******************************************************************************** MAST - Motif Alignment and Search Tool ******************************************************************************** MAST version 5.4.0 (Release date: Tue Mar 9 17:38:20 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MAST software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Michael Gribskov, "Combining evidence using p-values: application to sequence homology searches", Bioinformatics, 14(48-54), 1998. ******************************************************************************** ******************************************************************************** DATABASE AND MOTIFS ******************************************************************************** DATABASE adh.s (peptide) Last updated on Sun Mar 1 14:58:12 2020 Database contains 33 sequences, 9996 residues MOTIFS meme.adh.de.oops.html (peptide) MOTIF ID ALT ID WIDTH BEST POSSIBLE MATCH ----- ------------ ------ ----- ------------------- 1 EDLAGKNIRVTG MEME-1 12 MDYQPKNIWVTG 2 ASSGIGKATAKA MEME-2 12 CSSGIGKATAKH PAIRWISE MOTIF CORRELATIONS: MOTIF 1 ----- ----- 2 0.13 No overly similar pairs (correlation > 0.60) found. Random model letter frequencies (from non-redundant database): A 0.073 C 0.018 D 0.052 E 0.062 F 0.040 G 0.069 H 0.022 I 0.056 K 0.058 L 0.092 M 0.023 N 0.046 P 0.051 Q 0.041 R 0.052 S 0.074 T 0.059 V 0.064 W 0.013 Y 0.033 ******************************************************************************** ******************************************************************************** SECTION I: HIGH-SCORING SEQUENCES ******************************************************************************** - Each of the following 33 sequences has E-value less than 10. - The E-value of a sequence is the expected number of sequences in a random database of the same size that would match the motifs as well as the sequence does and is equal to the combined p-value of the sequence times the number of sequences in the database. - The combined p-value of a sequence measures the strength of the match of the sequence to all the motifs and is calculated by o finding the score of the single best match of each motif to the sequence (best matches may overlap), o calculating the sequence p-value of each score, o forming the product of the p-values, o taking the p-value of the product. - The sequence p-value of a score is defined as the probability of a random sequence of the same length containing some match with as good or better a score. - The score for the match of a position in a sequence to a motif is