Index of /kundaje/marinovg/oak/papers/2026_Chromera_Hi-C/2026-01-16-Ultima-run-Chromera/juicer-L1273+L4897-Chromera_velia-Hi-C-3D-r50

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]CDMZ01.0.asm2026-05-07 22:14 31K 
[ ]CDMZ01.0.assembly2026-05-07 22:18 284K 
[ ]CDMZ01.0.cprops2026-05-07 20:24 247K 
[ ]CDMZ01.0.hic2026-05-07 23:01 320M 
[TXT]CDMZ01.0_asm.scaffold_track.txt2026-05-07 22:18 827K 
[TXT]CDMZ01.0_asm.superscaf_track.txt2026-05-07 22:18 15K 
[ ]CDMZ01.1.asm2026-05-08 00:34 32K 
[ ]CDMZ01.1.assembly2026-05-08 00:39 302K 
[ ]CDMZ01.1.cprops2026-05-07 23:06 264K 
[ ]CDMZ01.1.hic2026-05-08 01:27 320M 
[TXT]CDMZ01.1_asm.scaffold_track.txt2026-05-08 00:39 869K 
[TXT]CDMZ01.1_asm.superscaf_track.txt2026-05-08 00:39 41K 
[ ]CDMZ01.2.asm2026-05-08 02:50 32K 
[ ]CDMZ01.2.assembly2026-05-08 02:54 306K 
[ ]CDMZ01.2.cprops2026-05-08 01:32 268K 
[ ]CDMZ01.2.hic2026-05-08 03:54 320M 
[TXT]CDMZ01.2_asm.scaffold_track.txt2026-05-08 02:54 878K 
[TXT]CDMZ01.2_asm.superscaf_track.txt2026-05-08 02:54 47K 
[ ]CDMZ01.3.asm2026-05-08 05:27 32K 
[ ]CDMZ01.3.assembly2026-05-08 05:31 308K 
[ ]CDMZ01.3.cprops2026-05-08 03:59 270K 
[ ]CDMZ01.3.hic2026-05-08 06:24 320M 
[TXT]CDMZ01.3_asm.scaffold_track.txt2026-05-08 05:31 882K 
[TXT]CDMZ01.3_asm.superscaf_track.txt2026-05-08 05:31 50K 
[ ]CDMZ01.4.asm2026-05-08 08:03 32K 
[ ]CDMZ01.4.assembly2026-05-08 08:07 309K 
[ ]CDMZ01.4.cprops2026-05-08 06:30 270K 
[ ]CDMZ01.4.hic2026-05-08 09:04 320M 
[TXT]CDMZ01.4_asm.scaffold_track.txt2026-05-08 08:07 883K 
[TXT]CDMZ01.4_asm.superscaf_track.txt2026-05-08 08:07 51K 
[ ]CDMZ01.5.asm2026-05-08 10:32 32K 
[ ]CDMZ01.5.assembly2026-05-08 10:36 309K 
[ ]CDMZ01.5.cprops2026-05-08 09:10 270K 
[ ]CDMZ01.5.hic2026-05-08 11:28 320M 
[TXT]CDMZ01.5_asm.scaffold_track.txt2026-05-08 10:36 884K 
[TXT]CDMZ01.5_asm.superscaf_track.txt2026-05-08 10:36 51K 
[ ]CDMZ01.6.asm2026-05-08 13:01 32K 
[ ]CDMZ01.6.assembly2026-05-08 13:06 309K 
[ ]CDMZ01.6.cprops2026-05-08 11:33 271K 
[ ]CDMZ01.6.hic2026-05-08 13:52 320M 
[TXT]CDMZ01.6_asm.scaffold_track.txt2026-05-08 13:06 885K 
[TXT]CDMZ01.6_asm.superscaf_track.txt2026-05-08 13:06 52K 
[ ]CDMZ01.7.asm2026-05-08 15:11 32K 
[ ]CDMZ01.7.assembly2026-05-08 15:16 310K 
[ ]CDMZ01.7.cprops2026-05-08 13:57 271K 
[ ]CDMZ01.7.hic2026-05-08 16:09 320M 
[TXT]CDMZ01.7_asm.scaffold_track.txt2026-05-08 15:16 886K 
[TXT]CDMZ01.7_asm.superscaf_track.txt2026-05-08 15:16 52K 
[ ]CDMZ01.8.asm2026-05-08 17:29 32K 
[ ]CDMZ01.8.assembly2026-05-08 17:33 310K 
[ ]CDMZ01.8.cprops2026-05-08 16:14 271K 
[ ]CDMZ01.8.hic2026-05-08 18:27 320M 
[TXT]CDMZ01.8_asm.scaffold_track.txt2026-05-08 17:33 886K 
[TXT]CDMZ01.8_asm.superscaf_track.txt2026-05-08 17:33 53K 
