About
======

Please cite deepTools as follows:

    Ramírez, Fidel, Devon P. Ryan, Björn Grüning, Vivek Bhardwaj, Fabian Kilpert,
    Andreas S. Richter, Steffen Heyne, Friederike Dündar,
    and Thomas Manke. `deepTools2: A next Generation Web Server for Deep-Sequencing Data Analysis <http://nar.oxfordjournals.org/content/early/2016/04/12/nar.gkw257.abstract>`_.
    Nucleic Acids Research (2016). `doi:10.1093/nar/gkw257 <http://doi.org/10.1093/nar/gkw257>`_.

Where deepTools are used:

* DEEP consortium
* public Galaxy server hosted at `<https://usegalaxy.org/>`_.
* public Galaxy instance hosted by the Max-Planck-Institute for Immunobiology and Epigenetics: deeptools.ie-freiburg.mpg.de
* in-house Galaxy instance of the Max-Planck-Institute for Immunobiology and Epigenetics
* Galaxy instance of the University of Freiburg, Germany
* Galaxy instance of the ICGMB, Strasbourg, France
* Galaxy instance of LCSB and HPC @ Uni.lu, Belval, Luxembourg

.. image:: ../images/logo_mpi-ie.jpg

This tool suite is developed by the `Bioinformatics Facility <http://www1.ie-freiburg.mpg.de/bioinformaticsfac>`_ at the
`Max Planck Institute for Immunobiology and Epigenetics,
Freiburg <http://www1.ie-freiburg.mpg.de/>`_.