computed by by summing the appropriate entry from each column of the position-dependent scoring matrix that represents the motif. - Sequences shorter than one or more of the motifs are skipped. - The table is sorted by increasing E-value. ******************************************************************************** SEQUENCE NAME DESCRIPTION E-VALUE LENGTH ------------- ----------- -------- ------ ENTA_ECOLI 2,3-DIHYDRO-2,3-DIHYDROXYB... 3.1e-14 248 DHII_HUMAN CORTICOSTEROID 11-BETA-DEH... 1.6e-11 292 YINL_LISMO HYPOTHETICAL 26.8 KD PROTE... 6.8e-11 248 FIXR_BRAJA FIXR PROTEIN 7.8e-11 278 HDHA_ECOLI 7-ALPHA-HYDROXYSTEROID DEH... 7.8e-10 255 BUDC_KLETE ACETOIN(DIACETYL) REDUCTAS... 2.4e-09 241 AP27_MOUSE ADIPOCYTE P27 PROTEIN (AP27) 4.1e-09 244 FVT1_HUMAN no comment 4.3e-09 332 YRTP_BACSU HYPOTHETICAL 25.3 KD PROTE... 8.2e-09 238 DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYDR... 8e-08 270 HDE_CANTR HYDRATASE-DEHYDROGENASE-EP... 1.5e-07 906 3BHD_COMTE 3-BETA-HYDROXYSTEROID DEHY... 1.9e-07 253 BDH_HUMAN D-BETA-HYDROXYBUTYRATE DEH... 2.5e-07 343 2BHD_STREX 20-BETA-HYDROXYSTEROID DEH... 3.8e-07 255 BA72_EUBSP 7-ALPHA-HYDROXYSTEROID DEH... 4.1e-07 249 RIDH_KLEAE RIBITOL 2-DEHYDROGENASE (E... 6.5e-07 249 DHGB_BACME GLUCOSE 1-DEHYDROGENASE B ... 6.7e-07 262 PCR_PEA no comment 9e-07 399 RFBB_NEIGO no comment 1.6e-06 346 BPHB_PSEPS BIPHENYL-CIS-DIOL DEHYDROG... 2.2e-06 275 DHB2_HUMAN no comment 3.2e-06 387 NODG_RHIME NODULATION PROTEIN G (HOST... 3.5e-06 245 MAS1_AGRRA no comment 6.2e-06 476 DHCA_HUMAN no comment 6.7e-06 276 DHES_HUMAN ESTRADIOL 17 BETA-DEHYDROG... 9.5e-06 327 DHB3_HUMAN no comment 1.9e-05 310 HMTR_LEIMA no comment 2.7e-05 287 ADH_DROME ALCOHOL DEHYDROGENASE (EC ... 6.2e-05 255 YURA_MYXXA no comment 0.00013 258 LIGD_PSEPA C ALPHA-DEHYDROGENASE (EC ... 0.00014 305 FABI_ECOLI no comment 0.00018 262 GUTD_ECOLI SORBITOL-6-PHOSPHATE 2-DEH... 0.0031 259 CSGA_MYXXA no comment 0.0074 166 ******************************************************************************** ******************************************************************************** SECTION II: MOTIF DIAGRAMS ******************************************************************************** - The ordering and spacing of all non-overlapping motif occurrences are shown for each high-scoring sequence listed in Section I. - A motif occurrence is defined as a position in the sequence whose match to the motif has POSITION p-value less than 0.0001. - The POSITION p-value of a match is the probability of a single random subsequence of the length of the motif scoring at least as well as the