Index of /kundaje/marinovg/oak/papers/2026_Chromera_Hi-C/2026-01-16-Ultima-run-Chromera/juicer-L1273+L4897-Chromera_velia-Hi-C-3D-r20

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]CDMZ01.0.asm2026-05-03 00:01 31K 
[ ]CDMZ01.0.assembly2026-05-03 00:11 284K 
[ ]CDMZ01.0.cprops2026-05-02 14:35 247K 
[ ]CDMZ01.0.hic2026-05-03 00:41 320M 
[TXT]CDMZ01.0_asm.scaffold_track.txt2026-05-03 00:11 827K 
[TXT]CDMZ01.0_asm.superscaf_track.txt2026-05-03 00:11 15K 
[ ]CDMZ01.1.asm2026-05-03 01:23 32K 
[ ]CDMZ01.1.assembly2026-05-03 01:25 302K 
[ ]CDMZ01.1.cprops2026-05-03 00:43 264K 
[ ]CDMZ01.1.hic2026-05-03 01:51 320M 
[TXT]CDMZ01.1_asm.scaffold_track.txt2026-05-03 01:25 869K 
[TXT]CDMZ01.1_asm.superscaf_track.txt2026-05-03 01:25 41K 
[ ]CDMZ01.2.asm2026-05-03 02:33 32K 
[ ]CDMZ01.2.assembly2026-05-03 02:35 306K 
[ ]CDMZ01.2.cprops2026-05-03 01:53 268K 
[ ]CDMZ01.2.hic2026-05-03 03:02 320M 
[TXT]CDMZ01.2_asm.scaffold_track.txt2026-05-03 02:35 878K 
[TXT]CDMZ01.2_asm.superscaf_track.txt2026-05-03 02:35 47K 
[ ]CDMZ01.3.asm2026-05-03 03:40 32K 
[ ]CDMZ01.3.assembly2026-05-03 03:42 308K 
[ ]CDMZ01.3.cprops2026-05-03 03:04 270K 
[ ]CDMZ01.3.hic2026-05-03 04:08 320M 
[TXT]CDMZ01.3_asm.scaffold_track.txt2026-05-03 03:42 882K 
[TXT]CDMZ01.3_asm.superscaf_track.txt2026-05-03 03:42 50K 
[ ]CDMZ01.4.asm2026-05-03 04:50 32K 
[ ]CDMZ01.4.assembly2026-05-03 04:52 309K 
[ ]CDMZ01.4.cprops2026-05-03 04:11 270K 
[ ]CDMZ01.4.hic2026-05-03 05:20 320M 
[TXT]CDMZ01.4_asm.scaffold_track.txt2026-05-03 04:52 883K 
[TXT]CDMZ01.4_asm.superscaf_track.txt2026-05-03 04:52 51K 
[ ]CDMZ01.5.asm2026-05-03 06:02 32K 
[ ]CDMZ01.5.assembly2026-05-03 06:04 309K 
[ ]CDMZ01.5.cprops2026-05-03 05:22 270K 
[ ]CDMZ01.5.hic2026-05-03 06:29 320M 
[TXT]CDMZ01.5_asm.scaffold_track.txt2026-05-03 06:04 884K 
[TXT]CDMZ01.5_asm.superscaf_track.txt2026-05-03 06:04 51K 
[ ]CDMZ01.6.asm2026-05-03 07:08 32K 
[ ]CDMZ01.6.assembly2026-05-03 07:11 309K 
[ ]CDMZ01.6.cprops2026-05-03 06:31 271K 
[ ]CDMZ01.6.hic2026-05-03 07:36 320M 
[TXT]CDMZ01.6_asm.scaffold_track.txt2026-05-03 07:11 885K 
[TXT]CDMZ01.6_asm.superscaf_track.txt2026-05-03 07:11 52K 
[ ]CDMZ01.7.asm2026-05-03 08:13 32K 
[ ]CDMZ01.7.assembly2026-05-03 08:15 310K 
[ ]CDMZ01.7.cprops2026-05-03 07:38 271K 
[ ]CDMZ01.7.hic2026-05-03 08:43 320M 
[TXT]CDMZ01.7_asm.scaffold_track.txt2026-05-03 08:15 886K 
[TXT]CDMZ01.7_asm.superscaf_track.txt2026-05-03 08:15 52K 
[ ]CDMZ01.8.asm2026-05-03 09:23 32K 
[ ]CDMZ01.8.assembly2026-05-03 09:25 310K 
[ ]CDMZ01.8.cprops2026-05-03 08:45 271K 
[ ]CDMZ01.8.hic2026-05-03 09:52 320M 
