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HCHHCPHCXHtEHHMtHHE(HH[]A\A]@H9t1HB(H9C(@Hs@H{0HD$HHD$H[]A\A]@f.UHAWAVAUATLxSHIHHXH`dH%(HE1H`HhHHHHHHuAHHH9tHEdH3%(He[A\A]A^A_]f.LH`HhILLLXLLLLHLLHLHtHLHxL9@HXL)HHH#`H9HH@ H+G@H9kH8IHtHH`HhILLLID$I9H@H0HH(H H HH@LIID$I9IE M}0HPIE(H@IE8H8H8IHtHHXHPH9HvH8IHtH HXHHHx`@HLHXH8L@HHLpIELHH@bH`HhLLH@IH L9fH0H(H5 H(LH5HIH8LH5 HIHPLH5HIH@LH0H M6HpL LHLH H;tH0HxL9H H5H=@L0LH(H5'HhH(H IwM6L LHLH H;tH0UL@LI}H5HhI}H5HHPHXHH#`HPHHp H+r@H5HIL IuLHPL HPLHH IL9tLKH@IIL9tHHH9tLHIHtHLIH IIL9tLIH H IHH9tH0IIH H HH9uIm@f.UHAWAVAUATISHHHHdH%(HE1HHHHǃHǃHHIuƀH0HHX(HrHGHH0]HHH0H8HHyHAHHH]HƅHHH8HHtH1HHHH0HH9tHL@HDžHDžHHIDžHDžHDž0HPH H(LhLLk(HLhL` HpH5Lx(HH0H5HS@@8HpI6HH=HP0HV(HHpHPHx@HHHHHHHHPHHLPLXM9HLPHHIFHHHHH5LHHLHHHPG[IF0I~ HpIt$ IT$(H&[HxIFPI~@!HHH9xDžtHH9xH HpHI4$IT$HUIF0I~ IF It$ IT$(HTI@I@M9uHPLXL9HHHHHCHH0HH0HPHTHHHPH0H8HHtH6 HHHHH0H8HGHH@THHE1HDž`HDžhHDžpHH)HHHt,HH9DHHHIHH9H`HhHp HHHfDHtoHHH9uHHK@HH)DžHDžHHHHTHDžL9HhE1L8HHL(HXHLh HX(L`0HHu)fHJHtHHz(H9rHJHuHN@HH9H9@@HIHN@HH`HhHH)HL9>HHHX8Hx0HHH9tHHH9n HL`@MaLHH@HLHMIMmMtOM}(LM9IFHtI} HuM)II|DxLMmMuH;HHs LL{xHH{@H`H{`HC`HhHHDž`HChHpHDžhHCpHDžptHLHǃLLHHǃHtpHHHHHLhHHHHDžHDžH@HHH1Hx8H`HtHH@HH9tHHHHHHHHjHXZHtHHtHHtHH0HH9tH@HI9`LXHPI9tGHIH{ HC0H9tH;HCH9tH@I9uHPLHtHH HH9H0HH1HDžHDžHDžHH)HIHHt5HH9 HHHHHH)IHH9HHHtHLHHHLHHHtHHtHHtHHEdH3%(S He[A\A]A^A_]@II9tLHHHHHHH9HHPIL9tHHHHHH0HH9{qHHHPHH9tHHHHx8H`HtHH@HH9tHbH H5H=VHHHuHHH HHHdHPIHL9lbH H H5H=LH;HHHHaHHHHHpIF0H9 HHIFPH9tHHHHPH?5HHH@ HHH@ HHH@ 1@0 General ~ActionHandler /srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/assembly_graph/core/action_handlers.hppAUATUSHHdH%(H$1HHH8HtH1HuAH{HH9tH$dH3%(Hĸ[]A\A]f.Ld$ Ml$LH5LHSHsLLmIt$HHHL $LH1L0H<$H9tL0SHH߾0[SHH~H5H9t?*tuHC[1[SHH~H5H9t?*tuHC[1[SHH~H5H9t?*tuHC[1[basic_string::_M_construct null not valid/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/assembly_graph/core/order_and_law.hpp/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/assembly_graph/paths/bidirectional_path.hpp/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/modules/genome_consistance_checker.cpp was not unique due to the references, excluding Too small a portion mapped. Edge not usedSame chromosome large forward jump misassemblyMisassembly weight regardless of dists: position in genome ordering: Skipping fake(circular) misassemblyLocal misassembly between edges: Skipping fake misassembly - connected Extensive misassembly between edges: mapped less than half of the path, skippingconstructing edge order for chr Looking on long reads, last long edge: total_mapped >= mapping_info.secondis potentially misassembled! mappings: Fake(linear order) misassembly on edge /srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/io/reads/single_read.hpp!chr_infos_.count(info.name())=== Stack Trace ===AWAVH5AUATH=USHXdH%(H$H1HHH@HHr{87sCH=HHHHÉIHōCL%L=Ml*DsCH=HHL9H]HtbHH=HHI$H@IH{8uHH H@0L9tHwI$HxLw LH$HdH3%(uKHX[]A\A]A^A_HHH H@0H9Hptr_.get() == rhs.ptr_.get()gap_len_[0].gap == 0mappings.size() > 0GenomeConsistenceCheckerEdge weight len cov no chromosome positionIsUnique(e)chrs.size() == 1Chromosome index constructing mapping graph verticesPos: init_range mapped to edge ( range Large gap Positioning edge Most likely chromosome . Mapped bp: backwards forward start end genome_info_.Multiplicity(e1)genome_info_.Multiplicity(e2)Next genomic edge prev Backward jump misassemblyInversionmisassembly, chr edge size misassembly Something else misassemblyfor lib ISNext weight Prev weight of long reads: Misassembly weight Gap in genome / gap in path: / and Jumped over uniques of total length: Ranges: Genomic positions: resp.0 length path in GCChecker!!!For path length mappings.size() <= 1Presumably unique edge