	.......TTTGGTAAT	34	2	-7.2	27/29
0	.....TTTTTGGCT	26	0	-7.0	29/29
1	......TTTTGGCAA	31	2	-6.5	25/25
-2	...CCTTTTTGG	34	3	-6.3	30/30
1	......TTTTGGTAT	32	3	-5.9	35/35
0	.....TTTTTGGCA	32	3	-5.9	30/30
0	.....TTTTTGGGT	27	2	-5.6	25/27
-2	...CACTTTTGG	20	0	-5.5	20/20
-1	....ATTTTTGGC	18	0	-5.0	19/19
-3	..TCTATTTTG	18	0	-5.0	14/14
0	.....TTTTTGGTC	19	1	-4.8	20/20
2	.......TTTGGTAAG	17	0	-4.8	15/15
2	.......TTTGGTAAA	30	4	-4.7	22/22
0	.....CTTTTGGTA	18	1	-4.5	19/19
-1	....ATTTTTGGA	32	5	-4.5	32/32
-1	....TTTTTTGGG	32	5	-4.5	31/31
-1	....ATTTTTGGG	22	2	-4.5	26/26
1	......TTTTGGGTA	17	1	-4.3	12/13
-1	....TCTTTTGGT	24	3	-4.1	21/23
-5	TGCCTTTTT	16	1	-4.1	6/8
2	.......TTTGGCAAA	16	1	-4.1	9/10
0	.....ATTTTGGTA	23	3	-3.9	18/18
1	......TTTTGGTAG	15	1	-3.8	17/17
-4	.GCCTTTTTT	13	0	-3.8	8/8
0	.....TTTTTGGGA	22	3	-3.7	19/20
-1	....TATTTTGGG	14	1	-3.6	10/13
-1	....CTTTTTGGT	21	3	-3.5	23/23
0	.....TTTTTGGAA	33	8	-3.3	29/29
-3	..GCTTTTTTG	12	1	-3.1	8/8
3	........TTGGTAATG	12	1	-3.1	7/8
1	......TTTTGGGGT	12	1	-3.1	7/7
1	......TTTTGGCTC	10	0	-3.1	10/10