[ ]CDMZ01.9.asm2026-05-08 19:51 32K 
[ ]CDMZ01.9.assembly2026-05-08 19:57 310K 
[ ]CDMZ01.9.cprops2026-05-08 18:32 271K 
[ ]CDMZ01.9.hic2026-05-08 21:09 320M 
[TXT]CDMZ01.9_asm.scaffold_track.txt2026-05-08 19:57 887K 
[TXT]CDMZ01.9_asm.superscaf_track.txt2026-05-08 19:57 53K 
[ ]CDMZ01.10.asm2026-05-08 22:50 32K 
[ ]CDMZ01.10.assembly2026-05-08 22:56 310K 
[ ]CDMZ01.10.cprops2026-05-08 21:16 272K 
[ ]CDMZ01.10.hic2026-05-09 00:06 320M 
[TXT]CDMZ01.10_asm.scaffold_track.txt2026-05-08 22:56 887K 
[TXT]CDMZ01.10_asm.superscaf_track.txt2026-05-08 22:56 53K 
[ ]CDMZ01.11.asm2026-05-09 01:47 32K 
[ ]CDMZ01.11.assembly2026-05-09 01:53 310K 
[ ]CDMZ01.11.cprops2026-05-09 00:14 272K 
[ ]CDMZ01.11.hic2026-05-09 03:06 320M 
[TXT]CDMZ01.11_asm.scaffold_track.txt2026-05-09 01:53 887K 
[TXT]CDMZ01.11_asm.superscaf_track.txt2026-05-09 01:53 53K 
[ ]CDMZ01.12.asm2026-05-09 04:25 32K 
[ ]CDMZ01.12.assembly2026-05-09 04:27 310K 
[ ]CDMZ01.12.cprops2026-05-09 03:13 272K 
[ ]CDMZ01.12.hic2026-05-09 05:05 320M 
[TXT]CDMZ01.12_asm.scaffold_track.txt2026-05-09 04:27 887K 
[TXT]CDMZ01.12_asm.superscaf_track.txt2026-05-09 04:27 53K 
[ ]CDMZ01.13.asm2026-05-09 06:03 32K 
[ ]CDMZ01.13.assembly2026-05-09 06:07 310K 
[ ]CDMZ01.13.cprops2026-05-09 05:08 272K 
[ ]CDMZ01.13.hic2026-05-09 07:01 320M 
[TXT]CDMZ01.13_asm.scaffold_track.txt2026-05-09 06:07 887K 
[TXT]CDMZ01.13_asm.superscaf_track.txt2026-05-09 06:07 53K 
[ ]CDMZ01.14.asm2026-05-09 08:28 32K 
[ ]CDMZ01.14.assembly2026-05-09 08:33 310K 
[ ]CDMZ01.14.cprops2026-05-09 07:07 272K 
[ ]CDMZ01.14.hic2026-05-09 09:42 320M 
[TXT]CDMZ01.14_asm.scaffold_track.txt2026-05-09 08:33 887K 
[TXT]CDMZ01.14_asm.superscaf_track.txt2026-05-09 08:33 54K 
[ ]CDMZ01.15.asm2026-05-09 11:11 32K 
[ ]CDMZ01.15.assembly2026-05-09 11:16 310K 
[ ]CDMZ01.15.cprops2026-05-09 09:49 272K 
[ ]CDMZ01.15.hic2026-05-09 12:22 320M 
[TXT]CDMZ01.15_asm.scaffold_track.txt2026-05-09 11:16 888K 
[TXT]CDMZ01.15_asm.superscaf_track.txt2026-05-09 11:16 54K 
[ ]CDMZ01.16.asm2026-05-09 13:50 32K 
[ ]CDMZ01.16.assembly2026-05-09 13:56 311K 
[ ]CDMZ01.16.cprops2026-05-09 12:28 272K 
[ ]CDMZ01.16.hic2026-05-09 15:05 320M 
[TXT]CDMZ01.16_asm.scaffold_track.txt2026-05-09 13:56 888K 
[TXT]CDMZ01.16_asm.superscaf_track.txt2026-05-09 13:56 54K 
[ ]CDMZ01.17.asm2026-05-09 16:30 32K 
[ ]CDMZ01.17.assembly2026-05-09 16:35 311K 
[ ]CDMZ01.17.cprops2026-05-09 15:11 272K 
[ ]CDMZ01.17.hic2026-05-09 17:39 320M 
[TXT]CDMZ01.17_asm.scaffold_track.txt2026-05-09 16:35 888K 
[TXT]CDMZ01.17_asm.superscaf_track.txt2026-05-09 16:35 54K 
[ ]CDMZ01.18.asm2026-05-09 18:53 32K 
[ ]CDMZ01.18.assembly2026-05-09 18:58 311K 
