GLAM2: Gapped Local Alignment of Motifs Version 1056 /Users/t.bailey/meme_git/meme-xstreme/src/glam2 -M -r 3 -n 100 -O results/glam2_1 p common/At.s Sequences: 19 Greatest sequence length: 1112 Residue counts: A=538 C=175 D=553 E=721 F=419 G=664 H=244 I=516 K=663 L=1000 M=235 N=484 P=466 Q=340 R=623 S=922 T=503 V=633 W=108 Y=326 x=0 Score: 675.899 Columns: 29 Sequences: 19 ***************************** At1g01140.1_ 196 YDGAAADVWSCGVILFVLMAGYLPFDEPN 224 + 60.0 At1g01140.2_ 196 YDGAAADVWSCGVILFVLMAGYLPFDEPN 224 + 60.0 At1g01140.3_ 196 YDGAAADVWSCGVILFVLMAGYLPFDEPN 224 + 60.0 At1g01450.1_ 221 KYSDKSDVYSFGMVSFELLTGKVPFEDSH 249 + 43.1 At1g01540.1_ 332 MLNEKSDIYSFGILIMEIITGRNPVDYSR 360 + 57.3 At1g01540.2_ 332 MLNEKSDIYSFGILIMEIITGRNPVDYSR 360 + 57.3 At1g01560.1_ 217 EYTAAIDIWSVGCILGEIMTRE.PLFPGR 244 + 52.5 At1g01740.1_ 225 RITAESVIYSFGTLLLDLLTGK.HIPPSH 252 + 24.0 At1g02970.1_ 420 EHLDKVDIFSLGVTVYELIKGS.PLTESR 447 + 36.6 At1g03740.1_ 390 HYGVGVDLWSTGCILGELYAGK.PILPGK 417 + 33.4 At1g03920.1_ 351 GYGMECDWWSLGAIMYEMLVGY.PPFYAD 378 + 29.8 At1g03930.1_ 189 EQSRRDDLEALGYVLMYFLKGSLPWQGLK 217 + 37.8 At1g04210.1_ 999 FYGLEVDIWSFGCLIFELLTLQNPYFDLS 1027 + 45.3 At1g04440.1_ 189 EQSRRDDLESLGYLLMYFLRGSLPWQGLR 217 + 38.9 At1g04700.1_ 951 RVSEKVDVFSFGIVMWEILTGEEPYANLH 979 + 42.5 At1g05100.1_ 180 RQGKESDIWAVGCTVIEMVTGSQPWIGAD 208 + 40.0 At1g05700.1_ 737 GLNEKSDIYSFGVVLLEMITGKTVIKESQ 765 + 43.4 At1g06390.1_ 247 EYTASIDIWSAGCVLAELLLGQ.PLFPGE 274 + 55.7 At1g06390.2_ 247 EYTASIDIWSAGCVLAELLLGQ.PLFPGE 274 + 55.7 EYGAKSDIWSFGCILFELLTGKLPFDESR SEAV VY L VV M IIA SN LFPG T E L M Y L A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 0 0 0 6 1 2 1 0 1 0 2 0 0 0 3 0 0 0 0 3 0 5.92 0 -0.102 0 0 3 0 0 0 1 1 0 3 0 0 0 3 0 0 0 1 0 7 0 13.8 0 -0.102 0 0 0 0 0 7 0 0 0 1 0 3 0 0 0 4 4 0 0 0 0 14.8 0 -0.102 7 0 2 4 0 0 0 0 1 1 1 0 0 0 2 0 0 1 0 0 0 6.36 0 -0.102 4 0 0 4 0 1 0 0 6 0 0 0 0 0 2 2 0 0 0 0 0 12.2 0 -0.102 3 1 2 0 0 0 0 3 0 0 0 0 0 0 0 6 0 4 0 0 0 8.57 0 -0.102 0 0 18 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 59.2 0 -0.102 0 0 0 0 0 0 0 10 0 3 0 0 0 0 0 0 0 5 1 0 0 34.2 0 -0.102 0 0 0 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 