#include <alignment/format/CompareSequencesPrinter.hpp>

void CompareSequencesOutput::PrintHeader(std::ostream &out)
{
    out << "qName qLength qStart qEnd qStrand "
        << "tName tLength tStart tEnd tStrand "
        << "score numMatch numMismatch numIns numDel "
        << "mapQV qAlignedSeq matchPattern tAlignedSeq" << std::endl;
}