with multiple mappings!Sorting positions:vector::reserveConstructing reference labels!answer.count(e)%luorder: mapped range: : init range: First candidate:Additional weight of candidatesNo uniqueness infoLooking on lib IS start endPath length ended at the chromosome ended, last unique: Assuming gaps of length > unresolvable..Rough estimates on N50/L50: with len length mp_range - EdgePositionHandlerAdding new action handler: 0_seq_.size() == qual_.size()1_Spelling label @Gt~ @ct0@Tt@au0fD@At~ @Ct1@gt@tt1Ð@v1@t@wFHHcHfD1Dff.f.HGHHuHH 6HHЃ>H@HOHHH 6HHЃ>HЃSHH@HCPH9tH{ HC0H9tH;HH9t [fD[/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/sequence/range.hppend_pos >= start_posHGHH9rH)SHHCHH9rH)[H H5H=[, )USHH5HHHuHH5HHHuHH5HHHH[] --> ATUSHH5IH3LH5HHHsHH5HHH5HH5HHsHH5HHHsHH5HL[]A\SHH HC0H9tH;HH9t[[/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/modules/genome_consistance_checker.hppidx < path_.size()HW HG(H)HH9sHH2HT2fDHHt$H<$H<$Ht$HW HG(H)HH9sHH2HT2HH H5H=;SHHHtH;Ht[[UIHHHATSIHL`Lht#)p)M)U)])e)m)u)}dH%(H81HFH HDž Dž$0H)HEH\$H(H@HHH0AIT$LHI$HcHH8dH3<%(Lu He[A\]HW1H;VtfHҸtHH6H?Hbasic_string::appendATUHSHHIHH+MH9w[HLHHSHHHPH9t/H HHHKHHHKHH@@H[]A\Do@CH=ATUSHoHH9t&IDH;HCH9tH H9uI$HtH[]A\f[]A\ATUSHoHH9t8IDH{ HC0H9tH;HCH9tH@H9uI$HtH[]A\[]A\AWAVE1AUATIUSHHH^H+HHGHGHHHtHH9HILM<$M|$I\$LmLHmI9tHHt6LsHL3HuHUHHC0H{ HC Hu HU(HH@H@I9uI\$H[]A\A]A^A_H;HL9tHHL9tLI@HI<$HtH) W(]AWAVIAUATH5USHHLl$H|$dH%(HD$81HIELHHD$II;_]H0HT$Ht$H|$H5HHHsHIH5HH5HHsHH5HIHsLH5HIH5LH5LHsLH5HIHsLH5HH5HHT$H A1LH0M9wH|$H5H|$IL9tHL$8dH3 %(HD$uHH[]A\A]A^A_H|$IHL9tH7 AVAUIATUISHHLsL3HCHCIt$HHHH+CH9w+HLHIT$I4$HH[]A\A]A^H=H;HI9tH :OATUSHoHH9t&IDH;HCH9tH@H9uI$HtH[]A\f[]A\/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/assembly_graph/paths/mapping_path.hppidx < size()H(HHFH)HH9sIHHHHFHL LAH0HHHPH@LLGHwHOHG(HW HH(fHT$Ht$H|$Ht$HT$H|$HHFH)HH9rH H5H=AWAVIAUATIUSHHHHHGH)I)HHL,L9HIHT$HT$IMt!IGH2LHD$IHBHHHUML9HJ LHBH)IHt20LI5H HHJHHHJH@H@H H H9t:HtHJH HHH9uoBALH0fDIIMHUI L9tIL$ ID$H)HJt"0LH0fH HHJHHH@H@HJH H H9t"HtHJH HHH9uoBHGH]HILeI9t(I<$ID$H9tI L9uH]HtHILuL}MLuH[]A\A]A^A_ÐHI9vHIME1HMt LI?H;|$tHHWAWAVIAUATIUSHHHOHHI)H)HHH4IH9LH$H]HMMH$III)MtHII9t LHLHL$L$HL$L$IODM)L9tLLLIMHtHLmLuL}H[]A\A]A^A_L<FfDHH9-HuME1E1>idxs.size() == 1AWAVAUATLg@USIHLH8LwHdH%(HD$(1HD$HD$MHD$ t$L@HH@HtH9X(sH@HuHD$E1HD$MLt#LHH@HtH9X(wH@HuH9t0L9|$ tiMtHE0IIL|$HHH|$I)IuRHHL$(dH3 %(HH8[]A\A]A^A_@H|$HU0LL|$MuH@H|$HD$H)HtH H5H=EH|$HHtHH=SHtot+[fGPWuHPC PS HPC uHH[H@Ht3ATIUSHHsLHkHHHu[]A\@LHH~LNLFLH)HHHxTHH?~2MHH)I8L@LHHxHLHfIHxLHL@H@HHHLHH~LNLFLH)HHHx\HH~2MHH)I8HL@LHHxHLHfDHHxLHI L@HHHHHt3ATIUSHHsLHkHHHu[]A\@AWAVLwAUATLnUSIHHGLwLw HnGHG(L91Ht]@HM@f.HCHtHHS H9rHC1Hu@u"H9r9HL9HtnI\$HuLI9\$tHHM@HP H9sI9AuM(HU@ALHHP HID$(HL9HuHL[]A\A]A^A_ÐHC H9E@AIt$HLH Ht3ATIUSHHsLHkHHHu[]A\@Ht3ATIUSHHsLHkHHHu[]A\@HtCATIUSHHsLHs@HkH{0HHHu[]A\HSHHHHtHHtHHHH{pH{XHtH߾[HSHHHHtHHtHHHH{pH{XHt [fD[HSHHHHtHHtHHHH{pH{XHt [fD[HSHHHHtHHtHHHH{pH{XHtH߾[Ht3ATIUSHHsLHkHHHu[]A\@AWAVLwAUATIUSHHH_Ht_LFfHCAHtHH{(I9rHCE1HuEIu$I9wAHH1[]A\A]A^A_LH9]toHIMD$Hx(HI9vM9AuV0Ao$LLHD@ HHE(HHغ[]A\A]A^A_@IAM9tE1IE(I9D$AHGHUSHoHHN H@HtH9H(rHPvHHHuH1[]HpHu%DHHvHtH;N(rHvHuDHtH;J(w5HHRHuH9t1fHHH9uHH[]DHR1AWAVAUATLgUSH(H_dH%(HD$1L9teII1If.H{xLL,$Lt$HHI9HuHL$dH3 %(HuH([]A\A]A^A_fD1AUATLgUSHH_HtYHM IH[HtH{ HyH[HuM9t&Iu HxHL[]A\A]HM[L]A\A]/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/utils/stl_utils.hppit != from.end()SHHH9tH@[H H5H=Fchr_names.size() == 1AWAVAUATLgUSHHH_HD$ H<$HD$ dH %(HL$81L9HD$(HD$0HD$II1L|$fHI9HtdH{xLLl$Lt$HtH9l$0Ht HEHHEHs HS(HHl$(H HHl$(I9HuHt$ H)H unH<$Hl$(H\$ IH9t"H;HCH9tH H9uH\$ HtHHL$8dH3 %(LulHH[]A\A]A^A_fHt$ HD$(H)H vH H5H=wDH|$HS HHl$(H|$HHH|$ HHoQ2bZ ! _ %     T  !]vRl  5=  k -    ;    :-"\u5L-5q    8  >   `!:  (:(&&&&% (  :( % & % % % R'&(Y('(c(((b((((e(((A%%4'&R''R''  6'!'