[ ]CDMZ01.18.cprops2026-05-09 17:45 272K 
[ ]CDMZ01.18.hic2026-05-09 19:57 320M 
[TXT]CDMZ01.18_asm.scaffold_track.txt2026-05-09 18:58 888K 
[TXT]CDMZ01.18_asm.superscaf_track.txt2026-05-09 18:58 54K 
[ ]CDMZ01.19.asm2026-05-09 21:14 32K 
[ ]CDMZ01.19.assembly2026-05-09 21:19 311K 
[ ]CDMZ01.19.cprops2026-05-09 20:03 272K 
[ ]CDMZ01.19.hic2026-05-09 22:23 320M 
[TXT]CDMZ01.19_asm.scaffold_track.txt2026-05-09 21:19 888K 
[TXT]CDMZ01.19_asm.superscaf_track.txt2026-05-09 21:19 54K 
[ ]CDMZ01.FINAL.assembly2026-05-10 01:40 335K 
[ ]CDMZ01.FINAL.fasta2026-05-10 01:40 190M 
[ ]CDMZ01.FINAL.hic2026-05-10 02:49 322M 
[TXT]CDMZ01.FINAL_asm.scaffold_track.txt2026-05-10 01:54 879K 
[TXT]CDMZ01.FINAL_asm.superscaf_track.txt2026-05-10 01:54 48K 
[ ]CDMZ01.cprops2026-05-07 20:24 247K 
[TXT]CDMZ01.edits.txt2026-05-09 20:03 39K 
[ ]CDMZ01.final.asm2026-05-10 00:27 32K 
[ ]CDMZ01.final.assembly2026-05-10 00:43 307K 
[ ]CDMZ01.final.cprops2026-05-10 00:27 268K 
[ ]CDMZ01.final.fasta2026-05-10 01:37 187M 
[ ]CDMZ01.final.hic2026-05-10 01:36 320M 
[TXT]CDMZ01.mnd.txt2026-02-04 17:13 169G 
[ ]CDMZ01.polished.asm2026-05-09 22:52 33K 
[ ]CDMZ01.polished.cprops2026-05-09 22:37 272K 
[ ]CDMZ01.polished.depletion_score_narrow.wig2026-05-09 22:37 2.7M 
[ ]CDMZ01.polished.depletion_score_wide.wig2026-05-09 22:29 32K 
[TXT]CDMZ01.polished.edits_2D.txt2026-05-09 22:37 162  
[ ]CDMZ01.polished.hic2026-05-09 23:30 320M 
[ ]CDMZ01.polished.mismatch_narrow.bed2026-05-09 22:37 112  
[ ]CDMZ01.polished.mismatch_wide.bed2026-05-09 22:29 112  
[TXT]CDMZ01.polished.mismatches_2D.txt2026-05-09 22:37 705  
[ ]CDMZ01.polished.split.assembly2026-05-09 23:49 311K 
[ ]CDMZ01.polished.split.depletion_score_narrow.wig2026-05-09 23:35 2.7M 
[ ]CDMZ01.polished.split.depletion_score_wide.wig2026-05-09 23:31 32K 
[TXT]CDMZ01.polished.split.edits_2D.txt2026-05-09 23:35 47  
[ ]CDMZ01.polished.split.mismatch_narrow.bed2026-05-09 23:35 110  
[ ]CDMZ01.polished.split.mismatch_wide.bed2026-05-09 23:31 110  
[TXT]CDMZ01.polished.split.mismatches_2D.txt2026-05-09 23:35 919  
[TXT]CDMZ01.polished.split.suspicious_2D.txt2026-05-09 23:35 919  
[TXT]CDMZ01.polished.suspect_2D.txt2026-05-09 22:37 820  
[TXT]CDMZ01.polished_asm.scaffold_track.txt2026-05-09 22:55 888K 
[TXT]CDMZ01.polished_asm.superscaf_track.txt2026-05-09 22:55 54K 
[ ]CDMZ01.rawchrom.asm2026-05-10 00:27 32K 
[ ]CDMZ01.rawchrom.assembly2026-05-10 00:43 307K 
[ ]CDMZ01.rawchrom.cprops2026-05-10 00:27 268K 
[ ]CDMZ01.rawchrom.fasta2026-05-10 01:37 187M 
[ ]CDMZ01.rawchrom.hic2026-05-10 01:36 320M 
[TXT]CDMZ01.rawchrom_asm.scaffold_track.txt2026-05-10 00:43 878K 
[TXT]CDMZ01.rawchrom_asm.superscaf_track.txt2026-05-10 00:43 48K 
