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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.4.0 (Release date: Mon Aug 16 16:18:19 2021 -0700)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: accurate and versatile sequence motif discovery",
Bioinformatics, Mar. 24, 2021.
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ALPHABET= ACDEFGHIKLMNPQRSTVWY

strands: +

Background letter frequencies
A 0.072 C 0.0288 D 0.0686 E 0.0775 F 0.0432 G 0.0576 H 0.0255 I 0.0476 K 0.0863 L 0.0874 M 0.0177 N 0.0532 P 0.0321 Q 0.0288 R 0.031 S 0.0587 T 0.0476 V 0.0698 W 0.0167 Y 0.0498 

MOTIF 1-AGTWYALAK STREME-1
letter-probability matrix: alength= 20 w= 9 nsites= 3 S= 8.3e-002
 0.937560 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.936593 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.935923 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.933839 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.936071
 0.471201 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.470307 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.472242 0.467554 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.937560 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.472168 0.005883 0.467554 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353

MOTIF 2-YPEGDLEIL STREME-2
letter-probability matrix: alength= 20 w= 9 nsites= 3 S= 8.3e-002
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.469563 0.004693 0.001120 0.469712
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.467554 0.003576 0.468521 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.937932 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.936593 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.937337 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.938602 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.937932 0.002907 0.003874 0.001716 0.003204 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.004842 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.935923 0.005809 0.005883 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353
 0.471201 0.001939 0.004618 0.005214 0.002907 0.003874 0.001716 0.003204 0.005809 0.472242 0.001194 0.003576 0.002162 0.001939 0.002088 0.003948 0.003204 0.004693 0.001120 0.003353

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Stopped because maximum number of motifs (2) reached.
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COMMAND:	streme -p common/lipocalin.s -oc results/streme6 -objfun de -order 1 -nmotifs 2 -protein -maxw 20 -hofract 0.2 -verbosity 1
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CPU:		Timothys-Mac-Mini.local
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FINALTIME:	0.14 seconds
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