db_index motif_id motif_alt_id consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 3 MA0493.1 Klf1 RRCCACACCCW 8.4e-78 6.0e-81 -184.72 0.0 100.0 490 356 647 0.20408 2.4e-83 244 2 1-RCCACACCCWD STREME-1 RCCACACCCWD 1.6e-73 1.2e-76 -174.84 0.0 102.0 490 331 587 0.20816 4.8e-79 244 1 WGGGTGTGGYYS MEME-1 WGGGTGTGGYYS 4.4e-73 3.1e-76 -173.86 0.0 109.0 489 376 674 0.22290 1.3e-78 244 3 MA0742.1 Klf12 GRCCACGCCCWHHWH 5.8e-70 4.1e-73 -166.68 0.0 104.0 486 280 456 0.21399 1.7e-75 242 3 MA0599.1 KLF5 GCCCCDCCCH 8.5e-43 6.0e-46 -104.12 0.0 105.0 491 308 653 0.21385 2.5e-48 245 3 MA0039.3 KLF4 MCACACCCTNN 1.1e-42 8.0e-46 -103.84 0.0 132.0 490 394 758 0.26939 3.3e-48 244 1 NWGATAAG MEME-2 NWGATAAG 2.6e-42 1.9e-45 -103.00 0.0 183.0 493 347 501 0.37120 7.6e-48 246 3 MA1107.1 KLF9 VSCCACACCCACH 6.3e-40 4.5e-43 -97.51 0.0 106.0 488 315 681 0.21721 1.8e-45 243 3 MA0035.3 Gata1 TYCTTATCTSY 1.9e-38 1.3e-41 -94.13 0.0 184.0 490 320 459 0.37551 5.4e-44 244 3 MA0746.1 SP3 VCCACGCCCMC 8.4e-36 5.9e-39 -88.02 0.0 110.0 490 338 759 0.22449 2.4e-41 244 3 MA0037.3 GATA3 WGATAASR 5.1e-35 3.6e-38 -86.22 0.0 185.0 493 429 683 0.37525 1.5e-40 246 3 MA0300.1 GAT1 YYGATAAG 7.4e-35 5.3e-38 -85.84 0.0 183.0 493 348 529 0.37120 2.1e-40 246 2 2-ACWGATAAS STREME-2 ACWGATAAS 3.0e-34 2.1e-37 -84.44 0.0 168.0 492 439 763 0.34146 8.7e-40 245 3 MA0766.1 GATA5 WGATAASR 1.5e-33 1.0e-36 -82.85 0.0 125.0 493 369 785 0.25355 4.2e-39 246 3 MA0036.3 GATA2 NBCTTATCTNH 5.7e-33 4.0e-36 -81.51 0.0 184.0 490 433 700 0.37551 1.6e-38 244 3 MA0140.2 GATA1::TAL1 MTTATCWSNNNNNHVCAG 1.3e-32 9.4e-36 -80.66 0.0 145.0 483 251 413 0.30021 3.9e-38 241 3 MA0740.1 KLF14 KRCCACGCCCMCYT 3.1e-32 2.2e-35 -79.79 0.0 97.0 487 192 391 0.19918 9.2e-38 243 3 MA0309.1 GZF3 YGATAASR 3.3e-32 2.3e-35 -79.76 0.0 151.0 493 322 567 0.30629 9.4e-38 246 3 MA0289.1 DAL80 CGATAAG 7.1e-32 5.0e-35 -78.98 0.0 138.0 494 308 578 0.27935 2.0e-37 246 3 MA0270.1 AFT2 SACACCCB 3.0e-30 2.2e-33 -75.22 0.0 129.0 493 246 457 0.26166 8.8e-36 246 3 MA0482.1 Gata4 YCTTATCTSHB 2.2e-29 1.6e-32 -73.24 0.0 196.0 490 344 513 0.40000 6.4e-35 244 3 MA0307.1 GLN3 GATAA 2.2e-29 1.6e-32 -73.22 0.0 186.0 496 473 801 0.37500 6.4e-35 247 3 