<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<mast version="5.4.0" release="Tue Mar 9 17:38:20 2021 -0800">
	<command_line><arg>mast</arg><arg>-oc</arg><arg>results/mast3</arg><arg>-nostatus</arg><arg>/Users/t.bailey/meme_git/meme-xstreme/tests/meme/meme.crp0.classic.anr.html</arg><arg>common/crp0.s</arg></command_line>
	<settings strand_handling="combine" max_correlation="0.60" remove_correlated="n" max_seq_evalue="10" adjust_hit="n" max_hit_pvalue="0.0001" max_weak_pvalue="0.0001"/>
	<alphabet name="DNA" like="dna">
		<letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/>
		<letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/>
		<letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/>
		<letter id="T" symbol="T" aliases="U" complement="A" name="Thymine" colour="008000"/>
		<letter id="N" symbol="N" aliases="X." equals="ACGT" name="Any base"/>
		<letter id="V" symbol="V" equals="ACG" name="Not T"/>
		<letter id="H" symbol="H" equals="ACT" name="Not G"/>
		<letter id="D" symbol="D" equals="AGT" name="Not C"/>
		<letter id="B" symbol="B" equals="CGT" name="Not A"/>
		<letter id="M" symbol="M" equals="AC" name="Amino"/>
		<letter id="R" symbol="R" equals="AG" name="Purine"/>
		<letter id="W" symbol="W" equals="AT" name="Weak"/>
		<letter id="S" symbol="S" equals="CG" name="Strong"/>
		<letter id="Y" symbol="Y" equals="CT" name="Pyrimidine"/>
		<letter id="K" symbol="K" equals="GT" name="Keto"/>
	</alphabet>
	<background source="--nrdb--" A="0.274262" C="0.22521" G="0.22521" T="0.274262"/>
	<motif_dbs>
		<motif_db source="/Users/t.bailey/meme_git/meme-xstreme/tests/meme/meme.crp0.classic.anr.html" last_mod_date="Fri Mar  5 17:35:06 2021">
			<background A="0.304" C="0.196" G="0.196" T="0.304"/>
		</motif_db>
	</motif_dbs>
	<motifs>
		<motif db="0" id="WWTAYKTGAWCNAYDTCACAM" alt="MEME-1" length="21" nsites="17" evalue="5.8e-004">
			<pos A="44" C="-73" G="-1073" T="63"/>
			<pos A="63" C="-1073" G="-73" T="44"/>
			<pos A="-5" C="-1073" G="-1073" T="121"/>
			<pos A="63" C="-15" G="-15" T="-78"/>
			<pos A="-237" C="59" G="-173" T="95"/>
			<pos A="-1073" C="-173" G="159" T="21"/>
			<pos A="-1073" C="26" G="-1073" T="133"/>
			<pos A="-37" C="-1073" G="172" T="-137"/>
			<pos A="109" C="59" G="-1073" T="-237"/>
			<pos A="44" C="-15" G="-15" T="-37"/>
			<pos A="-237" C="185" G="-15" T="-237"/>
			<pos A="-37" C="26" G="85" T="-78"/>
			<pos A="133" C="-1073" G="-15" T="-237"/>
			<pos A="-137" C="59" G="-15" T="44"/>
			<pos A="-5" C="-73" G="59" T="-5"/>
			<pos A="-1073" C="-15" G="-1073" T="144"/>
			<pos A="-237" C="226" G="-1073" T="-1073"/>
			<pos A="154" C="-1073" G="-173" T="-237"/>
			<pos A="-1073" C="235" G="-1073" T="-1073"/>
			<pos A="163" C="-1073" G="-173" T="-1073"/>
			<pos A="44" C="107" G="-1073" T="-78"/>
		</motif>
		<motif db="0" id="ASGRGSMRGRAGSAT" alt="MEME-2" length="15" nsites="3" evalue="3.0e+004">
			<pos A="171" C="-823" G="-823" T="-823"/>
			<pos A="-823" C="77" G="176" T="-823"/>
			<pos A="-823" C="-823" G="235" T="-823"/>
			<pos A="113" C="-823" G="77" T="-823"/>
			<pos A="-823" C="-823" G="235" T="-823"/>
			<pos A="-823" C="176" G="77" T="-823"/>
			<pos A="13" C="176" G="-823" T="-823"/>
			<pos A="13" C="-823" G="176" T="-823"/>
			<pos A="-823" C="-823" G="235" T="-823"/>
			<pos A="13" C="-823" G="176" T="-823"/>