!:"%"'"A#%$$%ItpvP{   B L  cXMQBfLN')7J@<''! !  :2 :y%u1!()))* * * ) ' ( ' ('('('(#))) ( (!(!(!(""("(##'''''''''''(9t  B  <  =/ 8      ,K    U     ,(r>!   M:`e  -  m  q`  E }    +     224551266555 5 5 5 . /5$/00111116C6653364 /!4&3&4(6(/2)3,2,2--4.1111164/4555,Jh=h/W   ,   , 1MC0O}!P/O+1        HtKATIUSHHsLH{ HC0HkH9tHHHu[]A\f.AWHGAVAUATUSHH(HGHG HGH^HD$HFGHG(H9HD$AE1HC MHD$@L{(Lk fDIFHtKIMf(M9LIFHtIv LuLL)H= H=|xIF1HuMuCHt$I~ xQHH;D$HLuHC HD$MRLt$L9utLMIML9l$Au`@IHx H@0ID$ Hs HS(HHL$ALLHE(ZH(H[]A\A]A^A_fDH|$Iu AHHuHHHLHHt3ATIUSHHsLHkHHHu[]A\@Ht3ATIUSHHsLHkHHHu[]A\@AWAVAUATUSHHHHuH?IHI)H)HHH IH9LHT$H}HuLx HT$IIMtoAEoBAEH9t?LHHtooBAH H H9uHG HH)HHM|@H9t=HLDHtooBAH H H9uH H)HM| HtLeL}LuH[]A\A]A^A_ÐHIHH9HuA E1E1HtKATIUSHHsLH{0HC@HkH9tHHHu[]A\f.HtKATIUSHHsLH{ HC0HkH9tHHHu[]A\f.AWAVAUATUSHH_H;_t(HtHHHH_H[]A\A]A^A_fDIL+7IHLHHHIH9LIMtI$ILeIM)I9tLLLHEKL5II)H9tHLHHIMtLLmMLuLmH[]A\A]A^A_fAeDHH9ME1E1HIHI2ObservableGraphAction handler removed/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/assembly_graph/core/observable_graph.hpp wasn't found among graph action handlersAVAUATUHSH=HHdH%(H$1HU8HM0HH)HHHHH9UH9YHySH;YHyEHHH;Yu3H;Y &H;XlH;XrH;XxHHA H9HuHH)HHHHH8HHH1Ll$ LMeH5LHSHsLHH5HIuHHmHL $LH1H(H<$H9tL1[HfH9&HwH9t H)HU8HHU8H8IHtH1u>H=H$dH3%(Hİ[]A\A]A^@Ll$ LMuH5LHSHsLHH5HIuHM$$HL $LH1L%H<$H9tL+H;HH;HH;@Hy(Hy0Hy8HHyvRemoving action handler: AUATUSHHdH%(H$1HHH8HtH1HuI{(tC(H{0HHH$dH3%(Hĸ[]A\A]fDLd$ Ml$LH5LHSHsLLmIt$HHHL $LH1L﹤H<$H9tL(SHH߾8[USHH_HtQD@HCAHtHËK A9|HCE1HuEIu1HA9HOIOH[]H_1H9_HtHHIDEH HAUHGATUSHIHH9tD*D;n H};HGH9Ht#HD;h H~hHxHEHEH[]A\A]Ð~^HO 1H9HtHD;h H})H{HEHDH(t H_ 9C |&HLH[]A\A]HH1[]A\A]HH1[]A\A]AWAVIAUATIUSHHHOHHI)H)HHH4IH9LH$H]HMMH$III)Mt AI9t LHLHL$L$HL$L$IODM)L9tLLLIMHtHLmLuL}H[]A\A]A^A_DL<FfDHH9-HuME1E1>HGH;GtHtHHGHHAWAVMyAUATLo8USHHXHG@LoHdH%(HD$H1HGhLoPHGpH7WHGxHIiO LGHGHG HG(L9G8HGXGhHLJHLJHLJHLJHLJHLJHLJIE1DLMt$(L9IuMfI*l$HU(Hs01Ht$HfHH*$$U MfIH@Ht9P }H@HuM9tA;W }e0Lt$L|$INjE Ht$H|$IW IG(AG HI9t H+LLHCX$H^D$AG(I9HteHU(HC@HHfHH HH*X$ M:DLHD$HD$IfDLHt$@HD$@Ls0LLHt$8HD$8LHHSH@)Ht$0E1Ht$Ht$(Ht$f.fH*fHY*XfH*^HHt$LLs0\BX $D$0HL$Ht$BX D$(HIHSH@)9|IHPHfHH H*X;fHfHH H*XAfHD$HdH3%(uGHX[]A\A]A^A_Ð1B A9G @LfHAL H*XD$HHHtHHtHspH{`Hs@LH{HtHAWAVIAUATIUSHH8LBh Bxf.L,E,,Ht$ LD$D$A1HȅHЉL$(T$ T$,HHHt$ HCHLD$D$H{PHHLHsLc(C@HCHFD{HHC HcD$ HHC0HcD$(HHC8HLHH5HCHP I]IEH8[L]A\A]A^A_\HL,I1HHHAWAVIAUATIUSHH8LBh Bxf.L,E,,Ht$ LD$D$A1HȅHЉL$(T$ T$,HHHt$ HCHLD$D$H{PHHLHsLc(C@HCHFD{HHC HcD$ HHC0HcD$(HHC8HLHH5HCHP I]IEH8[L]A\A]A^A_\HL,I1HHHAUATLgUSHH_HtYHM IH[HtH{ HyH[HuM9t&Iu HxHL[]A\A]HM[L]A\A]AWAVHAUATIUSIHHMD$H?LI)H)HHHmH IH9qLHT$I<$MD$HX0HT$IIMtoAoBAFoB AF H9txHG0HHLH)HH HHHH!HD@HL fDHHtooBCoB C HK0H0H9uH`L9tdHE0HI)H ILHI!KD@HH@HtooFCoF C H0H0H9uHtM,$I\$M|$H[]A\A]A^A_fDLMtLIMnInH[]A\A]A^A_f.HHoB@ f.HH9HuA@11/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/assembly_graph/handlers/edges_position_handler.hppthis->IsAttached()AWAVAUATUSHdH%(H$1~(H|$8HFXH~PHHHH@HtH9H(sH@HuH9|H9J(rLbHHB8HD$@HD$HHD$PHD$0I9HD$`H$HD$ H$HD$fI\$XID$HHD$H9xHD$ HH$HD$@HD$(@HH$HFH$H$HHFHDŽ$fo$Ƅ$F fo$F0H@Ht$HH9tH|$`H;<$tHH;D$HIt$ IT$(H$H|$ HHD$`Ht$`HT$hHC8H|$L{ Ls(HLk0H$HD$Ht$HH;t$PHD$L$L$L$H$HH$-HFHH$H9fo$FLH;D$0IZHL$@HT$HHD$PH\$8H HSHCH$dH3 %(HD$8H[]A\A]A^A_DH|$(HT$IH$~fHD$8HH@H@fHL$H4$H4$HL$~(H H5H=e111*HT$H$HHH9tHT$ H|$`HH9tLHHLl$@HLl$@AVAUIATUISH_HugHC1Ht$HHk LHyHCHu܄Iu.LH1҅HHHIH[]A\A]A^H_1I9]HtHIHh HAVHGAUATUISHHH9Ln HHLx+LLI1҅HL[]A\A]A^LuI9LtHHx LIyNI}HALEIDH[L]A\A]A^H(tH_ HE1H{ HxHLH[]A\A]A^@HE H9tGHHT$Hp LIyH{HT$IEH{IHIEDE1HAWAVIAUATIUSHHHOHHI)H)HHH4IH9LH$H]HMMH$III)MtHII9t LHLHL$L$HL$L$IODM)L9tLLLIMHtHLmLuL}H[]A\A]A^A_L<FfDHH9-HuME1E1> addedVerification of expression 'false' failed in function ''. In file '' on line . Message ' has already been