10 5 0 54.4 0 -0.102 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 48.7 0 -0.102 2 3 0 0 7 0 0 0 0 4 0 0 0 0 0 0 1 2 0 0 0 18.7 0 -0.102 0 0 0 0 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64.0 0 -0.102 1 6 0 0 0 0 0 3 0 0 1 0 0 0 0 0 1 5 0 2 0 22.1 0 -0.102 0 0 0 0 0 0 0 6 0 5 0 0 0 0 0 0 2 6 0 0 0 26.6 0 -0.102 0 0 0 0 0 0 0 3 0 11 2 0 0 0 0 1 0 2 0 0 0 25.2 0 -0.102 2 0 0 0 5 2 0 1 0 2 4 0 0 0 0 0 0 0 1 2 0 10.8 0 -0.102 0 0 1 13 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 2 0 30.7 0 -0.102 0 0 0 0 2 0 0 4 0 10 3 0 0 0 0 0 0 0 0 0 0 33.4 0 -0.102 0 0 0 0 0 0 0 4 0 9 4 0 0 0 0 0 0 1 0 1 0 29.1 0 -0.102 4 0 0 0 0 0 0 0 2 2 0 0 0 0 1 0 9 1 0 0 0 13.8 0 -0.102 0 0 0 0 0 17 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 45.9 0 -0.102 0 0 0 2 0 0 0 0 4 0 0 0 0 3 2 4 0 0 0 4 0 12.6 0 -0.102 0 0 0 1 0 0 0 0 0 5 0 3 0 1 0 0 1 1 0 0 7 -19.9 0 -0.102 0 0 0 0 0 0 1 0 0 0 0 0 17 0 0 0 0 1 0 0 0 55.5 0 -0.102 0 0 0 0 4 0 0 3 0 4 0 0 1 0 0 0 0 2 3 2 0 14.6 0 -0.102 1 0 5 1 5 0 0 1 1 1 0 0 1 2 0 0 1 0 0 0 0 2.44 0 -0.102 0 0 2 5 0 3 0 0 0 0 0 1 5 0 0 0 0 0 0 3 0 12.7 0 -0.102 2 0 0 0 0 4 0 0 0 4 0 0 3 0 0 6 0 0 0 0 0 10.1 0 -0.102 0 0 2 2 0 0 3 0 2 0 0 3 0 1 5 1 0 0 0 0 0 12.3 Score: 313.467 Columns: 30 Sequences: 15 ***.***..***********.************* At1g01140.1_ 11 ASRTRVG..NYEMG.RTLGE.GSFA.KVKYAKNT 39 + 57.6 At1g01140.2_ 11 ASRTRVG..NYEMG.RTLGE.GSFA.KVKYAKNT 39 + 57.6 At1g01140.3_ 11 ASRTRVG..NYEMG.RTLGE.GSFA.KVKYAKNT 39 + 57.6 At1g01540.1_ 291 QWNAKVS..DFGLA.KLLGSESSYV.TTRVMGTF 320 + 29.5 At1g01540.2_ 291 QWNAKVS..DFGLA.KLLGSESSYV.TTRVMGTF 320 + 29.5 At1g01560.1_ 178 CDL.KIG..DFGLA.RTKSE.TDFM.TEYVVTRW 205 + 5.53 At1g02970.1_ 242 LSR.YLT..DFHEI.RQIGA.GHFS.RVFKVLKR 269 + 13.6 At1g03740.1_ 206 APR.RAN..TFEKL.EKIGQ.GTYS.SVYRARDL 233 + 15.3 At1g03920.1_ 127 LQRHKMGADDFELL.TMIGK.GAFG.EVRVVREI 157 + 27.8 At1g03930.1_ 1 MDL.VIGG.KFKLG.RKIGS.GSFG.ELYLGINV 29 + 38.8 At1g04440.1_ 1 MDR.VVGG.KFKLG.RKLGS.GSFG.EIFLGVNV 29 + 43.3 At1g04700.1_ 758 LQIIKNT..DLEDL.HELGS.GTFG.TVYYGKWR 786 + 22.8 At1g05700.1_ 554 ADVIKMT..N.NFG.QVLGK.GGFG.TVYHGFYD 581 + 17.0 At1g06390.1_ 62 GEP.KQT..ISYMAERVVGT.GSFG.IVFQAKCL 90 + 41.9 