[ ]CDMZ01.resolved.asm2026-05-09 21:14 32K 
[ ]CDMZ01.resolved.cprops2026-05-09 20:03 272K 
[ ]CDMZ01.resolved.hic2026-05-09 22:23 320M 
[ ]CDMZ01.resolved.polish.assembly2026-05-09 22:55 311K 
[TXT]CDMZ01.resolved_asm.scaffold_track.txt2026-05-09 21:19 888K 
[TXT]CDMZ01.resolved_asm.superscaf_track.txt2026-05-09 21:19 54K 
[ ]CDMZ01.split.asm2026-05-09 23:46 33K 
[ ]CDMZ01.split.assembly2026-05-10 00:27 311K 
[ ]CDMZ01.split.cprops2026-05-09 23:35 272K 
[ ]CDMZ01.split.hic2026-05-10 00:27 320M 
[TXT]CDMZ01.split_asm.scaffold_track.txt2026-05-09 23:49 888K 
[TXT]CDMZ01.split_asm.superscaf_track.txt2026-05-09 23:49 55K 
[ ]LICENSE2026-05-07 03:20 1.0K 
[TXT]README.md2026-05-07 03:20 8.7K 
[TXT]archive.CDMZ01.edits.at.step.1.txt2026-05-08 01:32 27K 
[TXT]archive.CDMZ01.edits.at.step.2.txt2026-05-08 03:59 32K 
[TXT]archive.CDMZ01.edits.at.step.3.txt2026-05-08 06:30 35K 
[TXT]archive.CDMZ01.edits.at.step.4.txt2026-05-08 09:10 36K 
[TXT]archive.CDMZ01.edits.at.step.5.txt2026-05-08 11:33 36K 
[TXT]archive.CDMZ01.edits.at.step.6.txt2026-05-08 13:57 37K 
[TXT]archive.CDMZ01.edits.at.step.7.txt2026-05-08 16:14 37K 
[TXT]archive.CDMZ01.edits.at.step.8.txt2026-05-08 18:32 37K 
[TXT]archive.CDMZ01.edits.at.step.9.txt2026-05-08 21:16 37K 
[TXT]archive.CDMZ01.edits.at.step.10.txt2026-05-09 00:14 38K 
[TXT]archive.CDMZ01.edits.at.step.11.txt2026-05-09 03:13 38K 
[TXT]archive.CDMZ01.edits.at.step.12.txt2026-05-09 05:08 38K 
[TXT]archive.CDMZ01.edits.at.step.13.txt2026-05-09 07:07 38K 
[TXT]archive.CDMZ01.edits.at.step.14.txt2026-05-09 09:49 38K 
[TXT]archive.CDMZ01.edits.at.step.15.txt2026-05-09 12:28 38K 
[TXT]archive.CDMZ01.edits.at.step.16.txt2026-05-09 15:11 38K 
[TXT]archive.CDMZ01.edits.at.step.17.txt2026-05-09 17:45 38K 
[TXT]archive.CDMZ01.edits.at.step.18.txt2026-05-09 20:03 38K 
[ ]coverage_wide.at.step.0.wig2026-05-07 23:06 142K 
[ ]coverage_wide.at.step.1.wig2026-05-08 01:32 142K 
[ ]coverage_wide.at.step.2.wig2026-05-08 03:59 142K 
[ ]coverage_wide.at.step.3.wig2026-05-08 06:30 142K 
[ ]coverage_wide.at.step.4.wig2026-05-08 09:10 142K 
[ ]coverage_wide.at.step.5.wig2026-05-08 11:33 142K 
[ ]coverage_wide.at.step.6.wig2026-05-08 13:57 142K 
[ ]coverage_wide.at.step.7.wig2026-05-08 16:14 142K 
[ ]coverage_wide.at.step.8.wig2026-05-08 18:32 142K 
[ ]coverage_wide.at.step.9.wig2026-05-08 21:16 142K 
[ ]coverage_wide.at.step.10.wig2026-05-09 00:14 142K 
[ ]coverage_wide.at.step.11.wig2026-05-09 03:13 142K 
[ ]coverage_wide.at.step.12.wig2026-05-09 05:08 142K 
[ ]coverage_wide.at.step.13.wig2026-05-09 07:07 142K 
[ ]coverage_wide.at.step.14.wig2026-05-09 09:49 142K 
[ ]coverage_wide.at.step.15.wig2026-05-09 12:28 142K 