added'.AUATUSHH=HdH%(H$1Ht$H8HtH1H>Hs8HK0II)LIHM+HT$H;H9QHAH;QHAIIH;Qu4H;Q tzH;PpH;PvH;P|HHA I9uHL)HHHqHQHH9C@u.HT$H{0,HDH9oH9C@tHtHT$HHHC8H=H$dH3%(H[]A\A]Ld$0Ml$LH5LHD$LHPHpH5HLmHl$It$HHLL$LH1LH|$H9tLHA(HA0HA8HT$LH9HT$I9tIHT$I9tI@LIKHALd$0I\$LH5HߺH5HߺH5HߺH5HߺH5Hߺ H5HߺlH5 HH߾H5 HHH5HߺHD$HHPHpH5HHH5HH\$It$HHT$Ht$H=HH|$HCH9tIt$HHHT$Ht$H=HH|$H9tH=H=H H5H=USHH_HtaHL DHCAHtHHC H L9wHCE1HuEIu1HI9HGIGH[]H_1H9_HtHHHUIHL HP H AUHGATUSHIHH9HHL HF L9 vIHGH9Ht.HHH@ L9 HzHEHEH[]A\A]@s~HO 1H9HtHHH@ L; s:H{HEHD@H(tH_ HHC H H9 w.HLH[]A\A]fHH1[]A\A]HH1[]A\A]AWAVAUATIUSHH8HL$Lt$dH%(HD$(1HT$1LHvHFL,MCI]ILD$HK )HH$HH 1IHHHuI9I9uHCH9D$uHsLLD$LD$tIEHHhH]L}Mt$AD$ID$Mt$Mt$ L9ID$(tjfDHS LLHIt=H@I9@@tv(HS @LHHP LID$(HI9HuHt$(dH34%(Lu`H8[]A\A]A^A_f.HH*HS IE H H9 @kIt$HLHAWAVIAUAT@USHHIHoC IHs@ HoC0@0ID$A$ID$Il$HkHtTM@oE H@ oE0@0EHCHCI]LkHuHu$HmIHuHL[]A\A]A^A_fDLHLHC@LLLID$[HLLHHAUATUSHH8dH%(HD$(1~(AHFXHVPLcHt.HHH@HtH;H(vH@HuH9tH;M(sJCHCHC(LcLc H|$(dH3<%(HH8[]A\A]fH}0LH8H9ICHCtyLcLc HpPHC(HtHL$ LHH\$ H fDHHQHuHKHHHQHuIUhHK HCHS(<HC(LcLc HL$LD$Ht$Ht$LD$HL$~(H H5H=Rposs.size() == 1USHHHHHdH%(HD$81H|$(uDHD$Ht$Ho@ o@0CHL$8dH3 %(Hu:HH[]H|$(tH H5H=`Ht$HHHHH@Jf.wtf.vdH Qf.f.f.|f.w HqH9prlHHrHJJBo@HBHpHHfHpH9rsH Qf.wf.w HqH9prf.wf.wJHAH9Bs@H@HpHPPAoA@HqHQfDHqH9r:H@HpHHHBoB@HrHJUSHH_HtQLFHCAHtHHK(L9wHCE1HuEIu1HI9HGIGH[]fH_1H9_HtHHILEHH(HAUHGATUSHIHH9tLjL9n(Hv:HGH9Ht#HL9h(HsjHxHEHEH[]A\A]sfHO 1H9HtHL;h(Hs,H{HEHDH(tH_ HC(H9Bw3HLH[]A\A]fDHH1[]A\A]HH1[]A\A]AVAUIATUISH_HugHC1Ht$HHk LHyHCHu܄Iu.LH1҅HHHIH[]A\A]A^H_1I9]HtHIHh HAVHGAUATUISHHH9Ln HHLx+LLI1҅HL[]A\A]A^LuI9LtHHx LIyNI}HALEIDH[L]A\A]A^H(tH_ HE1H{ HxHLH[]A\A]A^@HE H9tGHHT$Hp LIyH{HT$IEH{IHIEDE1HH9HG HOH)ILD>0HI1H>H9H~HyH~HIHAH H L9t"HtH~H>HyH9uoFIIHH HHHGLNLGoHOHHFLOLNHW HG(LOLN LO LN(LO(LFHNHV HF(AUATIUSHH9tVIHHDHtHCHHHu HU(HHH I9HuHH[]A\A]HHH[]A\A]HI9tI}IEH9tI HHH9AWAVIAUATIUSIH1H8HT$Ht$LHH9IuInIFLl$H)HH9HL)HD$ HH9HD$(HHHHHH)HL$HHHL$INL)IIH~'H H HHIuIt$ LI LI9IuH8[]A\A]A^A_I>HHH)HH)H9H9HBHH9HHHI>ILl$LLH|$HLHIvLHMnI.II9t&H}HEH9tH I9uI.HtHHM&M~IMfH8[]A\A]A^A_@fDH|$ HD$(LD$HPfDLHT$HT$IHHuLHLLD$H+\$(H|$HHI^HI^HD$ LD$IFL9D$m@It$ LLD$I LLD$IL9uH8[]A\A]A^A_fDH|$ HPLD$ZLHT$HT$IHHu3@HH5E18H=HLH9tH;HCH9tH MtLHHHBSH?II?IIL9HHYILIBL@IM)MHAAIL)KIf.wf.w H[I9Yw f(MLH IHHH)L9HCAoAC|uHHH?HHH9H@IHI)HPL$LT$LL$ HH?HHH9 rHHIIHI)A@f.wf.M;HH@HQHHH)HH?CHAo@HH9HHC|AHMPMH[fDHTIH@HH RHH)HHI)A@CAo@CfH@HH)IAHMPMH[fHHBAUATIUSIAI?IIL9IfDIBL HHMYLJ,H]L9v HIMM9NM|MtkIQII?III9~:NL9w/fLMIL9vI@NHH?HJHL9|H[]A\A]fIDHBHH?HHL9tJvfKT HLNIUMtHHtSATIUSHHsLHsPH{@HkH{ HC0H9tHHHu[]A\DHtCATIUSHHsLHs@HkH{0HHHu[]A\EdgesPositionHandler~EdgePositionHandler okAUATUSHHdH%(H$1HHH8HtH1HuAHsXH{HHH$dH3%(Hĸ[]A\A]Ld$ LI|$H5LmIt$HHHL $LH1LﹰH<$H9tLHSHH߾x[AWAVAUATIUSHHdH%(H$1(Ht$ HT$(H$H9$vH$H9$`ID$XIL$PHHT$(IfIH@HtH9P(sH@HuI9tI;U(sHD$ HT$`I|$HLHD$`IM}@Mu8LMuFfDLMMtI HyMMuL9Hs HL{HHk@o$HCP)D$@Ho$)D$PLHt$@LD$HLT$PL\$X@HH@Ht HP H9H99tH@HuI9H|$8H|$`LD$@HL$8LHHCPHt$`H|$hLD$pLT$xHHt$@H|$HLD$PLT$Xu5fIH@Ht HP H9H9tH@HuL|$8LH9{XHL$8H|$`LD$@HLHD$8Ht$`HL$hHT$pHD$xHt$@HL$HHT$PHD$XH$H$HH$H$H$H$dH3%(HĘ[]A\A]A^A_DA|$(5H H5H=xpH\$HuHUHHx H@0HHC H|$HD$L{HHT$Ht$I}0CHHCPL{XL{`Hk@HChHI9t HLHIEXgDHP(L9L9L9P0uL9X8HP(H9H9L;@0uL;P8 HT$PHL$HHD$XHt$@YHsPHHD$H{ H9|$HD$t HD$HHD$HD$LxHHh@HIH|$Hr HT$HT$HHHHPosFillerContig mapped on fragments.