MA0741.1 KLF16 GMCACGCCCCC 3.5e-24 2.5e-27 -61.27 0.0 106.0 490 264 634 0.21633 1.0e-29 244 3 MA0747.1 SP8 RCCACGCCCMCY 3.8e-23 2.7e-26 -58.87 0.0 77.0 489 227 692 0.15746 1.1e-28 244 3 MA1104.1 GATA6 NDNAGATAAGADD 2.1e-22 1.5e-25 -57.19 0.0 176.0 488 411 734 0.36066 6.0e-28 243 3 MA1399.1 At5g08520 DWWDWRGATAAGR 2.0e-19 1.4e-22 -50.30 0.0 176.0 488 240 388 0.36066 5.9e-25 243 3 MA1192.1 At5g58900 WDWRGATAAGRTTWD 1.4e-15 1.0e-18 -41.43 0.0 182.0 486 255 425 0.37449 4.2e-21 242 3 MA0450.1 hkb KGGGCGTGA 5.8e-15 4.1e-18 -40.03 0.0 96.0 492 127 292 0.19512 1.7e-20 245 3 MA0542.1 elt-3 TCTTATCA 2.0e-12 1.4e-15 -34.21 0.0 95.0 493 70 132 0.19270 5.6e-18 246 3 MA0807.1 TBX5 AGGTGTKA 1.1e-11 7.9e-15 -32.48 0.0 119.0 493 304 812 0.24138 3.2e-17 246 3 MA1188.1 At3g11280 AWYCTTATCTTHWY 3.4e-11 2.4e-14 -31.36 0.0 179.0 487 294 542 0.36756 9.8e-17 243 3 MA0199.1 Optix TGATA 7.0e-11 4.9e-14 -30.64 0.0 156.0 496 248 506 0.31452 2.0e-16 247 3 MA0803.1 TBX15 AGGTGTGA 5.6e-10 3.9e-13 -28.56 0.0 99.0 493 191 551 0.20081 1.6e-15 246 3 MA0801.1 MGA AGGTGTGA 6.3e-10 4.4e-13 -28.44 0.0 99.0 493 229 699 0.20081 1.8e-15 246 3 MA0657.1 KLF13 RTGMCACGCCCCTTTTTG 2.2e-9 1.6e-12 -27.18 0.0 65.0 483 48 109 0.13458 6.5e-15 241 3 MA1186.1 At1g49010 HWWAWYCTTATCYWH 3.2e-9 2.3e-12 -26.82 0.0 126.0 486 224 545 0.25926 9.3e-15 242 3 MA0806.1 TBX4 AGGTGTGA 6.5e-8 4.6e-11 -23.80 0.0 123.0 493 281 761 0.24949 1.9e-13 246 3 MA0685.1 SP4 BWRGCCACGCCCMCTYH 8.5e-8 6.0e-11 -23.53 0.0 106.0 484 80 169 0.21901 2.5e-13 241 2 3-CCCCKCCC STREME-3 CCCCKCCC 2.0e-7 1.5e-10 -22.65 0.0 107.0 493 203 589 0.21704 5.9e-13 246 3 MA1196.1 At5g05790 AWYCTTATCYTNWTH 4.6e-7 3.2e-10 -21.85 0.0 184.0 486 251 465 0.37860 1.3e-12 242 3 MA0733.1 EGR4 NHMCGCCCACGCAHWT 6.0e-7 4.2e-10 -21.58 0.0 47.0 485 96 468 0.09691 1.8e-12 242 3 MA0079.3 SP1 GCCCCKCCCCC 8.1e-6 5.7e-9 -18.98 0.0 112.0 490 198 561 0.22857 2.4e-11 244 3 MA0443.1 btd RRGGGGCGKR 1.1e-5 7.8e-9 -18.67 0.0 95.0 491 144 442 0.19348 3.2e-11 245 2 6-AAACGCCCW STREME-6 AAACGCCCW 1.8e-5 1.3e-8 -18.17 0.0 102.0 492 115 311 0.20732 5.3e-11 245 3 MA0334.1 MET32 MGCCACA 2.3e-5 1.6e-8 -17.93 0.0 114.0 494 264 795 0.23077 6.6e-11 246 3 MA0014.3 PAX5 