Analyzing data for sequence: ultraContig0, size: 1800, dnaOffset = 0


Loop: ultraContig0, dnaOffset=0, seqSize=1800
ultraContig0 1 1151 1 W Contig1166.22 1 1151 -
agpFrag->chromStart: 0, agpFrag->chromEnd: 1151, dnaOffset: 0
FASTA sequence entry
Valid Fasta file entry

Loop: ultraContig0, dnaOffset=1151, seqSize=1800
agpFrag->chromStart: 1151, agpFrag->chromEnd: 1615, dnaOffset: 1151
FASTA gap entry
Contains 464 Ns
Valid Fasta file entry

Loop: ultraContig0, dnaOffset=1615, seqSize=1800
ultraContig0 1616 2067 3 W Contig1166.21 1 452 -
agpFrag->chromStart: 1615, agpFrag->chromEnd: 2067, dnaOffset: 1615
agp chromEnd (2067) > seqSize (1800)
Invalid Agp or Fasta file entry for sequence ultraContig0