[ ]coverage_wide.at.step.16.wig2026-05-09 15:11 142K 
[ ]coverage_wide.at.step.17.wig2026-05-09 17:45 142K 
[ ]coverage_wide.at.step.18.wig2026-05-09 20:03 142K 
[ ]coverage_wide.at.step.19.wig2026-05-09 22:29 142K 
[DIR]data/2026-05-07 03:20 -  
[ ]depletion_score_narrow.at.step.0.wig2026-05-07 23:06 2.5M 
[ ]depletion_score_narrow.at.step.1.wig2026-05-08 01:32 2.5M 
[ ]depletion_score_narrow.at.step.2.wig2026-05-08 03:59 2.5M 
[ ]depletion_score_narrow.at.step.3.wig2026-05-08 06:30 2.5M 
[ ]depletion_score_narrow.at.step.4.wig2026-05-08 09:10 2.5M 
[ ]depletion_score_narrow.at.step.5.wig2026-05-08 11:33 2.5M 
[ ]depletion_score_narrow.at.step.6.wig2026-05-08 13:57 2.5M 
[ ]depletion_score_narrow.at.step.7.wig2026-05-08 16:14 2.5M 
[ ]depletion_score_narrow.at.step.8.wig2026-05-08 18:32 2.5M 
[ ]depletion_score_narrow.at.step.9.wig2026-05-08 21:16 2.5M 
[ ]depletion_score_narrow.at.step.10.wig2026-05-09 00:14 2.5M 
[ ]depletion_score_narrow.at.step.11.wig2026-05-09 03:13 2.5M 
[ ]depletion_score_narrow.at.step.12.wig2026-05-09 05:08 2.5M 
[ ]depletion_score_narrow.at.step.13.wig2026-05-09 07:07 2.5M 
[ ]depletion_score_narrow.at.step.14.wig2026-05-09 09:49 2.5M 
[ ]depletion_score_narrow.at.step.15.wig2026-05-09 12:28 2.5M 
[ ]depletion_score_narrow.at.step.16.wig2026-05-09 15:11 2.5M 
[ ]depletion_score_narrow.at.step.17.wig2026-05-09 17:45 2.5M 
[ ]depletion_score_narrow.at.step.18.wig2026-05-09 20:03 2.5M 
[ ]depletion_score_narrow.at.step.19.wig2026-05-09 22:29 2.5M 
[ ]depletion_score_wide.at.step.0.wig2026-05-07 23:03 132K 
[ ]depletion_score_wide.at.step.1.wig2026-05-08 01:28 132K 
[ ]depletion_score_wide.at.step.2.wig2026-05-08 03:55 132K 
[ ]depletion_score_wide.at.step.3.wig2026-05-08 06:26 124K 
[ ]depletion_score_wide.at.step.4.wig2026-05-08 09:06 132K 
[ ]depletion_score_wide.at.step.5.wig2026-05-08 11:30 117K 
[ ]depletion_score_wide.at.step.6.wig2026-05-08 13:53 132K 
[ ]depletion_score_wide.at.step.7.wig2026-05-08 16:10 132K 
[ ]depletion_score_wide.at.step.8.wig2026-05-08 18:29 132K 
[ ]depletion_score_wide.at.step.9.wig2026-05-08 21:11 132K 
[ ]depletion_score_wide.at.step.10.wig2026-05-09 00:08 132K 
[ ]depletion_score_wide.at.step.11.wig2026-05-09 03:07 132K 
[ ]depletion_score_wide.at.step.12.wig2026-05-09 05:06 132K 
[ ]depletion_score_wide.at.step.13.wig2026-05-09 07:02 132K 
[ ]depletion_score_wide.at.step.14.wig2026-05-09 09:44 132K 
[ ]depletion_score_wide.at.step.15.wig2026-05-09 12:23 132K 
[ ]depletion_score_wide.at.step.16.wig2026-05-09 15:06 132K 
[ ]depletion_score_wide.at.step.17.wig2026-05-09 17:41 132K 
[ ]depletion_score_wide.at.step.18.wig2026-05-09 19:58 132K 