			<pos A="171" C="-823" G="-823" T="-823"/>
			<pos A="-823" C="-823" G="235" T="-823"/>
			<pos A="-823" C="77" G="176" T="-823"/>
			<pos A="171" C="-823" G="-823" T="-823"/>
			<pos A="-823" C="-823" G="-823" T="171"/>
		</motif>
	</motifs>
	<correlations>
		<correlation idx_a="0" idx_b="1" value="0.22"/>
	</correlations>
	<sequence_dbs>
		<sequence_db source="common/crp0.s" last_mod_date="Sun Mar  1 14:58:12 2020" seq_count="18" residue_count="1890"/>
	</sequence_dbs>
	<sequences>
		<sequence db="0" name="malk" comment="29 61" length="105">
			<score strand="both" combined_pvalue="1.05e-08" evalue="1.9e-07"/>
			<seg start="1">
				<data>
GGAGGAGGCGGGAGGATGAGAACACGGCTTCTGTGAACTAAACCGAGGTCATGTAAGGAATTTCGTGATGTTGCT
TGCAAAAATCGTGGCGATTTTATGTGCGCA
				</data>
				<hit pos="3" idx="1" rc="n" pvalue="2.5e-09" match="+++++++++++++++"/>
				<hit pos="63" idx="0" rc="y" pvalue="6.0e-06" match="+ ++++ ++ + + +++ +++"/>
			</seg>
		</sequence>
		<sequence db="0" name="lac" comment="9 80" length="105">
			<score strand="both" combined_pvalue="3.52e-08" evalue="6.3e-07"/>
			<seg start="1">
				<data>
AACGCAATTAATGTGAGTTAGCTCACTCATTAGGCACCCCAGGCTTTACACTTTATGCTTCCGGCTCGTATGTTG
TGTGGAATTGTGAGCGGATAACAATTTCAC
				</data>
				<hit pos="11" idx="0" rc="y" pvalue="8.1e-06" match=" +++++  + + ++++  +++"/>
				<hit pos="55" idx="1" rc="y" pvalue="3.1e-08" match="+++++++++++++++"/>
				<hit pos="75" idx="0" rc="y" pvalue="1.7e-06" match="+++++  ++ +++ +++ +++"/>
			</seg>
		</sequence>
		<sequence db="0" name="male" comment="14" length="105">
			<score strand="both" combined_pvalue="4.19e-08" evalue="7.5e-07"/>
			<seg start="1">
				<data>
ACATTACCGCCAATTCTGTAACAGAGATCACACAAAGCGACGGTGGGGCGTAGGGGCAAGGAGGATGGAAAGAGG
				</data>
				<hit pos="13" idx="0" rc="n" pvalue="2.1e-06" match="+++ +++ +  ++  ++++++"/>
				<hit pos="52" idx="1" rc="n" pvalue="3.1e-08" match="+++++++++++++++"/>
			</seg>
		</sequence>
		<sequence db="0" name="ara" comment="17 55" length="105">
			<score strand="both" combined_pvalue="1.56e-05" evalue="0.00028"/>
			<seg start="1">
				<data>
GACAAAAACGCGTAACAAAAGTGTCTATAATCACGGCAGAAAAGTCCACATTGATTATTTGCACGGCGTCACACT
				</data>
				<hit pos="54" idx="0" rc="n" pvalue="6.2e-09" match="++++++++++++ ++++++++"/>
			</seg>
		</sequence>
		<sequence db="0" name="pbr322" comment="53" length="105">
			<score strand="both" combined_pvalue="5.10e-04" evalue="0.0092"/>
			<seg start="1">
				<data>
CTGGCTTAACTATGCGGCATCAGAGCAGATTGTACTGAGAGTGCACCATATGCGGTGTGAAATACCGCACAGATG
				</data>
				<hit pos="55" idx="0" rc="y" pvalue="5.2e-07" match="++++++ ++   +++++ ++ "/>
			</seg>
		</sequence>
		<sequence db="0" name="ce1cg" comment="17 61" length="105">
			<score strand="both" combined_pvalue="7.29e-04" evalue="0.013"/>
			<seg start="1">
				<data>
TAATGTTTGTGCTGGTTTTTGTGGCATCGGGCGAGAATAGCGCGTGGTGTGAAAGACTGTTTTTTTGATCGTTTT
CACAAAAATGGAAGTCCACAGTCTTGACAG
				</data>
				<hit pos="19" idx="0" rc="y" pvalue="4.1e-07" match="+++++ +++++ +++++ +++"/>
				<hit pos="60" idx="0" rc="n" pvalue="1.4e-06" match="+++ +++++ ++ + ++++++"/>
			</seg>
		</sequence>
		<sequence db="0" name="crp" comment="63" length="105">
			<score strand="both" combined_pvalue="8.58e-04" evalue="0.015"/>
			<seg start="1">
				<data>
CACAAAGCGAAAGCTATGCTAAAACAGTCAGGATGCTACAGTAATACATTGATGTACTGCATGTATGCAAAGGAC
GTCACATTACCGTGCAGTACAGTTGATAGC