At1g06390.2_ 62 GEP.KQT..ISYMAERVVGT.GSFG.IVFQAKCL 90 + 41.9 ADR KVG DFELGERTLGS GSFG TVYVAKNL LS R T NYGMA KI E YA E FYG T L V K K V R A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 5 1 0 0 0 2 0 0 0 3 2 0 0 2 0 0 0 0 0 0 0 3.42 0 -0.0953 0 0 4 2 0 0 0 0 0 0 0 0 1 2 0 4 0 0 2 0 0 8.37 0 -0.0953 0 0 0 0 0 0 0 1 0 2 0 2 2 0 7 0 0 1 0 0 0 7.99 8 -27.6 0 0 0 0 0 0 0 0 8 0 0 0 0 0 4 0 0 2 0 1 0 21.1 0 -0.0953 1 0 0 0 0 0 0 2 0 1 2 1 0 2 0 0 0 6 0 0 0 7.29 0 -0.0953 0 0 0 0 0 7 0 0 0 0 0 1 0 0 0 2 5 0 0 0 0 17.7 4 -19.6 0 0 6 0 0 0 0 2 2 0 0 4 0 0 0 0 1 0 0 0 0 13.0 0 -0.0953 0 0 0 0 8 0 0 0 0 1 0 0 0 0 0 2 0 0 0 3 1 18.6 0 -0.0953 0 0 0 6 0 3 1 0 2 0 0 1 0 0 0 0 0 0 0 2 0 8.77 0 -0.0953 0 0 1 1 1 0 0 0 1 6 5 0 0 0 0 0 0 0 0 0 0 11.2 0 -0.0953 5 0 0 0 0 6 0 1 0 3 0 0 0 0 0 0 0 0 0 0 0 11.4 0 -0.0953 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 -13.8 0 -0.0953 0 0 0 1 0 0 1 0 2 0 0 0 0 1 9 0 1 0 0 0 0 20.2 0 -0.0953 0 0 0 1 0 0 0 0 3 2 1 0 0 1 0 0 4 3 0 0 0 2.87 0 -0.0953 0 0 0 0 0 0 0 4 1 8 0 0 0 0 0 0 0 2 0 0 0 18.9 0 -0.0953 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 42.2 0 -0.0953 1 0 0 4 0 0 0 0 2 0 0 0 0 1 0 5 2 0 0 0 0 9.15 2 -13.8 0 0 0 0 0 12 0 0 0 0 0 0 0 0 0 2 1 0 0 0 0 30.2 0 -0.0953 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 9 2 0 0 0 0 13.2 0 -0.0953 0 0 0 0 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 49.2 0 -0.0953 3 0 0 0 0 7 0 0 0 0 1 0 0 0 0 2 0 2 0 0 0 11.8 0 -0.0953 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 -11.1 0 -0.0953 0 0 0 3 0 0 0 2 3 0 0 0 0 0 1 1 5 0 0 0 0 8.14 0 -0.0953 0 0 0 1 0 0 0 1 0 1 0 0 0 0 0 0 2 10 0 0 0 20.4 0 -0.0953 0 0 0 0 4 0 0 0 3 0 0 0 0 0 3 0 0 0 0 5 0 20.4 0 -0.0953 0 0 0 0 0 0 1 0 1 2 0 0 0 2 1 0 0 4 0 4 0 6.31 0 -0.0953 6 0 0 0 0 4 0 0 0 0 2 0 0 0 0 0 0 3 0 0 0 15.0 0 -0.0953 0 0 0 0 1 2 0 1 6 1 0 0 0 0 2 0 1 1 0 0 0 2.03 0 -0.0953 0 2 1 1 0 0 0 0 1 0 0 5 0 0 1 0 2 0 1 1 0 2.48 0 -0.0953 0 0 1 0 2 0 0 1 0 3 0 0 0 0 2 0 3 2 1 0 0 0.646 Score: 195.180 Columns: 22 Sequences: 18 ********************** At1g01140.1_ 314 PVSMNAFELISSSSEFSLENLF 335 + 38.5 At1g01140.2_ 316 PVSMNAFELISSSSEFSLENLF 337 + 38.5 At1g01140.3_ 314 PVSMNAFELISSSSEFSLENLF 