--- Makefile	2016-07-01 23:52:59.348747668 +0400
+++ Makefile	2016-07-02 00:12:15.824595481 +0400
@@ -6,13 +6,6 @@
 # to build Inchworm and Chrysalis with the Intel compiler.
 #
 
-ifeq ($(TRINITY_COMPILER),intel)
- INCHWORM_CONFIGURE_FLAGS = CXX=icpc CXXFLAGS="-fast"
- CHRYSALIS_MAKE_FLAGS = COMPILER=icpc
-else
- override TRINITY_COMPILER=gnu
-endif
-
 
 all: inchworm_target chrysalis_target trinity_essentials
 	sh ./util/support_scripts/trinity_install_tests.sh
@@ -20,9 +13,10 @@
 inchworm_target:
 	@echo Using $(TRINITY_COMPILER) compiler for Inchworm and Chrysalis
 	cd Inchworm && (test -e configure || autoreconf) \
-                && sh ./configure --prefix=`pwd` $(INCHWORM_CONFIGURE_FLAGS) && $(MAKE) install
+	            && sh ./configure --prefix=`pwd` CC=${PREFIX}/bin/gcc $(INCHWORM_CONFIGURE_FLAGS) CXX=${PREFIX}/bin/g++ CFLAGS="-fopenmp" CXXFLAGS="-fopenmp" && $(MAKE) install
 
 chrysalis_target:
+	echo "cd Chrysalis && $(MAKE) UNSUPPORTED=yes $(CHRYSALIS_MAKE_FLAGS)"
 	cd Chrysalis && $(MAKE) UNSUPPORTED=yes $(CHRYSALIS_MAKE_FLAGS)
 
 
@@ -55,9 +49,9 @@
 test_gg_trinity:
 	cd sample_data/test_GenomeGuidedTrinity && make test
 
-test_all:
-	cd sample_data/ && make test
-	cd sample_data/test_Trinity_Assembly && make test_full
+#test_all:
+#	cd sample_data/ && make test
+#	cd sample_data/test_Trinity_Assembly && make test_full
 
 test_clean:
 	cd sample_data/ && make clean