#hg19.snp135.chrom hg19.snp135.chromStart hg19.snp135.chromEnd hg19.snp135.name hg19.snp135.score hg19.snp135.strand hg19.snp135.refNCBI hg19.snp135.refUCSC hg19.snp135.observed hg19.snp135.molType hg19.snp135.class hg19.snp135.valid hg19.snp135.avHet hg19.snp135.avHetSE hg19.snp135.func hg19.snp135.locType hg19.snp135.weight hg19.snp135.exceptions hg19.snp135.submitterCount hg19.snp135.submitters hg19.snp135.alleleFreqCount hg19.snp135.alleles hg19.snp135.alleleNs hg19.snp135.alleleFreqs hg19.snp135.bitfields hg19.phyloP46wayPlacental.chrom hg19.phyloP46wayPlacental.chromStart hg19.phyloP46wayPlacental.chromEnd hg19.phyloP46wayPlacental.valueAverage chr1 737224 737226 rs71274724 0 + AG AG -/AG genomic deletion unknown 0.5 0 unknown range 2 MultipleAlignments 1 HUMANGENOME_JCVI, 2 -,AG, 1.000000,1.000000, 0.500000,0.500000, chr1 737224 737226 -0.450079 chr1 737225 737226 rs3991963 0 + G G -/GA genomic in-del unknown 0 0 unknown exact 2 ObservedMismatch,MultipleAlignments 1 TSC-CSHL, 0 chr1 737225 737226 -0.365323 chr1 737243 737244 rs3991964 0 + C C C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 C, 4.000000, 1.000000, chr1 737243 737244 0.595244 chr1 737268 737269 rs2427924 0 - A A G/T genomic single by-cluster 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 6 BCM-HGSC-SUB,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,SC_JCM,TSC-CSHL, 1 T, 4.000000, 1.000000, chr1 737268 737269 0.369228 chr1 737327 737328 rs3991966 0 + C C C/G genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 C, 2.000000, 1.000000, chr1 737327 737328 -0.280567 chr1 737336 737337 rs3991967 0 + A A A/G genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 A, 2.000000, 1.000000, chr1 737336 737337 -0.760850 chr1 737357 737358 rs3991968 0 + A A A/G genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 A, 4.000000, 1.000000, chr1 737357 737358 -0.760850 chr1 737371 737372 rs3991969 0 + C C C/G genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 C, 4.000000, 1.000000, chr1 737371 737372 0.453984 chr1 737372 737373 rs3991970 0 + T T C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 T, 4.000000, 1.000000, chr1 737372 737373 -2.145197 chr1 737373 737374 rs3991937 0 + G G A/G genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 G, 4.000000, 1.000000, chr1 737373 737374 -1.975685 chr1 737381 737382 rs3991938 0 + T T C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 T, 2.000000, 1.000000, chr1 737381 737382 -0.704346 chr1 737401 737406 rs3991939 0 + ATAAG ATAAG -/ATAAG genomic deletion unknown 0 0 unknown range 2 MultipleAlignments 1 TSC-CSHL, 0 chr1 737401 737406 0.267521 chr1 737406 737407 rs3991940 0 + T T A/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 T, 2.000000, 1.000000, chr1 737406 737407 -0.506583 chr1 737423 737424 rs3991941 0 + T T C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 T, 2.000000, 1.000000, chr1 737423 737424 -0.506583 chr1 737435 737436 rs3991942 0 + T T C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 T, 4.000000, 1.000000, chr1 737435 737436 0.397480 chr1 737493 737494 rs3991943 0 + C C C/G genomic single by-cluster 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 2 BCM-HGSC-SUB,TSC-CSHL, 1 C, 2.000000, 1.000000, chr1 737493 737494 0.453984 chr1 737556 737557 rs3991944 0 + A A A/G genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 A, 4.000000, 1.000000, chr1 737556 737557 -1.608409 chr1 737576 737577 rs3991945 0 + C C C/G genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 