[ ]depletion_score_wide.at.step.19.wig2026-05-09 22:24 132K 
[DIR]edit/2026-05-07 03:20 -  
[TXT]edits.for.step.1.txt2026-05-07 23:06 25K 
[TXT]edits.for.step.2.txt2026-05-08 01:32 6.2K 
[TXT]edits.for.step.3.txt2026-05-08 03:59 2.7K 
[TXT]edits.for.step.4.txt2026-05-08 06:30 1.3K 
[TXT]edits.for.step.5.txt2026-05-08 09:10 269  
[TXT]edits.for.step.6.txt2026-05-08 11:33 384  
[TXT]edits.for.step.7.txt2026-05-08 13:57 261  
[TXT]edits.for.step.8.txt2026-05-08 16:14 269  
[TXT]edits.for.step.9.txt2026-05-08 18:32 269  
[TXT]edits.for.step.10.txt2026-05-08 21:16 269  
[TXT]edits.for.step.11.txt2026-05-09 00:14 154  
[TXT]edits.for.step.12.txt2026-05-09 03:13 154  
[TXT]edits.for.step.13.txt2026-05-09 05:08 154  
[TXT]edits.for.step.14.txt2026-05-09 07:07 154  
[TXT]edits.for.step.15.txt2026-05-09 09:49 154  
[TXT]edits.for.step.16.txt2026-05-09 12:28 154  
[TXT]edits.for.step.17.txt2026-05-09 15:11 154  
[TXT]edits.for.step.18.txt2026-05-09 17:45 154  
[TXT]edits.for.step.19.txt2026-05-09 20:03 154  
[DIR]finalize/2026-05-07 03:20 -  
[TXT]h.edits.txt2026-05-09 23:35 47  
[DIR]lift/2026-05-07 03:20 -  
[DIR]merge/2026-05-07 03:20 -  
[ ]mismatch_narrow.at.step.0.bed2026-05-07 23:06 3.9K 
[ ]mismatch_narrow.at.step.1.bed2026-05-08 01:32 1.3K 
[ ]mismatch_narrow.at.step.2.bed2026-05-08 03:59 1.1K 
[ ]mismatch_narrow.at.step.3.bed2026-05-08 06:30 949  
[ ]mismatch_narrow.at.step.4.bed2026-05-08 09:10 908  
[ ]mismatch_narrow.at.step.5.bed2026-05-08 11:33 920  
[ ]mismatch_narrow.at.step.6.bed2026-05-08 13:57 914  
[ ]mismatch_narrow.at.step.7.bed2026-05-08 16:14 833  
[ ]mismatch_narrow.at.step.8.bed2026-05-08 18:32 804  
[ ]mismatch_narrow.at.step.9.bed2026-05-08 21:16 746  
[ ]mismatch_narrow.at.step.10.bed2026-05-09 00:14 804  
[ ]mismatch_narrow.at.step.11.bed2026-05-09 03:13 833  
[ ]mismatch_narrow.at.step.12.bed2026-05-09 05:08 833  
[ ]mismatch_narrow.at.step.13.bed2026-05-09 07:07 862  
[ ]mismatch_narrow.at.step.14.bed2026-05-09 09:49 804  
[ ]mismatch_narrow.at.step.15.bed2026-05-09 12:28 862  
[ ]mismatch_narrow.at.step.16.bed2026-05-09 15:11 862  
[ ]mismatch_narrow.at.step.17.bed2026-05-09 17:45 862  
[ ]mismatch_narrow.at.step.18.bed2026-05-09 20:03 833  
[ ]mismatch_narrow.at.step.19.bed2026-05-09 22:29 862  
[ ]mismatch_wide.at.step.0.bed2026-05-07 23:03 3.6K 
[ ]mismatch_wide.at.step.1.bed2026-05-08 01:28 1.1K 
[ ]mismatch_wide.at.step.2.bed2026-05-08 03:55 904  
[ ]mismatch_wide.at.step.3.bed2026-05-08 06:26 514  
[ ]mismatch_wide.at.step.4.bed2026-05-08 09:06 589  
[ ]mismatch_wide.at.step.5.bed2026-05-08 11:30 572  
[ ]mismatch_wide.at.step.6.bed2026-05-08 13:53 508  
[ ]mismatch_wide.at.step.7.bed2026-05-08 16:10 427  