RRGCGTGACCNN 3.0e-5 2.1e-8 -17.67 0.0 89.0 489 171 588 0.18200 8.6e-11 244 3 MA1099.1 Hes1 SVCACGYGHN 3.8e-3 2.7e-6 -12.83 0.0 103.0 491 207 687 0.20978 1.1e-8 245 3 MA1063.1 TCP19 TGGGSCCCAC 4.1e-3 2.9e-6 -12.76 0.0 237.0 491 426 725 0.48269 1.2e-8 245 3 MA0607.1 Bhlha15 SCATATGT 4.7e-3 3.3e-6 -12.61 0.0 147.0 493 135 297 0.29817 1.4e-8 246 3 MA1065.1 TCP20 GGSCCCACHN 5.3e-3 3.8e-6 -12.49 0.0 213.0 491 399 745 0.43381 1.5e-8 245 3 MA1398.1 At5g47390 HHWWYCTTATCCAHW 7.4e-3 5.3e-6 -12.16 0.0 126.0 486 147 376 0.25926 2.2e-8 242 3 MA1097.1 ARALYDRAFT_493022 GGSMCCAC 1.0e-2 7.1e-6 -11.86 0.0 133.0 493 196 514 0.26978 2.9e-8 246 3 MA0333.1 MET31 RNTGTGGCG 1.1e-2 8.1e-6 -11.72 0.0 48.0 492 78 422 0.09756 3.3e-8 245 3 MA0516.1 SP2 GYCCCGCCYCYBSSS 1.4e-2 9.8e-6 -11.53 0.0 130.0 486 222 603 0.26749 4.1e-8 242 3 MA0545.1 hlh-1 SAACAGCTGNC 1.6e-2 1.1e-5 -11.40 0.0 100.0 490 125 390 0.20408 4.6e-8 244 3 MA0948.1 ARR18 NNMNAGATACGVN 1.8e-2 1.3e-5 -11.27 0.0 188.0 488 356 737 0.38525 5.3e-8 243 3 MA0425.1 YGR067C VCCCCDCNNNNNNN 2.8e-2 2.0e-5 -10.82 0.0 109.0 487 165 506 0.22382 8.2e-8 243 3 MA0204.1 Six4 TGAYAC 4.8e-2 3.4e-5 -10.29 0.0 155.0 495 270 662 0.31313 1.4e-7 247 3 MA0753.1 ZNF740 MCCCCCCCAC 6.1e-2 4.3e-5 -10.04 0.0 93.0 491 155 553 0.18941 1.8e-7 245 3 MA1397.1 At1g74840 WWTGGATAADR 7.0e-2 4.9e-5 -9.91 0.0 116.0 490 127 355 0.23673 2.0e-7 244 3 MA0816.1 Ascl2 ARCAGCTGCY 7.1e-2 5.0e-5 -9.90 0.0 211.0 491 281 519 0.42974 2.0e-7 245 1 CCWCCCCTCCCCCTC MEME-3 CCWCCCCTCCCCCTC 7.5e-2 5.3e-5 -9.85 0.0 104.0 486 137 426 0.21399 2.2e-7 242 3 MA0531.1 CTCF CCRMYAGRTGGCGCY 8.4e-2 5.9e-5 -9.74 0.0 162.0 486 180 394 0.33333 2.4e-7 242 3 MA0298.1 FZF1 CTATCA 1.2e-1 8.7e-5 -9.35 0.0 183.0 495 378 831 0.36970 3.5e-7 247 3 MA1194.1 AT3G10580 RDWDWRGATAAGVWT 1.4e-1 9.9e-5 -9.22 0.0 202.0 486 231 432 0.41564 4.1e-7 242 3 MA0830.1 TCF4 HRCACCTGBN 1.5e-1 1.1e-4 -9.15 0.0 147.0 491 194 476 0.29939 4.3e-7 245 3 MA0688.1 TBX2 DAGGTGTGAAA 1.8e-1 1.3e-4 -8.97 0.0 168.0 490 308 712 0.34286 5.2e-7 244 3 MA1019.1 Glyma19g26560.1 GGGSCCCAC 2.1e-1 1.5e-4 -8.81 0.0 244.0 492 378 637 0.49593 6.1e-7 245 3 MA1054.1 ARALYDRAFT_897773 YKGGGACCAC 2.5e-1 1.8e-4 -8.65 0.0 131.0 491 