--/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/visualization/position_filler.hpp mapped on not adjacent edge. Position in contig is UHHAWAVAUATISHHH dH4%(Hu1HpHPHH3HSHGHHHH8HHtH1eI$I9D$HHDžhH@HH8H@H0HH(AH HHHLpHCHH HpA~(HPHxHHM9LLHXH`H9HH^H H(L0L(HLL@HHHPLLH@H L9tH HH9tID$I+$HhHhHH9@LhH@LLH8LLfo)pMH HLLHXHH`LHhH@LLpLHxH9kH8LLHH#pHHH#H#Z8HHH#HHXH9ZH8HPH H1H H0H(H5HHHHH54HHH@LLHHHH5HHH8LLHHH5HHIuHH5HHLHHPH0L3H HpHL LH@1LH HCH9tH0f.H H5H=#@A~(.H H5H=sfH@HpzH fHHHH9tH]dH3%(L5He[A\A]A^A_]HH#ZHHH#H9tH H5H=L@LIH5HHIH5 HIIt$I+4$LHH5HL+H IwHL LH01LH HH9tLH HIH9tLLHHHH9tLHIH HH9tLH HIH9tLH0IH0H@HH9tH]H]HqHstd::pair debruijn_graph::GenomeConsistenceChecker::Merge(const std::vector&) constvoid debruijn_graph::GenomeConsistenceChecker::FillPos(path_extend::EdgeId, const omnigraph::EdgesPositionHandler&)void debruijn_graph::GenomeInfo::AddInfo(debruijn_graph::ChromosomeInfo)void omnigraph::EdgesPositionHandler::AddEdgePosition(omnigraph::EdgesPositionHandler::EdgeId, std::__cxx11::string, size_t, size_t, size_t, size_t) [with Graph = debruijn_graph::DeBruijnGraph; omnigraph::EdgesPositionHandler::EdgeId = restricted::pure_pointer >; std::__cxx11::string = std::__cxx11::basic_string; size_t = long unsigned int]std::pair omnigraph::MappingPath::operator[](size_t) const [with ElementId = restricted::pure_pointer >; size_t = long unsigned int]bool restricted::pure_pointer::operator==(const restricted::pure_pointer&) const [with T = omnigraph::PairedVertex]void omnigraph::ObservableGraph::AddActionHandler(omnigraph::ObservableGraph::Handler*) const [with DataMaster = debruijn_graph::DeBruijnDataMaster; omnigraph::ObservableGraph::Handler = omnigraph::ActionHandler >, restricted::pure_pointer > >; typename omnigraph::GraphCore::EdgeId = restricted::pure_pointer >; typename omnigraph::GraphCore::VertexId = restricted::pure_pointer >]void omnigraph::EdgesPositionHandler::AddEdgePositions(omnigraph::EdgesPositionHandler::EdgeId, Iter, Iter) [with Iter = __gnu_cxx::__normal_iterator >; Graph = debruijn_graph::DeBruijnGraph; omnigraph::EdgesPositionHandler::EdgeId = restricted::pure_pointer >]std::vector omnigraph::EdgesPositionHandler::GetEdgePositions(omnigraph::EdgesPositionHandler::EdgeId) const [with Graph = debruijn_graph::DeBruijnGraph; omnigraph::EdgesPositionHandler::EdgeId = restricted::pure_pointer >]void omnigraph::EdgesPositionHandler::AddEdgePosition(omnigraph::EdgesPositionHandler::EdgeId, std::__cxx11::string, omnigraph::MappingRange) [with Graph = debruijn_graph::DeBruijnGraph; omnigraph::EdgesPositionHandler::EdgeId = restricted::pure_pointer >; std::__cxx11::string = std::__cxx11::basic_string]omnigraph::MappingRange omnigraph::MappingRange::Fit(size_t) constomnigraph::MappingRange omnigraph::MappingRange::Shift(int) constvoid omnigraph::EdgesPositionHandler::AddAndShiftEdgePositions(omnigraph::EdgesPositionHandler::EdgeId, const std::map, std::set >&, int) [with Graph = debruijn_graph::DeBruijnGraph; omnigraph::EdgesPositionHandler::EdgeId = restricted::pure_pointer >]std::map >, std::__cxx11::basic_string > debruijn_graph::GenomeConsistenceChecker::EdgeLabels() constomnigraph::MappingRange omnigraph::EdgesPositionHandler::GetUniqueEdgePosition(omnigraph::EdgesPositionHandler::EdgeId, const string&) const [with Graph = debruijn_graph::DeBruijnGraph; omnigraph::EdgesPositionHandler::EdgeId = restricted::pure_pointer >; std::__cxx11::string = std::__cxx11::basic_string]path_extend::EdgeId debruijn_graph::ChromosomeInfo::EdgeAt(size_t) constvoid debruijn_graph::GenomeConsistenceChecker::PrintMisassemblyInfo(path_extend::EdgeId, path_extend::EdgeId) constvoid path_extend::PairedInfoLibraryWithIndex::CountDistances(path_extend::EdgeId, path_extend::EdgeId, std::vector&, std::vector&) const [with Index = const omnigraph::de::PairedIndex&; path_extend::EdgeId = restricted::pure_pointer >]double path_extend::PairedInfoLibraryWithIndex::CountPairedInfo(path_extend::EdgeId, path_extend::EdgeId, int, bool) const [with Index = const omnigraph::de::PairedIndex&; path_extend::EdgeId = restricted::pure_pointer >]debruijn_graph::EdgeInfo::EdgeInfo(IdType, unsigned int, unsigned int) [with IdType = restricted::pure_pointer >]const std::pair