Query_ID	Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query_consensus	Target_consensus	Orientation
V_MYOD_01	V_MYOD_01	0	3.81311e-21	1.90656e-20	3.81311e-20	12	CAACAGGTGGTG	CAACAGGTGGTG	+
V_MYOD_01	V_E47_01	1	1.373e-05	6.86499e-05	6.86499e-05	12	CAACAGGTGGTG	ACGGCAGGTGTCCCC	+
V_MYOD_01	V_AP4_01	2	0.00251742	0.0125871	0.00629354	12	CAACAGGTGGTG	AGAACCAGCTGCGGTCAG	+
V_MYOD_01	V_CMYB_01	5	0.0361264	0.180632	0.0516092	12	CAACAGGTGGTG	CCCAACGGCGGTTGGGGG	+
V_E47_01	V_E47_01	0	4.2913e-29	2.14565e-28	4.2913e-28	15	ACGGCAGGTGTCCCC	ACGGCAGGTGTCCCC	+
V_E47_01	V_MYOD_01	-1	1.2602e-05	6.30099e-05	6.30099e-05	12	ACGGCAGGTGTCCCC	CAACAGGTGGTG	+
V_E47_01	V_AP4_01	3	0.00404275	0.0202137	0.0128228	15	ACGGCAGGTGTCCCC	CTGACCACAGCTGACTCT	-
V_E47_01	V_CMYB_01	4	0.0302966	0.151483	0.0504943	14	ACGGCAGGTGTCCCC	CCCAACGGCGGTTGGGGG	+
V_E47_01	V_VMYB_01	-2	0.396566	1.98283	0.495708	10	ACGGCAGGTGTCCCC	TTCCGTTATT	-
V_VMYB_01	V_VMYB_01	0	8.63485e-21	4.31743e-20	8.63486e-20	10	AATAACGGAA	AATAACGGAA	+
V_VMYB_01	V_CMYB_01	2	0.00584899	0.029245	0.029245	10	AATAACGGAA	CCCCCAACCGCCATTGGG	-
V_CMYB_01	V_CMYB_01	0	6.16363e-37	3.08182e-36	6.16363e-36	18	CCCAACGGCGGTTGGGGG	CCCAACGGCGGTTGGGGG	+
V_CMYB_01	V_VMYB_01	-6	0.00965946	0.0482973	0.0482973	10	CCCAACGGCGGTTGGGGG	TTCCGTTATT	-
V_CMYB_01	V_MYOD_01	-5	0.0310666	0.155333	0.0778926	12	CCCAACGGCGGTTGGGGG	CAACAGGTGGTG	+
V_CMYB_01	V_E47_01	-4	0.031157	0.155785	0.0778926	14	CCCAACGGCGGTTGGGGG	ACGGCAGGTGTCCCC	+
V_CMYB_01	V_AP4_01	-1	0.0580427	0.290213	0.116085	17	CCCAACGGCGGTTGGGGG	CTGACCACAGCTGACTCT	-
V_AP4_01	V_AP4_01	0	8.62711e-32	4.31356e-31	8.62711e-31	18	AGAACCAGCTGCGGTCAG	AGAACCAGCTGCGGTCAG	+
V_AP4_01	V_MYOD_01	-2	0.00330938	0.0165469	0.0126194	12	AGAACCAGCTGCGGTCAG	CAACAGGTGGTG	+
V_AP4_01	V_E47_01	0	0.00378581	0.0189291	0.0126194	15	AGAACCAGCTGCGGTCAG	GCGGACACCTGCCGG	-
V_AP4_01	V_CMYB_01	-1	0.063262	0.31631	0.105437	17	AGAACCAGCTGCGGTCAG	CCCCCAACCGCCATTGGG	-

# Tomtom (Motif Comparison Tool): Version 5.4.0 compiled on May 20 2021 at 11:57:59
# The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html.
# tomtom -verbosity 1 -dist ed -oc results/tomtom3 -incomplete-scores common/sample.meme common/sample.meme