observed match. - For each sequence, all motif occurrences are shown unless there are overlaps. In that case, a motif occurrence is shown only if its p-value is less than the product of the p-values of the other (lower-numbered) motif occurrences that it overlaps. - The table also shows the E-value of each sequence. - Spacers and motif occurences are indicated by o -d- `d' residues separate the end of the preceding motif occurrence and the start of the following motif occurrence o [n] occurrence of motif `n' with p-value less than 0.0001. ******************************************************************************** SEQUENCE NAME E-VALUE MOTIF DIAGRAM ------------- -------- ------------- ENTA_ECOLI 3.1e-14 [1]-[2]-224 DHII_HUMAN 1.6e-11 29-[1]-[2]-239 YINL_LISMO 6.8e-11 [1]-[2]-224 FIXR_BRAJA 7.8e-11 43-[2]-149-[1]-62 HDHA_ECOLI 7.8e-10 6-[1]-[2]-144-[1]-69 BUDC_KLETE 2.4e-09 9-[2]-53-[1]-81-[1]-62 AP27_MOUSE 4.1e-09 2-[1]-[2]-138-[1]-68 FVT1_HUMAN 4.3e-09 39-[2]-150-[1]-119 YRTP_BACSU 8.2e-09 1-[1]-[2]-145-[1]-56 DHMA_FLAS1 8e-08 9-[1]-[2]-147-[1]-78 HDE_CANTR 1.5e-07 3-[1]-[2]-290-[1]-[2]-565 3BHD_COMTE 1.9e-07 1-[1]-[2]-50-[1]-166 BDH_HUMAN 2.5e-07 50-[1]-[2]-269 2BHD_STREX 3.8e-07 1-[1]-[2]-142-[1]-76 BA72_EUBSP 4.1e-07 1-[1]-[2]-125-[2]-10-[1]-65 RIDH_KLEAE 6.5e-07 9-[1]-[2]-216 DHGB_BACME 6.7e-07 2-[1]-[2]-149-[1]-75 PCR_PEA 9e-07 81-[1]-[2]-108-[1]-174 RFBB_NEIGO 1.6e-06 1-[1]-[2]-321 BPHB_PSEPS 2.2e-06 [1]-[2]-251 DHB2_HUMAN 3.2e-06 77-[1]-[2]-286 NODG_RHIME 3.5e-06 1-[1]-[2]-142-[1]-66 MAS1_AGRRA 6.2e-06 252-[2]-36-[1]-164 DHCA_HUMAN 6.7e-06 11-[2]-54-[1]-101-[1]-74 DHES_HUMAN 9.5e-06 9-[2]-108-[1]-186 DHB3_HUMAN 1.9e-05 55-[2]-146-[1]-85 HMTR_LEIMA 2.7e-05 24-[2]-172-[1]-67 ADH_DROME 6.2e-05 13-[2]-217-[1]-1 YURA_MYXXA 0.00013 94-[2]-69-[1]-71 LIGD_PSEPA 0.00014 1-[1]-[2]-280 FABI_ECOLI 0.00018 1-[1]-161-[1]-76 GUTD_ECOLI 0.0031 147-[2]-10-[1]-78 CSGA_MYXXA 0.0074 12-[1]-53-[2]-77 ******************************************************************************** ******************************************************************************** SECTION III: ANNOTATED SEQUENCES ******************************************************************************** - The positions and p-values of the non-overlapping motif occurrences are shown above the actual sequence for each of the high-scoring sequences from Section I. - A motif occurrence is defined as a position in the sequence whose match to the motif has POSITION p-value less than 0.0001 as defined in Section II. - For each sequence, the first line specifies the name of the sequence. - The second (and possibly more) lines give a description of the sequence. - Following the description line(s) is a line giving the length, combined p-value, and E-value of the sequence as defined in Section I. - The next line reproduces the motif diagram from Section II. - The entire sequence is printed on the following lines. - Motif occurrences are indicated directly above their positions in the sequence on lines showing o the motif number of the occurrence, o the position p-value of the occurrence, o the best possible match to the motif, and o columns whose match to the motif has a positive score (indicated by a plus sign). ******************************************************************************** ENTA_ECOLI 2,3-DIHYDRO-2,3-DIHYDROXYBENZOATE DEHYDROGENASE (EC 1.3.1.28) LENGTH = 248 COMBINED P-VALUE = 9.46e-16 E-VALUE = 3.1e-14 DIAGRAM: [1]-[2]-224 [1] [2] 1.3e-12 3.4e-10 MDYQPKNIWVTGCSSGIGKATAKH ++++++++++++++++++++++++ 1 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDA DHII_HUMAN CORTICOSTEROID 11-BETA-DEHYDROGENASE (EC 1.1.1.146) (11-DH) (11-BETA- HYDROXYSTEROID DEHYDROGENASE) (11-BETA-HSD) LENGTH = 292 COMBINED P-VALUE = 4.98e-13 E-VALUE = 1.6e-11 DIAGRAM: 29-[1]-[2]-239 [1] [2] 8.4e-10 2.3e-10 MDYQPKNIWVTGCSSGIGKATAKH ++++++++++++++++++++++++ 1 MAFMKKYLLPILGLFMAYYYYSANEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVV YINL_LISMO HYPOTHETICAL 26.8 KD PROTEIN IN INLA 5'REGION (ORFA) LENGTH = 248 COMBINED P-VALUE = 2.07e-12 E-VALUE = 6.8e-11 DIAGRAM: [1]-[2]-224 [1] [2] 1.0e-08 1.2e-10 MDYQPKNIWVTGCSSGIGKATAKH ++++ ++++++++++++++++++ 1 MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQIIKANSGEAIFAKTDVTKREDNKKLVEL FIXR_BRAJA FIXR PROTEIN LENGTH = 278 COMBINED P-VALUE = 2.35e-12 E-VALUE = 7.8e-11 DIAGRAM: 43-[2]-149-[1]-62 [2] 2.6e-11 CSSGIGKATAKH +++++++++++ 1 MGLDLPNDNLIRGPLPEAHLDRLVDAVNARVDRGEPKVMLLTGASRGIGHATAKLFSEAGWRIISCARQPFDGER [1] 4.1e-08 MDYQPKNIWVTG +++++++++++ 151 APILLAQGLFDELRAASGSIVNVTSIAGSRVHPFAGSAYATSKAALASLTRELAHDYAPHGIRVNAIAPGEIRTD HDHA_ECOLI 7-ALPHA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.159) (HSDH) LENGTH = 255 COMBINED P-VALUE = 2.38e-11 E-VALUE = 7.8e-10 DIAGRAM: 6-[1]-[2]-144-[1]-69 [1] [2] 3.2e-06 1.3e-08 MDYQPKNIWVTGCSSGIGKATAKH +++ ++ +++++++ +++++++++ 1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQEL [1] 1.1e-09 MDYQPKNIWVTG +++++++++++ 151 NKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIA BUDC_KLETE ACETOIN(DIACETYL) REDUCTASE (EC 1.1.1.5) (ACETOIN DEHYDROGENASE) LENGTH = 241 COMBINED P-VALUE = 7.19e-11 E-VALUE = 2.4e-09 DIAGRAM: 9-[2]-53-[1]-81-[1]-62 [2] [ 3.4e-10 3 CSSGIGKATAKH