				</data>
				<hit pos="62" idx="0" rc="n" pvalue="8.7e-07" match="+ +++++ ++ +++++++++ "/>
			</seg>
		</sequence>
		<sequence db="0" name="cya" comment="50" length="105">
			<score strand="both" combined_pvalue="1.02e-03" evalue="0.018"/>
			<seg start="1">
				<data>
ACGGTGCTACACTTGTATGTAGCGCATCTTTCTTTACGGTCAATCAGCAAGGTGTTAAATTGATCACGTTTTAGA
				</data>
				<hit pos="52" idx="0" rc="y" pvalue="1.7e-06" match="++++ + ++ + ++++++ ++"/>
			</seg>
		</sequence>
		<sequence db="0" name="ompa" comment="48" length="105">
			<score strand="both" combined_pvalue="1.18e-03" evalue="0.021"/>
			<seg start="1">
				<data>
GCTGACAAAAAAGATTAAACATACCTTATACAAGACTTTTTTTTCATATGCCTGACGGAGTTCACACTTGTAAGT
				</data>
				<hit pos="47" idx="0" rc="n" pvalue="7.9e-07" match="+++ + +++  ++  ++++++"/>
			</seg>
		</sequence>
		<sequence db="0" name="malt" comment="41" length="105">
			<score strand="both" combined_pvalue="1.45e-03" evalue="0.026"/>
			<seg start="1">
				<data>
GATCAGCGTCGTTTTAGGTGAGTTGTTAATAAAGATTTGGAATTGTGACACAGTGCAAATTCAGACACATAAAAA
				</data>
				<hit pos="43" idx="0" rc="y" pvalue="8.7e-07" match="++++++++  ++++++++  +"/>
			</seg>
		</sequence>
		<sequence db="0" name="uxu1" comment="17" length="105">
			<score strand="both" combined_pvalue="2.05e-03" evalue="0.037"/>
			<seg start="1">
				<data>
CCCATGAGAGTGAAATTGTTGTGATGTGGTTAACCCAATTAGAATTCGGGATTGACATGTCTTACCAAAAGGTAG
				</data>
				<hit pos="19" idx="0" rc="y" pvalue="1.3e-06" match="++++++ ++++++ ++  +++"/>
			</seg>
		</sequence>
		<sequence db="0" name="deop2" comment="7 60" length="105">
			<score strand="both" combined_pvalue="2.06e-03" evalue="0.037"/>
			<seg start="1">
				<data>
AGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATC
				</data>
				<hit pos="6" idx="0" rc="n" pvalue="1.4e-06" match="+++++++++++++  ++ ++ "/>
			</seg>
		</sequence>
		<sequence db="0" name="tnaa" comment="71 " length="105">
			<score strand="both" combined_pvalue="3.05e-03" evalue="0.055"/>
			<seg start="1">
				<data>
TTTTTTAAACATTAAAATTCTTACGTAATTTATAATCTTTAAAAAAAGCATTTAATATTGCTCCCCGAACGATTG
TGATTCGATTCACATTTAAACAATTTCAGA
				</data>
				<hit pos="73" idx="0" rc="y" pvalue="4.4e-06" match="++++++   + +++++++ ++"/>
			</seg>
		</sequence>
		<sequence db="0" name="gale" comment="42" length="105">
			<score strand="both" combined_pvalue="8.53e-03" evalue="0.15"/>
			<seg start="1">
				<data>
GCGCATAAAAAACGGCTAAATTCTTGTGTAAACGATTCCACTAATTTATTCCATGTCACACTTTTCGCATCTTTG
				</data>
				<hit pos="41" idx="0" rc="n" pvalue="6.5e-06" match=" + ++++   +++++++++++"/>
			</seg>
		</sequence>
		<sequence db="0" name="ilv" comment="39" length="105">
			<score strand="both" combined_pvalue="8.57e-03" evalue="0.15"/>
			<seg start="1">
				<data>
GCTCCGGCGGGGTTTTTTGTTATCTGCAATTCAGTACAAAACGTGATCAACCCCTCAATTTTCCCTTTGCTGAAA
				</data>
				<hit pos="38" idx="0" rc="n" pvalue="6.5e-06" match="++ ++++++ + ++  + +++"/>
			</seg>
		</sequence>
		<sequence db="0" name="tdc" comment="78" length="105">
			<score strand="both" combined_pvalue="1.09e-01" evalue="2"/>
		</sequence>
		<sequence db="0" name="bglr1" comment="76" length="105">
			<score strand="both" combined_pvalue="1.74e-01" evalue="3.1"/>
		</sequence>
	</sequences>
	<runtime host="Timothys-Mac-Mini.local" when="Sat May 22 12:11:13 2021" cycles="5572" seconds="0.006"/>
</mast>