C, 4.000000, 1.000000, chr1 737576 737577 0.453984 chr1 737600 737601 rs3991946 0 + A A A/G genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 A, 4.000000, 1.000000, chr1 737600 737601 -1.608409 chr1 737618 737619 rs3991947 0 + T T C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments,SingleAlleleFreq 1 TSC-CSHL, 1 T, 4.000000, 1.000000, chr1 737618 737619 -0.732598 chr1 737642 737643 rs2427923 0 - G G C/T genomic single by-cluster 0.5 0 unknown exact 2 MultipleAlignments 3 HUMANGENOME_JCVI,SC_JCM,TSC-CSHL, 2 C,T, 1.000000,1.000000, 0.500000,0.500000, chr1 737642 737643 -0.647843 chr1 737739 737740 rs3893479 0 - G G C/T genomic single by-cluster 0.375 0.216506 unknown exact 2 MultipleAlignments 4 ENSEMBL,GMI,SC_JCM,TSC-CSHL, 2 C,T, 1.000000,3.000000, 0.250000,0.750000, chr1 737739 737740 0.453984 chr1 737808 737809 rs75779483 0 + G G A/G genomic single by-frequency 0.5 0 unknown exact 2 MultipleAlignments 1 ENSEMBL, 2 A,G, 2.000000,2.000000, 0.500000,0.500000, chr1 737808 737809 -0.463512 chr1 737875 737875 rs3991950 0 + - - -/TACT genomic insertion unknown 0 0 unknown between 2 MultipleAlignments 1 TSC-CSHL, 0 chr1 737909 737910 rs2427921 0 - G G C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments 1 SC_JCM, 0 chr1 737909 737910 0.469968 chr1 737950 737951 rs4298675 0 + C C C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments 1 SC_JCM, 0 chr1 737950 737951 0.469968 chr1 738123 738124 rs2427920 0 - G G C/T genomic single by-cluster 0.5 0 unknown exact 2 MultipleAlignments 2 HUMANGENOME_JCVI,SC_JCM, 2 C,T, 1.000000,1.000000, 0.500000,0.500000, chr1 738123 738124 0.469968 chr1 738152 738153 rs2488518 0 - T T A/G genomic single by-cluster,by-hapmap 0.5 0 unknown exact 2 MultipleAlignments 5 BCMHGSC_JDW,CSHL-HAPMAP,HUMANGENOME_JCVI,SC_JCM,SSAHASNP, 2 A,G, 1.000000,1.000000, 0.500000,0.500000, chr1 738152 738153 0.369953 chr1 738184 738185 rs2488517 0 - T T A/G genomic single by-cluster 0.5 0 unknown exact 2 MultipleAlignments 2 HUMANGENOME_JCVI,SC_JCM, 2 A,G, 1.000000,1.000000, 0.500000,0.500000, chr1 738184 738185 0.136583 chr1 738213 738214 rs12184296 0 + C C C/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments 2 SC_SNP,SSAHASNP, 0 chr1 738213 738214 -1.497008 chr1 738213 738214 rs145807359 0 + C C C/T genomic single by-1000genomes 0 0 unknown exact 1 1 1000GENOMES, 0 chr1 738213 738214 -1.497008 chr1 738221 738222 rs12565530 0 + C C C/G genomic single by-cluster,by-hapmap 0 0 unknown exact 2 MultipleAlignments 2 CSHL-HAPMAP,SSAHASNP, 0 chr1 738221 738222 0.169921 chr1 738222 738223 rs138388092 0 + T T C/T genomic single by-1000genomes 0 0 unknown exact 1 1 1000GENOMES, 0 chr1 738222 738223 0.136583 chr1 738409 738410 rs183240359 0 + C C C/T genomic single by-1000genomes 0 0 unknown exact 1 1 1000GENOMES, 0 chr1 738409 738410 -0.196803 chr1 738462 738463 rs149233195 0 + T T C/T genomic single by-1000genomes 0 0 unknown exact 1 1 1000GENOMES, 0 chr1 738462 738463 0.536646 chr1 738466 738467 rs2488926 0 - C C G/T genomic single unknown 0 0 unknown exact 2 MultipleAlignments 1 SC_JCM, 0 chr1 738466 738467 -1.497008 chr1 738466 738475 rs71208364 0 - CGTTTAAAG CGTTTAAAG CTTTAAACG/TTTTAAACT genomic mnp unknown 0.5 0 unknown range 2 MultipleAlignments 1 HUMANGENOME_JCVI, 2 CTTTAAACG,TTTTAAACT, 1.000000,1.000000, 0.500000,0.500000, chr1 738466 738475 0.236598 chr1 738474 738475 rs2427919 0 - G G C/T genomic single by-submitter 0 0 unknown exact 2 MultipleAlignments 1 SC_JCM, 0 chr1 738474 738475 -0.263480