M ++++++++++++ + 1 MQKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATATAVAAEINQAGGRAVAIKVDVSRRDQVFAAVEQARK 1] .4e-05 DYQPKNIWVTG +++ +++++ 76 ALGGFNVIVNNAGIAPSTPIESITEEIVDRVYNINVKGVIWGMQAAVEAFKKEGHGGKIVNACSQAGHVGNPELA [1] 1.5e-07 MDYQPKNIWVTG +++++ ++++++ 151 VYSSSKFAVRGLTQTAARDLAPLGITVNGFCPGIVKTPMWAEIDRQCRKRRANRWATARLNLPNASPLAACRSLK AP27_MOUSE ADIPOCYTE P27 PROTEIN (AP27) LENGTH = 244 COMBINED P-VALUE = 1.25e-10 E-VALUE = 4.1e-09 DIAGRAM: 2-[1]-[2]-138-[1]-68 [1] [2] 8.5e-06 1.0e-08 MDYQPKNIWVTGCSSGIGKATAKH + +++ +++++++++++++ ++++ 1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIG [1] 8.1e-09 MDYQPKNIWVTG +++++++++++ 151 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSD FVT1_HUMAN no comment LENGTH = 332 COMBINED P-VALUE = 1.29e-10 E-VALUE = 4.3e-09 DIAGRAM: 39-[2]-150-[1]-119 [2] 3.8e-10 CSSGIGKATAKH ++++++++++++ 1 MLLLAAAFLVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKE [1] 1.2e-07 MDYQPKNIWVTG +++++++++++ 151 YPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSASKFAIRGLAEALQMEVKPYNVYITVAYPPDTDTPGFA YRTP_BACSU HYPOTHETICAL 25.3 KD PROTEIN IN RTP 5'REGION (ORF238) LENGTH = 238 COMBINED P-VALUE = 2.48e-10 E-VALUE = 8.2e-09 DIAGRAM: 1-[1]-[2]-145-[1]-56 [1] [2] 1.3e-06 4.3e-10 MDYQPKNIWVTGCSSGIGKATAKH + ++ + +++++++++++++++++ 1 MQSLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEVKALGVKAAFAAADVKDADQVNQAVA [1] 4.2e-07 MDYQPKNIWVTG +++++++++++ 151 VTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDMSIELNLTDGNPEKVMQPEDLAEYMVAQLKLDPR DHMA_FLAS1 N-ACYLMANNOSAMINE 1-DEHYDROGENASE (EC 1.1.1.233) (NAM-DH) LENGTH = 270 COMBINED P-VALUE = 2.41e-09 E-VALUE = 8e-08 DIAGRAM: 9-[1]-[2]-147-[1]-78 [1] [2] 9.1e-08 1.7e-08 MDYQPKNIWVTGCSSGIGKATAKH +++++++++++++++++++++++ 1 TTAGVSRRPGRLAGKAAIVTGAAGGIGRATVEAYLREGASVVAMDLAPRLAATRYEEPGAIPIACDLADRAAIDA [1] 2.4e-05 MDYQPKNIWVTG +++ ++++++ 151 GSVNSFMAEPEAAAYVAAKGGVAMLTRAMAVDLARHGILVNMIAPGPVDVTGNNTGYSEPRLAEQVLDEVALGRP HDE_CANTR HYDRATASE-DEHYDROGENASE-EPIMERASE (HDE) LENGTH = 906 COMBINED P-VALUE = 4.40e-09 E-VALUE = 1.5e-07 DIAGRAM: 3-[1]-[2]-290-[1]-[2]-565 [1] [2] 1.4e-08 1.0e-05 MDYQPKNIWVTGCSSGIGKATAKH ++++++++++++++++++ + ++ 1 MSPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNV [1] [2] 2.3e-07 1.7e-08 MDYQPKNIWVTGCSSGIGKATAKH ++++++++++++ +++++++++ 301 TNEARKLPANDASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQ 3BHD_COMTE 3-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.51) LENGTH = 253 COMBINED P-VALUE = 5.69e-09 E-VALUE = 1.9e-07 DIAGRAM: 1-[1]-[2]-50-[1]-166 [1] [2] 1.4e-08 3.0e-07 MDYQPKNIWVTGCSSGIGKATAKH +++++++++++++++++++++++ 1 TNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQ [1] 7.9e-06 MDYQPKNIWVTG +++++ +++++ 76 RRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAG BDH_HUMAN D-BETA-HYDROXYBUTYRATE DEHYDROGENASE PRECURSOR (EC 1.1.1.30) (BDH) (3-HYDROXYBUTYRATE DEHYDROGENASE) (FRAGMENT) LENGTH = 343 COMBINED P-VALUE = 7.60e-09 E-VALUE = 2.5e-07 DIAGRAM: 50-[1]-[2]-269 [1] [2] 5.6e-08 5.4e-08 MDYQPKNIWVTGCSSGIGKATAKH ++++++++++++++++ +++++++ 1 GLRPPPPGRFSRLPGKTLSACDRENGARRPLLLGSTSFIPIGRRTYASAAEPVGSKAVLVTGCDSGFGFSLAKHL 2BHD_STREX 20-BETA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.53) LENGTH = 255 COMBINED P-VALUE = 1.14e-08 E-VALUE = 3.8e-07 DIAGRAM: 1-[1]-[2]-142-[1]-76 [1] [2] 7.2e-09 1.2e-06 MDYQPKNIWVTGCSSGIGKATAKH ++++++ +++++++++++ + +++ 1 MNDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAR [1] 8.5e-06 MDYQPKNIWVTG ++++ +++++ 151 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL BA72_EUBSP 7-ALPHA-HYDROXYSTEROID DEHYDROGENASE (EC 1.1.1.159) (BILE ACID 7-DEHYDROXYLASE) (BILE ACID-INDUCIBLE PROTEIN) LENGTH = 249 COMBINED P-VALUE = 1.24e-08 E-VALUE = 4.1e-07 DIAGRAM: 1-[1]-[2]-125-[2]-10-[1]-65 [1] [2] 4.3e-05 2.3e-08 MDYQPKNIWVTGCSSGIGKATAKH + +++++ +++++ ++++++ ++ 1 MNLVQDKVTIITGGTRGIGFAAAKIFIDNGAKVSIFGETQEEVDTALAQLKELYPEEEVLGFAPDLTSRDAVMAA [2] [1] 2.2e-05 4.2e-07 CSSGIGKATAKH MDYQPKNIWVTG + +++++ ++ +++ +++++ + 151 SLSGVGYPASKASVIGLTHGLGREIIRKNIRVVGVAPGVVNTDMTNGNPPEIMEGYLKALPMKRMLEPEEIANVY RIDH_KLEAE RIBITOL 2-DEHYDROGENASE (EC 1.1.1.56) (RDH) LENGTH = 249 COMBINED P-VALUE = 1.97e-08 E-VALUE = 6.5e-07 DIAGRAM: 9-[1]-[2]-216 [1] [2] 4.0e-06 4.0e-09 MDYQPKNIWVTGCSSGIGKATAKH ++++++ +++++++++++++++ 1 MKHSVSSMNTSLSGKVAAITGAASGIGLECARTLLGAGAKVVLIDREGEKLNKLVAELGENAFALQVDLMQADQV DHGB_BACME GLUCOSE 1-DEHYDROGENASE B (EC 1.1.1.47) LENGTH = 262 COMBINED P-VALUE = 2.04e-08 E-VALUE = 6.7e-07 DIAGRAM: 2-[1]-[2]-149-[1]-75 [1] [2] 5.0e-07 3.0e-07 MDYQPKNIWVTGCSSGIGKATAKH +++ ++++ +++++ +++++++++ 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEEIKKVGGEAIAVKGDVTVESDVIN [1] 5.0e-08 MDYQPKNIWVTG +++++++++++ 151 KIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEE PCR_PEA no comment LENGTH = 399 COMBINED P-VALUE = 2.73e-08 E-VALUE = 9e-07 DIAGRAM: 81-[1]-[2]-108-[1]-174 [1] [2] 1.0e-05 1.4e-09 MDYQPKNIWVTGCSSGIGKATAKH +++++ ++ +++++++++++++++ 76 SSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMACRDYLKAARAAKSAGLAKENYTIMHLDLASLDS [1] 6.1e-06 MDYQPKNIWVTG +++ +++ ++ + 151 VRQFVDNFRRSEMPLDVLINNAAVYFPTAKEPSFTADGFEISVGTNHLGHFLLSRLLLEDLKKSDYPSKRLIIVG RFBB_NEIGO no comment LENGTH = 346 COMBINED P-VALUE = 4.86e-08 E-VALUE = 1.6e-06 DIAGRAM: 1-[1]-[2]-321 [1] [2] 2.4e-08 8.5e-07 MDYQPKNIWVTGCSSGIGKATAKH ++ ++++++++++++ ++ +++++ 1 MQTEGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICDRAELDRVF BPHB_PSEPS BIPHENYL-CIS-DIOL DEHYDROGENASE (EC 1.3.1.