[ ]mismatch_wide.at.step.8.bed2026-05-08 18:29 456  
[ ]mismatch_wide.at.step.9.bed2026-05-08 21:11 427  
[ ]mismatch_wide.at.step.10.bed2026-05-09 00:08 456  
[ ]mismatch_wide.at.step.11.bed2026-05-09 03:07 485  
[ ]mismatch_wide.at.step.12.bed2026-05-09 05:06 514  
[ ]mismatch_wide.at.step.13.bed2026-05-09 07:02 543  
[ ]mismatch_wide.at.step.14.bed2026-05-09 09:44 485  
[ ]mismatch_wide.at.step.15.bed2026-05-09 12:23 485  
[ ]mismatch_wide.at.step.16.bed2026-05-09 15:06 485  
[ ]mismatch_wide.at.step.17.bed2026-05-09 17:41 485  
[ ]mismatch_wide.at.step.18.bed2026-05-09 19:58 485  
[ ]mismatch_wide.at.step.19.bed2026-05-09 22:24 514  
[TXT]mismatches.at.step.0.txt2026-05-07 23:06 12K 
[TXT]mismatches.at.step.1.txt2026-05-08 01:32 3.6K 
[TXT]mismatches.at.step.2.txt2026-05-08 03:59 3.5K 
[TXT]mismatches.at.step.3.txt2026-05-08 06:30 2.3K 
[TXT]mismatches.at.step.4.txt2026-05-08 09:10 2.4K 
[TXT]mismatches.at.step.5.txt2026-05-08 11:33 2.5K 
[TXT]mismatches.at.step.6.txt2026-05-08 13:57 2.3K 
[TXT]mismatches.at.step.7.txt2026-05-08 16:14 1.9K 
[TXT]mismatches.at.step.8.txt2026-05-08 18:32 1.8K 
[TXT]mismatches.at.step.9.txt2026-05-08 21:16 1.8K 
[TXT]mismatches.at.step.10.txt2026-05-09 00:14 1.9K 
[TXT]mismatches.at.step.11.txt2026-05-09 03:13 1.9K 
[TXT]mismatches.at.step.12.txt2026-05-09 05:08 1.9K 
[TXT]mismatches.at.step.13.txt2026-05-09 07:07 1.9K 
[TXT]mismatches.at.step.14.txt2026-05-09 09:49 1.9K 
[TXT]mismatches.at.step.15.txt2026-05-09 12:28 1.9K 
[TXT]mismatches.at.step.16.txt2026-05-09 15:11 1.9K 
[TXT]mismatches.at.step.17.txt2026-05-09 17:45 1.9K 
[TXT]mismatches.at.step.18.txt2026-05-09 20:03 1.9K 
[TXT]mismatches.at.step.19.txt2026-05-09 22:29 2.3K 
[DIR]polish/2026-05-07 03:20 -  
[ ]repeats_wide.at.step.0.bed2026-05-07 23:06 1.0K 
[ ]repeats_wide.at.step.1.bed2026-05-08 01:32 624  
[ ]repeats_wide.at.step.2.bed2026-05-08 03:59 574  
[ ]repeats_wide.at.step.3.bed2026-05-08 06:30 580  
[ ]repeats_wide.at.step.4.bed2026-05-08 09:10 638  
[ ]repeats_wide.at.step.5.bed2026-05-08 11:33 522  
[ ]repeats_wide.at.step.6.bed2026-05-08 13:57 609  
[ ]repeats_wide.at.step.7.bed2026-05-08 16:14 580  
[ ]repeats_wide.at.step.8.bed2026-05-08 18:32 522  
[ ]repeats_wide.at.step.9.bed2026-05-08 21:16 551  
[ ]repeats_wide.at.step.10.bed2026-05-09 00:14 522  
[ ]repeats_wide.at.step.11.bed2026-05-09 03:13 580  
[ ]repeats_wide.at.step.12.bed2026-05-09 05:08 609  
[ ]repeats_wide.at.step.13.bed2026-05-09 07:07 580  
[ ]repeats_wide.at.step.14.bed2026-05-09 09:49 580  
[ ]repeats_wide.at.step.15.bed2026-05-09 12:28 551  
[ ]repeats_wide.at.step.16.bed2026-05-09 15:11 580  