335 + 38.5 At1g01450.1_ 259 IR.AGERPLFPFNSPKFITNLT 279 + 18.2 At1g01540.1_ 6 AAFLNT.ELSKPTSIFGLR.LW 25 + 22.2 At1g01540.2_ 6 AAFLNT.ELSKPTSIFGLR.LW 25 + 22.2 At1g01560.1_ 132 IR.SNQ.PLTDDHSRFFLYQLL 151 + 18.0 At1g01740.1_ 268 SCLEGQFS.DSDGTE.LVR.LT 286 + 1.59 At1g02970.1_ 453 IK.EGKLPLLPGHSL.QLQQLL 472 + 15.3 At1g03740.1_ 406 ELYAGK.PILPGKTE..VEQLH 424 + 10.9 At1g03920.1_ 401 RLSRGARDLI.GKLLCSVNQRL 421 + 16.7 At1g03930.1_ 140 RK.ANQVYIIDFGLGKKYRDLQ 160 + 23.0 At1g04210.1_ 85 KFFSNEIDLFPPELG.NLVNLE 105 + 11.2 At1g04440.1_ 140 RK.ANQVYIIDYGLAKKYRDLQ 160 + 19.6 At1g04700.1_ 335 RNSFGQ.Q.SPPTSPFSVHKRA 354 + 7.44 At1g05700.1_ 388 PCLPND.YIW.EGLNCSYDSLT 407 + 12.2 At1g06390.1_ 263 ELLLGQ.PLF.PGEN.SVDQLV 281 + 24.2 At1g06390.2_ 263 ELLLGQ.PLF.PGEN.SVDQLV 281 + 24.2 PLSANQFPLIPPGSEFSLRQL R LLGAREIFS L K VEN F V D A C D E F G H I K L M N P Q R S T V W Y Del Ins Score 2 0 0 3 0 0 0 3 1 0 0 0 4 0 4 1 0 0 0 0 0 5.92 0 -0.100 2 2 0 0 1 0 0 0 3 4 0 1 0 0 2 0 0 3 0 0 0 0.904 0 -0.100 0 0 0 0 3 0 0 0 0 4 0 0 0 0 0 5 0 0 0 1 5 -7.25 0 -0.100 4 0 0 2 1 0 0 0 0 4 3 0 1 0 1 2 0 0 0 0 0 1.59 0 -0.100 0 0 0 0 0 8 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 44.2 0 -0.100 4 0 1 2 0 0 0 0 2 0 0 0 0 7 0 0 2 0 0 0 0 16.8 0 -0.100 0 0 0 0 4 0 0 1 0 1 0 0 0 0 2 0 0 2 0 0 8 -15.8 0 -0.100 0 0 2 5 0 0 0 0 0 0 0 0 6 1 0 1 0 0 0 3 0 14.7 0 -0.100 0 0 0 0 0 0 0 4 0 12 0 0 0 0 0 0 0 0 0 0 2 24.0 0 -0.100 0 0 1 0 4 0 0 6 0 2 0 0 0 0 0 3 1 0 1 0 0 9.31 0 -0.100 0 0 3 0 0 0 0 0 2 0 0 0 5 0 0 4 0 0 0 0 4 -3.85 0 -0.100 0 0 2 1 2 3 0 0 0 0 0 0 6 0 0 3 0 0 0 1 0 6.07 0 -0.100 0 0 0 1 0 6 2 0 2 0 0 1 0 0 0 3 3 0 0 0 0 9.32 0 -0.100 0 0 0 2 0 0 0 0 0 5 0 0 0 0 0 9 2 0 0 0 0 17.4 0 -0.100 1 0 0 5 0 2 0 2 0 2 0 3 2 0 1 0 0 0 0 0 0 -0.929 0 -0.100 0 2 0 0 7 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 6 -1.12 0 -0.100 0 0 0 0 2 2 0 0 2 1 0 1 0 1 0 8 0 0 0 0 1 -1.17 0 -0.100 0 0 0 0 0 0 0 1 0 8 0 0 0 0 0 0 0 6 0 3 0 25.5 0 -0.100 0 0 3 4 0 0 1 0 0 0 0 1 0 1 5 0 1 1 0 1 0 4.77 0 -0.100 0 0 2 0 0 0 0 0 1 0 0 5 0 6 0 1 0 0 0 0 3 4.15 0 -0.100 0 0 0 0 0 0 0 0 0 16 0 0 0 0 2 0 0 0 0 0 0 40.2 0 -0.100 1 0 0 1 3 0 1 0 0 3 0 0 0 2 0 0 3 2 2 0 0 2.66