-) LENGTH = 275 COMBINED P-VALUE = 6.58e-08 E-VALUE = 2.2e-06 DIAGRAM: [1]-[2]-251 [1] [2] 2.1e-07 2.2e-07 MDYQPKNIWVTGCSSGIGKATAKH + +++ ++++++++++++++++ + 1 MKLKGEAVLITGGASGLGRALVDRFVAEAKVAVLDKSAERLAELETDLGDNVLGIVGDVRSLEDQKQAASRCVAR DHB2_HUMAN no comment LENGTH = 387 COMBINED P-VALUE = 9.76e-08 E-VALUE = 3.2e-06 DIAGRAM: 77-[1]-[2]-286 [1] [2] 4.6e-07 7.5e-08 MDYQPKNIWVTGCSSGIGKATAKH +++ ++++++++++++++++++++ 76 ELLPVDQKAVLVTGGDCGLGHALCKYLDELGFTVFAGVLNENGPGAEELRRTCSPRLSVLQMDITKPVQIKDAYS NODG_RHIME NODULATION PROTEIN G (HOST-SPECIFICITY OF NODULATION PROTEIN C) LENGTH = 245 COMBINED P-VALUE = 1.05e-07 E-VALUE = 3.5e-06 DIAGRAM: 1-[1]-[2]-142-[1]-66 [1] [2] 3.0e-06 3.0e-07 MDYQPKNIWVTGCSSGIGKATAKH ++ + +++++++++ ++ ++++ 1 MFELTGRKALVTGASGAIGGAIARVLHAQGAIVGLHGTQIEKLETLATELGDRVKLFPANLANRDEVKALGQRAE [1] 3.2e-07 MDYQPKNIWVTG +++++ ++++++ 151 NYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNHKQKEKIMVAIPIHRMGTGTEVASAVAYLAS MAS1_AGRRA no comment LENGTH = 476 COMBINED P-VALUE = 1.89e-07 E-VALUE = 6.2e-06 DIAGRAM: 252-[2]-36-[1]-164 [2] 2.3e-08 CSSGIGKATAKH ++++++++++++ 226 GRVLHFRRGFSHWTVEIHQSPVILVSGSNRGVGKAIAEDLIAHGYRLSLGARKVKDLEVAFGPQDEWLHYARFDA [1] 1.9e-06 MDYQPKNIWVTG +++++++++++ 301 EDHGTMAAWVTAAVEKFGRIDGLVNNAGYGEPVNLDKHVDYQRFHLQWYINCVAPLRMTELCLPHLYETGSGRIV DHCA_HUMAN no comment LENGTH = 276 COMBINED P-VALUE = 2.04e-07 E-VALUE = 6.7e-06 DIAGRAM: 11-[2]-54-[1]-101-[1]-74 [2] 7.2e-09 CSSGIGKATAKH ++++++++++++ 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF [1] 2.1e-05 MDYQPKNIWVTG +++++ ++++ 76 LRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCS [1] 2.7e-05 MDYQPKNIWVTG + ++ +++ ++ 151 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNAC DHES_HUMAN ESTRADIOL 17 BETA-DEHYDROGENASE (EC 1.1.1.62) (20 ALPHA-HYDROXYSTEROID DEHYDROGENASE) (E2DH) (17-BETA-HSD) (PLACENTAL 17-BETA-HYDROXYSTEROID DEHYDROGENASE) LENGTH = 327 COMBINED P-VALUE = 2.88e-07 E-VALUE = 9.5e-06 DIAGRAM: 9-[2]-108-[1]-186 [2] 2.3e-08 CSSGIGKATAKH ++++++++++ + 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAA [1] 6.5e-06 MDYQPKNIWVTG ++ ++ ++++++ 76 RERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLP DHB3_HUMAN no comment LENGTH = 310 COMBINED P-VALUE = 5.89e-07 E-VALUE = 1.9e-05 DIAGRAM: 55-[2]-146-[1]-85 [2] 6.4e-08 CSSGIGKATAKH ++ ++++++ + 1 MGDVLEQFFILTGLLVCLACLAKCVRFSRCVLLNYYKVLPKSFLRSMGQWAVITGAGDGIGKAYSFELAKRGLNV [1] 5.7e-06 MDYQPKNIWVTG ++++ + +++ 151 