179 487 0.26680 7.2e-7 245 3 MA0521.1 Tcf12 RACAGCTGSNV 3.4e-1 2.4e-4 -8.33 0.0 102.0 490 109 341 0.20816 9.9e-7 244 3 MA1109.1 NEUROD1 NRACAGATGGYNN 5.0e-1 3.5e-4 -7.95 0.0 154.0 488 255 630 0.31557 1.4e-6 243 3 MA0575.1 F3A4.140 NADYGACRGTTAS 7.4e-1 5.2e-4 -7.56 0.0 148.0 488 131 305 0.30328 2.1e-6 243 3 MA0002.2 RUNX1 BBYTGTGGTTT 8.8e-1 6.2e-4 -7.39 0.0 128.0 490 267 798 0.26122 2.5e-6 244 3 MA0500.1 Myog RRCAGCTGSNV 1.6e0 1.2e-3 -6.75 0.0 102.0 490 98 307 0.20816 4.8e-6 244 3 MA0121.1 ARR10 AGATHYKV 1.8e0 1.2e-3 -6.69 0.0 139.0 493 247 684 0.28195 5.1e-6 246 3 MA0029.1 Mecom AAGAYAAGATAANA 1.8e0 1.3e-3 -6.67 0.0 179.0 487 89 165 0.36756 5.2e-6 243 3 MA0691.1 TFAP4 AWCAGCTGWT 2.0e0 1.4e-3 -6.55 0.0 89.0 491 81 279 0.18126 5.8e-6 245 3 MA0522.2 TCF3 HRCACCTGBN 2.6e0 1.9e-3 -6.29 0.0 147.0 491 189 481 0.29939 7.6e-6 245 3 MA0698.1 ZBTB18 NATCCAGATGTKB 2.9e0 2.1e-3 -6.19 0.0 90.0 488 88 307 0.18443 8.5e-6 243 3 MA0513.1 SMAD2::SMAD3::SMAD4 CTGTCTGDCACCT 2.9e0 2.1e-3 -6.18 0.0 170.0 488 241 549 0.34836 8.6e-6 243 3 MA0832.1 Tcf21 RYAACAGCTGTTRN 3.0e0 2.1e-3 -6.16 0.0 95.0 487 41 109 0.19507 8.7e-6 243 3 MA1195.1 AT5G56840 AAYCTTATCCAWWWH 4.6e0 3.2e-3 -5.74 0.0 120.0 486 130 377 0.24691 1.3e-5 242 3 MA1123.1 TWIST1 NNDCCAGATGTBN 5.2e0 3.7e-3 -5.61 0.0 140.0 488 241 665 0.28689 1.5e-5 243 3 MA0499.1 Myod1 NSCAGCTGYYNYB 5.8e0 4.1e-3 -5.50 0.0 300.0 488 266 370 0.61475 1.7e-5 243 3 MA0998.1 ERF096 NMGCCGCCDN 7.5e0 5.3e-3 -5.24 0.0 231.0 491 341 615 0.47047 2.2e-5 245 3 MA1101.1 BACH2 NMTGACTCAGCANH 9.2e0 6.5e-3 -5.03 0.0 133.0 487 155 426 0.27310 2.7e-5 243 3 MA0006.1 Ahr::Arnt YGCGTG 9.8e0 6.9e-3 -4.97 0.0 149.0 495 227 600 0.30101 2.8e-5 247 # CentriMo (Local Motif Enrichment Analysis): Version 5.4.0 compiled on Aug 21 2021 at 15:31:51 # The format of this file is described at https://meme-suite.org/meme/doc/centrimo-output-format.html. # centrimo -seqlen 500 -verbosity 1 -oc memechip_example_output_files/centrimo_out -bfile memechip_example_output_files/background memechip_example_output_files/Klf1.fna memechip_example_output_files/meme_out/meme.xml memechip_example_output_files/streme_out/streme.xml JASPAR2018_CORE_non-redundant.meme