debruijn_graph::EdgeIndex::get(const KMer&) const [with Graph = debruijn_graph::DeBruijnGraph; typename Graph::EdgeId = restricted::pure_pointer >; debruijn_graph::EdgeIndex::KMer = RuntimeSeq<128>]debruijn_graph::KmerMapper::Kmer debruijn_graph::KmerMapper::Substitute(const Kmer&) const [with Graph = debruijn_graph::DeBruijnGraph; debruijn_graph::KmerMapper::Kmer = RuntimeSeq<128>]Range::Range(size_t, size_t)RuntimeSeq::RuntimeSeq(size_t, const S&, size_t) [with S = Sequence; long unsigned int max_size_ = 128; T = long unsigned int; size_t = long unsigned int]void Range::shift(int)void Sequence::InitFromNucls(const S&, bool) [with S = std::__cxx11::basic_string]void io::SingleRead::Init()void path_extend::PairedInfoLibraryWithIndex::CountDistances(path_extend::EdgeId, path_extend::EdgeId, std::vector&, std::vector&) const [with Index = const omnigraph::de::PairedIndex&; path_extend::EdgeId = restricted::pure_pointer >]double path_extend::PairedInfoLibraryWithIndex::CountPairedInfo(path_extend::EdgeId, path_extend::EdgeId, int, bool) const [with Index = const omnigraph::de::PairedIndex&; path_extend::EdgeId = restricted::pure_pointer >]size_t path_extend::BidirectionalPath::Length() constconst debruijn_graph::ChromosomeInfo& debruijn_graph::GenomeInfo::UniqueChromosomeInfo(path_extend::EdgeId) constdouble path_extend::PairedInfoLibraryWithIndex::CountPairedInfo(path_extend::EdgeId, path_extend::EdgeId, int, int) const [with Index = const omnigraph::de::PairedIndex&; path_extend::EdgeId = restricted::pure_pointer >]double path_extend::PairedInfoLibraryWithIndex::CountPairedInfo(path_extend::EdgeId, path_extend::EdgeId, int, int) const [with Index = const omnigraph::de::PairedIndex&; path_extend::EdgeId = restricted::pure_pointer >]void btree::btree_iterator::increment_slow() [with Node = const btree::btree_node >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> >; Reference = const std::pair >, omnigraph::de::StrongWeakPtr > > >&; Pointer = const std::pair >, omnigraph::de::StrongWeakPtr > > >*]size_t path_extend::PairedInfoLibraryWithIndex::FindJumpEdges(path_extend::EdgeId, std::set > >&, int, int, size_t) const [with Index = const omnigraph::de::PairedIndex&; size_t = long unsigned int; path_extend::EdgeId = restricted::pure_pointer >]void btree::btree_iterator::increment_slow() [with Node = const btree::btree_node >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> >; Reference = const std::pair >, omnigraph::de::StrongWeakPtr > > >&; Pointer = const std::pair >, omnigraph::de::StrongWeakPtr > > >*]btree::safe_btree_iterator::pointer btree::safe_btree_iterator::operator->() const [with Tree = const btree::safe_btree >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> >; Iterator = btree::btree_iterator >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> >, const std::pair >, omnigraph::de::StrongWeakPtr > > >&, const std::pair >, omnigraph::de::StrongWeakPtr > > >*>; btree::safe_btree_iterator::pointer = const std::pair >, omnigraph::de::StrongWeakPtr > > >*]btree::safe_btree_iterator::pointer btree::safe_btree_iterator::operator->() const [with Tree = const btree::safe_btree >, omnigraph::de::NoLockingAdapter >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> >, std::less > >, std::allocator >, omnigraph::de::NoLockingAdapter >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> > > >, 256> >; Iterator = btree::btree_iterator >, omnigraph::de::NoLockingAdapter >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> >, std::less > >, std::allocator >, omnigraph::de::NoLockingAdapter >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> > > >, 256> >, const std::pair >, omnigraph::de::NoLockingAdapter >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> > >&, const std::pair >, omnigraph::de::NoLockingAdapter >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> > >*>; btree::safe_btree_iterator::pointer = const std::pair >, omnigraph::de::NoLockingAdapter >, omnigraph::de::StrongWeakPtr > >, std::less > >, std::allocator >, omnigraph::de::StrongWeakPtr > > > >, 256> > >*]size_t path_extend::PairedInfoLibraryWithIndex::FindJumpEdges(path_extend::EdgeId, std::set > >&, int, int, size_t) const [with Index = const omnigraph::de::PairedIndex&; size_t = long unsigned int; path_extend::EdgeId = restricted::pure_pointer >]bool restricted::pure_pointer::operator==(const restricted::pure_pointer&) const [with T = omnigraph::PairedEdge]size_t debruijn_graph::ChromosomeInfo::UniqueEdgeIdx(path_extend::EdgeId) constconst typename MapT::mapped_type& utils::get(const MapT&, const typename MapT::key_type&) [with MapT = std::map, debruijn_graph::ChromosomeInfo>; typename MapT::mapped_type = debruijn_graph::ChromosomeInfo; typename MapT::key_type = std::__cxx11::basic_string]std::pair, long unsigned int> debruijn_graph::GenomeInfo::UniqueChromosomeIdx(path_extend::EdgeId) conststd::set omnigraph::EdgesPositionHandler::GetEdgePositions(omnigraph::EdgesPositionHandler::EdgeId, const string&) const [with Graph = debruijn_graph::DeBruijnGraph; omnigraph::EdgesPositionHandler::EdgeId = restricted::pure_pointer >; std::__cxx11::string = std::__cxx11::basic_string]omnigraph::MappingPath > > debruijn_graph::GenomeConsistenceChecker::ConstructEdgeOrder(const string&) constsize_t Range::size() constUHAWAVAUATISIILHLHH8H@dH%(HE1H HUHMH`LH(A(HHH@H0H;0t`LeM|$L}H3LHSHH8s8Ls0s(Ls LH}H L9tH@H90uHhH`H0H8x(\H;0LeM|$fDL}H3LHSHH8s8Ls0s(Ls LH}H L9tH@H90uHhH`H9It%@H;HCH9tH@I9uH`HtHHHH@H9It%@H;HCH9tH@I9uH@HtHHEdH3%(uoHe[A\A]A^A_]@H8x(7H H5H=H8x(tH;0HH HHH(H}IHL9tH}IHL9uAVAULoPATUHSHwXMHH @H[HtH9S(rHCvKIHHuM9L9e`u%t!H}HHEXLm`LmhHEp[]A\A]A^fDHKHu%DIHIHtH;Q(rHIHuDHtH;P(wmHH@HuH9]`uIM9zL9tDHHLIHp@Hx0HHLHmpL9u[]A\A]A^@H@낸initial_range.end_pos >= initial_range.start_posUHAWAVAUATISHHpHhdH%(HE1(D`[HAHHXH9HxpLeMl$HxHXXLpHL9)`؉df.HC(HS H9OH9trHs0HK8H9teDdA9}YLc`A9J<|H)LH1HH9ICHH9:H H5H=]fDHEHEHEHEHxLLmHp HP(HHpHhLuuLuuH}H L9tHL9HHxHXHxH9HEdH3%(He[A\A]A^A_]f.HC(HS H9H H5H=JHH#pLMG0Hv I+pH9H9H9H9wHH9H)HHUHEH}HMHxA(HxH H5H=H}IHL9tHAWAVAUATUSH8HdH%(HD$(1H;^HL$HD$ LoPIHE1HT$HD$If.IVXHH{LHHH@HtH9x(sH@HuL9teH;y(LsZDHHRHtH;z(vHRHuL9tH;x(sHT$I~HHH\$ HT$Ht$HH0ELHIV0EHL!D+JDx EH9]5HD$(dH3%(uH8[]A\A]A^A_AWAVIAUATIUSHHHOHHI)H)HHH4IH9LH$H]HMMH$III)MtAI9t LHLHL$L$HL$L$IODM)L9tLLLIMHtHLmLuL}H[]A\A]A^A_fL<FfDH?H9-HuME1E1>/srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/modules/alignment/kmer_mapper.hppanswer != valAVAUIATUSHH@dH%(HD$81~(oHHB I~HoBAVDHC CHHhH0H\Ll$HEf8(LHD$HD$HD$ HD$(Ld$0IIJHL$0tHHHJ!DA~PHC HPHHt$HD$H9u~1 fILH9 u)HH9uHC HPHHt*HD$H9uD1I|H9 0AWAVMAUATUSHHXHHt$ HT$(HL$LD$dH%(HD$H1H?L$_HD$(H9D$'HL$LD$Ht$ HT$(T$H IՉQHHH\E1H:H,fT$AXWA_W(%5TXX((T.v,fU*Vf~,f~ҁ։ށHκ)ʅHփIvI;vD$<HtHIvfHt$@LZD$@IGILEI9T$A_AXfHHHE1HtL}Hm-fIv.GI;vD$<KHT$u@HcMAA{oDA^MvA>uEFA9tHcH@M9lvL|$|$IƉL|$9|$u I9HcH[ID HHHHHu 1H@Lf-DD ADfECfω΁߅IDΉ)΅I9 A9|ZXHL9(Xb(TAXAX(D(TD.v,fAU*Vf~,f~сUID.Gef߉@w9IXHHg1of.H([]A\A]A^A_HfHH H*XEHT$Ht$H|$H|$Ht$HT$HH;H H5H=t HH=|$|$tH=HHH5H=H|$HAH+HHAWAVAUATUSHHHHuH?IHI)H)HHH IH9LHT$H}HuLx HT$IIMtoAEoBAEH9t?LHHtooBAH H H9uHG HH)HHM|@H9t=HLDHtooBAH H H9uH H)HM| HtLeL}LuH[]A\A]A^A_ÐHIHH9HuA E1E1HGH;Gt&HtooF@H HGHHshift > 0 || size_t(-shift) <= start_posAWAVAUATUSHHHdH%(HD$81H9VIILoE1HHcHD$HD$H$;DH4$HLHD$H\$II$ID$H)HI9LIvHHI;vHtoHIvLHID$o)D$o@HD$)D$ rH9D$gHD$H9D$RH H5H=HD$8dH3%(u%HH[]A\A]A^A_fL] is mappingbasic_string::substr is mappedNumber of edges is /srv/scratch/marinovg/spades-cloudspades-paper/assembler/src/common/modules/alignment/sequence_mapper.hpp%s: __pos (which is %zu) > this->size() (which is %zu)AWAVIAUATUSHHdH%(H$1Ht$H8HtHIH$Iv IV(1E1HGH|$0HH$H$L$HHCHCHD$ H$HCHC HC(HD$(H$HD$L9sIF <(rHL9rI9HD$Dl$HLxHL)M9H$H$M)HUHLI9LGH$J&L$1HLL$LHt$LA׋T$LHLH$HtH$HH9tH8IHtHH8IHtHHD$0H$HH9tH$dH3 %(HHĨ[]A\A]A^A_I9rHIcHD$HEL)M9HH@HD$}H$M)H|$ LI9HGLGJ&H$H$HD$`D$pHD$hHHH<HD$xHT$hL$HD$xLjHHT$@L`ILl$8E*AnH1E111D|$@Hl$HH\$PLt$XDHIIML$C*~HHHI H@u O41IE1IL9l$hwHMLHHl$HD|$@H\$PLt$XtMHHL$8H9sII@HHH9uHT$`Ht$H|$(HD$H$H9$ DE1LkHHD$NHt$IcLHH$H$H$IH$H)HL9LHsHHH;sHtoHHsLHH$Eo)$o@H$)$TH9D$IH$H9D$1H H5H=fH|$(H|$xHt /HD$ 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H9H$0v$HD$(LHL9tH$@H9J H|$H$`H$PH$PHHPHt$H9+ H$PHHH$`HHH$XHH@@HH9$XUH|$H5L$pIWH$pHHPH9 H$pHHH$HHH$xHH@@IGH$pH|$PH9 HL$8H$H$xHH9 HHL$`Ht$PHT$XHD$` H$pH$HDŽ$xIGH$pH9tHD$H$PHH9tHD$H$HH9tH$IL9tH$HH9tHD$0H$HH9tHD$(H$0HH9tAD$`IT$HAl$bfAl$(f+l$ DI9fD$ IGIt$@L)LH$pHD$LH9HGHIT$(I9 H|$It$ L)HGLH$PHD$H9HGHHt$PHT$XLcHL#HH$PH$XLk0H{ Lk HH$pH$xLsPH{@Ls@HD$HKHH9K(fkbfC`tHKHH9K( HHS HfDHt$PHT$XHD$`IH$p8H|$11YDH|$(11DH|$011HD11HH$xH|$PH$xH|$P/H5H=H1LHHT$8H|$PHH9tHH H5H=H5H=H1LHH$pIWH9tHHT$H$PHH9tH{@HI9tH{ I9tH;I9tHHH$HH9tHT$0H$HH9tL|$(H$0IL9ZHHD$H$PHH9tL|$(H$0IL9tH$IL9tHD$0H$HH9tHT$@H$HH9tHT$HH|$pHH9tH$HH9tHD$H$HH9H=H=HHD$H$PHH9tHT$H$HH9tH$IL9xnH=HH5H=H1HH#H HH=HHHHH=HHH=H=HH%% %$$#    $ $  d$$%%$$$!$$%% #!##$$$$$$$%%% /t Sequence Sequence::Subseq(size_t, size_t) constvoid Sequence::InitFromNucls(const S&, bool) [with S = std::__cxx11::basic_string]void io::SingleRead::Init()io::SingleRead io::SingleRead::Substr(size_t, size_t) constSequence omnigraph::Subseq(const io::SingleRead&, size_t, size_t)>g R  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I$II9KHcL[HHoCHs HH!HHHHu HHS8HHH9{HtwHH!{@HH8L@@tWHLH!Hp@HH8H9rMSHHsHS8:f.A͉Au9\HzLH9sH[]A\A]A^A_DHcS(HH${@MHCMZL9tRHLtDI21Ht,HHHtWu HHIHs S(L[>tC(C(V9|H{ Hs C(LS0I1Ht- LLMMtAyu LLH9IJHHKHHoCH3HN HHHHIZE`HHIEAu HHL9HCMrL9mHL[I1Ht.2@HHHt@Ou HHIL9HS K(LsD9c(@HH!H9H H5H=MH HBH)HHC C(1E11A9IL[OH?ZDoA9tAH{ K(wIHHvu III9HcLsHHoCHS L9HCHIrH9MMMEP1D9LKHcHHM9Ls,EHcAHHM9L%9uՁ?A8dHcM|A4$@uBI$HHJLHH@u I$HH{ K(LISI+IM"MLDO1D9OLCHcHHL;Dv0@HcAHHL9D9uՁ??HcHyE1E1HF(HHHH"IAQt@uA9M9HHKM:M#LDo1D9hLCHcHHL;Dv/.HcAHHL;D 9uՁ??HcHzHcC(HHH<H!HHHHu 1HXHC8C@ AHM@A8EPA9tHcLC K(HHA;IIzIM9fDOH?DOA9tA$H{ K(I$HHvu I$II9uHC C(1119Hs HcL[HH>oCE1E1tHC C(11E19-HcHsHHAoHS CrHC C(1119xIHS LsA͉Au9AˉAs9ẢA|$9E1AQD9EaMIA9tuaLMLIDbIgL[A{LLaHHyHHHHS HsWIHs L[A$u6I$HHILu I$HH{ K(LA;ulItwIJHHHILC K(.Au0IHHteILu IHH{ K(LAKMHHH뢸11E1&111p1?110E1E9+1ɺWE1E1pH H5H=}H=HH=HH5Homnigraph::MappingPath > > alignment::BWAIndex::AlignSequence(const Sequence&) constRange Range::Invert(size_t) constRange::Range(size_t, size_t)bool restricted::pure_pointer::operator==(const restricted::pure_pointer&) const [with T = omnigraph::PairedEdge]void btree::btree_iterator::increment_slow() [with Node = const btree::btree_node >, std::less > >, std::allocator > >, 256> >; Reference = const restricted::pure_pointer >&; Pointer = const restricted::pure_pointer >*]btree::safe_btree_iterator::reference btree::safe_btree_iterator::operator*() const [with Tree = const btree::safe_btree >, std::less > >, std::allocator > >, 256> >; Iterator = btree::btree_iterator >, std::less > >, std::allocator > >, 256> >, const restricted::pure_pointer >&, const restricted::pure_pointer >*>; btree::safe_btree_iterator::reference = const restricted::pure_pointer >&]GCC: (Ubuntu 7.5.0-3ubuntu1~18.04) 7.5.0zRx L0BBI B(H0A8L?n 8A0A(B BBBD zPLRx  $2Ak D A"AZ E A$\AL E K PBBB B(A0A8O& 8A0A(B BBBG H`aBBB B(A0A8JP 8A0A(B BBBK HaBBB B(A0A8JP 8A0A(B BBBK HqBBB B(A0A8JP 8A0A(B BBBB PBBB B(D0A8G 8A0A(B BBBK 4AF G:.T. 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