streme -p common/dna_with_covalent.fa -oc results/streme8 -objfun de -order 1 -nmotifs 2 -alph common/dna_with_covalent.alph -nmotifs 2 -hofract 0.2 -verbosity 1 both 0.24 0.244 0.244 0.24 4.3e-08 4.3e-08 0.000222 0.0156 0.0156 0.000222 4.3e-08 4.3e-08 Differential Enrichment Fisher Exact Test 8 15 2 0.2 25 4 20 3 0 no 0 5 1 0.85 5 no no 0 center Timothys-Mac-Mini.local Stopped because maximum number of motifs (2) reached.