[ ]repeats_wide.at.step.17.bed2026-05-09 17:45 580  
[ ]repeats_wide.at.step.18.bed2026-05-09 20:03 551  
[ ]repeats_wide.at.step.19.bed2026-05-09 22:29 609  
[TXT]run-asm-pipeline-post-review.sh2026-05-07 03:20 11K 
[TXT]run-asm-pipeline.sh2026-05-07 03:20 44K 
[DIR]scaffold/2026-05-07 03:20 -  
[DIR]seal/2026-05-07 03:20 -  
[DIR]split/2026-05-07 03:20 -  
[DIR]split_chrom_aware/2026-05-07 03:20 -  
[DIR]supp/2026-05-07 03:20 -  
[ ]suspect.at.step.0.bed2026-05-07 23:06 4.9K 
[ ]suspect.at.step.1.bed2026-05-08 01:32 1.7K 
[ ]suspect.at.step.2.bed2026-05-08 03:59 1.5K 
[ ]suspect.at.step.3.bed2026-05-08 06:30 1.2K 
[ ]suspect.at.step.4.bed2026-05-08 09:10 1.3K 
[ ]suspect.at.step.5.bed2026-05-08 11:33 1.1K 
[ ]suspect.at.step.6.bed2026-05-08 13:57 1.3K 
[ ]suspect.at.step.7.bed2026-05-08 16:14 1.2K 
[ ]suspect.at.step.8.bed2026-05-08 18:32 1.0K 
[ ]suspect.at.step.9.bed2026-05-08 21:16 1.1K 
[ ]suspect.at.step.10.bed2026-05-09 00:14 1.1K 
[ ]suspect.at.step.11.bed2026-05-09 03:13 1.2K 
[ ]suspect.at.step.12.bed2026-05-09 05:08 1.2K 
[ ]suspect.at.step.13.bed2026-05-09 07:07 1.1K 
[ ]suspect.at.step.14.bed2026-05-09 09:49 1.1K 
[ ]suspect.at.step.15.bed2026-05-09 12:28 1.0K 
[ ]suspect.at.step.16.bed2026-05-09 15:11 1.1K 
[ ]suspect.at.step.17.bed2026-05-09 17:45 1.1K 
[ ]suspect.at.step.18.bed2026-05-09 20:03 1.0K 
[ ]suspect.at.step.19.bed2026-05-09 22:29 1.2K 
[TXT]suspect_2D.at.step.0.txt2026-05-07 23:06 37K 
[TXT]suspect_2D.at.step.1.txt2026-05-08 01:32 9.8K 
[TXT]suspect_2D.at.step.2.txt2026-05-08 03:59 6.1K 
[TXT]suspect_2D.at.step.3.txt2026-05-08 06:30 3.6K 
[TXT]suspect_2D.at.step.4.txt2026-05-08 09:10 2.6K 
[TXT]suspect_2D.at.step.5.txt2026-05-08 11:33 2.8K 
[TXT]suspect_2D.at.step.6.txt2026-05-08 13:57 2.5K 
[TXT]suspect_2D.at.step.7.txt2026-05-08 16:14 2.1K 
[TXT]suspect_2D.at.step.8.txt2026-05-08 18:32 2.0K 
[TXT]suspect_2D.at.step.9.txt2026-05-08 21:16 2.0K 
[TXT]suspect_2D.at.step.10.txt2026-05-09 00:14 2.0K 
[TXT]suspect_2D.at.step.11.txt2026-05-09 03:13 2.0K 
[TXT]suspect_2D.at.step.12.txt2026-05-09 05:08 2.0K 
[TXT]suspect_2D.at.step.13.txt2026-05-09 07:07 2.0K 
[TXT]suspect_2D.at.step.14.txt2026-05-09 09:49 2.0K 
[TXT]suspect_2D.at.step.15.txt2026-05-09 12:28 2.0K 
[TXT]suspect_2D.at.step.16.txt2026-05-09 15:11 2.0K 
[TXT]suspect_2D.at.step.17.txt2026-05-09 17:45 2.0K 
[TXT]suspect_2D.at.step.18.txt2026-05-09 20:03 2.0K 
[TXT]suspect_2D.at.step.19.txt2026-05-09 22:29 2.3K 
[DIR]utils/2026-05-07 03:20 -  
[DIR]visualize/2026-05-07 03:20 -  
[ ]zJuC50.1.err2026-05-10 01:50 54K 
[ ]zJuC50.1.out2026-05-10 02:49 86K 
[ ]zJuC50.1.sbatch2026-05-07 20:23 559  
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