QSLIHCNITSVVKMTQLILKHMESRQKGLILNISSGIALFPWPLYSMYSASKAFVCAFSKALQEEYKAKEVIIQV HMTR_LEIMA no comment LENGTH = 287 COMBINED P-VALUE = 8.19e-07 E-VALUE = 2.7e-05 DIAGRAM: 24-[2]-172-[1]-67 [2] 7.3e-06 CSSGIGKATAKH + + +++++++ 1 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVS [1] 8.2e-08 MDYQPKNIWVTG +++++ ++++++ 151 PYFLIKAFAHRSRHPSQASRTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL ADH_DROME ALCOHOL DEHYDROGENASE (EC 1.1.1.1) LENGTH = 255 COMBINED P-VALUE = 1.89e-06 E-VALUE = 6.2e-05 DIAGRAM: 13-[2]-217-[1]-1 [2] 2.2e-07 CSSGIGKATAKH + +++++ + ++ 1 SFTLTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINPKVTVTFYPYDVTVPIAETTKL [1] 8.5e-06 MDYQPKNIWVTG + +++++++ ++ 226 IELNQNGAIWKLDLGTLEAIQWTKHWDSGI YURA_MYXXA no comment LENGTH = 258 COMBINED P-VALUE = 3.91e-06 E-VALUE = 0.00013 DIAGRAM: 94-[2]-69-[1]-71 [2] 4.8e-05 CSSGIGKATAKH ++ +++ + 76 TLERIRALDAEAGGLDLVVANAGVGGTTNAKRLPWERVRGIIDTNVTGAAATLSAVLPQMVERKRGHLVGVSSLA [1] 8.2e-08 MDYQPKNIWVTG +++++++++++ 151 GFRGLPATRYSASKAFLSTFMESLRVDLRGTGVRVTCIYPGFVKSELTATNNFPMPFLMETHDAVELMGKGIVRG LIGD_PSEPA C ALPHA-DEHYDROGENASE (EC -.-.-.-) LENGTH = 305 COMBINED P-VALUE = 4.10e-06 E-VALUE = 0.00014 DIAGRAM: 1-[1]-[2]-280 [1] [2] 8.8e-07 3.3e-06 MDYQPKNIWVTGCSSGIGKATAKH ++++++++ +++++++ ++ ++ 1 MKDFQDQVAFITGGASGAGFGQAKVFGQAGAKIVVADVRAEAVEKAVAELEGLGITAHGIVLDIMDREAYARAAD FABI_ECOLI no comment LENGTH = 262 COMBINED P-VALUE = 5.35e-06 E-VALUE = 0.00018 DIAGRAM: 1-[1]-161-[1]-76 [1] 4.1e-08 MDYQPKNIWVTG ++++++++++ 1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMF [1] 6.1e-05 MDYQPKNIWVTG + ++ +++++ 151 RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDV GUTD_ECOLI SORBITOL-6-PHOSPHATE 2-DEHYDROGENASE (EC 1.1.1.140) (GLUCITOL-6- PHOSPHATE DEHYDROGENASE) (KETOSEPHOSPHATE REDUCTASE) LENGTH = 259 COMBINED P-VALUE = 9.46e-05 E-VALUE = 0.0031 DIAGRAM: 147-[2]-10-[1]-78 [2] 2.3 CSS +++ 76 DEIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH [1] e-05 5.3e-06 GIGKATAKH MDYQPKNIWVTG +++ ++ +++++++++++ 151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGC CSGA_MYXXA no comment LENGTH = 166 COMBINED P-VALUE = 2.25e-04 E-VALUE = 0.0074 DIAGRAM: 12-[1]-53-[2]-77 [1] 6.8e-05 MDYQPKNIWVTG ++ ++ +++ 1 MRAFATNVCTGPVDVLINNAGVSGLWCALGDVDYADMARTFTINALGPLRVTSAMLPGLRQGALRRVAHVTSRMG [2] 1.2e-05 CSSGIGKATAKH ++ + +++++ 76 SLAANTDGGAYAYRMSKAALNMAVRSMSTDLRPEGFVTVLLHPGWVQTDMGGPDATLPAPDSVRGMLRVIDGLNP ******************************************************************************** CPU: Timothys-Mac-Mini.local Time 0.008 secs. mast -oc results/mast21 -nostatus /Users/t.bailey/meme_git/meme-xstreme/tests/meme/meme.adh.de.oops.html common/adh.s