[TXT]CDMZ01.8_asm.scaffold_track.txt2026-05-03 09:25 886K 
[TXT]CDMZ01.8_asm.superscaf_track.txt2026-05-03 09:25 53K 
[ ]CDMZ01.9.asm2026-05-03 10:32 32K 
[ ]CDMZ01.9.assembly2026-05-03 10:34 310K 
[ ]CDMZ01.9.cprops2026-05-03 09:54 271K 
[ ]CDMZ01.9.hic2026-05-03 11:01 320M 
[TXT]CDMZ01.9_asm.scaffold_track.txt2026-05-03 10:34 887K 
[TXT]CDMZ01.9_asm.superscaf_track.txt2026-05-03 10:34 53K 
[ ]CDMZ01.10.asm2026-05-03 11:40 32K 
[ ]CDMZ01.10.assembly2026-05-03 11:43 310K 
[ ]CDMZ01.10.cprops2026-05-03 11:03 272K 
[ ]CDMZ01.10.hic2026-05-03 12:09 320M 
[TXT]CDMZ01.10_asm.scaffold_track.txt2026-05-03 11:43 887K 
[TXT]CDMZ01.10_asm.superscaf_track.txt2026-05-03 11:43 53K 
[ ]CDMZ01.11.asm2026-05-03 13:34 32K 
[ ]CDMZ01.11.assembly2026-05-03 13:36 310K 
[ ]CDMZ01.11.cprops2026-05-03 12:11 272K 
[ ]CDMZ01.11.hic2026-05-03 14:03 320M 
[TXT]CDMZ01.11_asm.scaffold_track.txt2026-05-03 13:36 887K 
[TXT]CDMZ01.11_asm.superscaf_track.txt2026-05-03 13:36 53K 
[ ]CDMZ01.12.asm2026-05-03 14:43 32K 
[ ]CDMZ01.12.assembly2026-05-03 14:46 310K 
[ ]CDMZ01.12.cprops2026-05-03 14:05 272K 
[ ]CDMZ01.12.hic2026-05-03 15:12 320M 
[TXT]CDMZ01.12_asm.scaffold_track.txt2026-05-03 14:46 887K 
[TXT]CDMZ01.12_asm.superscaf_track.txt2026-05-03 14:46 53K 
[ ]CDMZ01.13.asm2026-05-03 15:52 32K 
[ ]CDMZ01.13.assembly2026-05-03 15:54 310K 
[ ]CDMZ01.13.cprops2026-05-03 15:15 272K 
[ ]CDMZ01.13.hic2026-05-03 16:22 320M 
[TXT]CDMZ01.13_asm.scaffold_track.txt2026-05-03 15:54 887K 
[TXT]CDMZ01.13_asm.superscaf_track.txt2026-05-03 15:54 53K 
[ ]CDMZ01.14.asm2026-05-03 17:42 32K 
[ ]CDMZ01.14.assembly2026-05-03 17:44 310K 
[ ]CDMZ01.14.cprops2026-05-03 16:24 272K 
[ ]CDMZ01.14.hic2026-05-03 18:11 320M 
[TXT]CDMZ01.14_asm.scaffold_track.txt2026-05-03 17:44 887K 
[TXT]CDMZ01.14_asm.superscaf_track.txt2026-05-03 17:44 54K 
[ ]CDMZ01.15.asm2026-05-03 19:36 32K 
[ ]CDMZ01.15.assembly2026-05-03 19:38 310K 
[ ]CDMZ01.15.cprops2026-05-03 18:14 272K 
[ ]CDMZ01.15.hic2026-05-03 20:05 320M 
[TXT]CDMZ01.15_asm.scaffold_track.txt2026-05-03 19:38 888K 
[TXT]CDMZ01.15_asm.superscaf_track.txt2026-05-03 19:38 54K 
[ ]CDMZ01.16.asm2026-05-03 20:48 32K 
[ ]CDMZ01.16.assembly2026-05-03 20:50 311K 
[ ]CDMZ01.16.cprops2026-05-03 20:07 272K 
[ ]CDMZ01.16.hic2026-05-03 21:17 320M 
[TXT]CDMZ01.16_asm.scaffold_track.txt2026-05-03 20:50 888K 
[TXT]CDMZ01.16_asm.superscaf_track.txt2026-05-03 20:50 54K 
[ ]CDMZ01.17.asm2026-05-03 21:56 32K 
[ ]CDMZ01.17.assembly2026-05-03 21:58 311K 
[ ]CDMZ01.17.cprops2026-05-03 21:19 272K 
[ ]CDMZ01.17.hic2026-05-03 22:26 320M 
[TXT]CDMZ01.17_asm.scaffold_track.txt2026-05-03 21:58 888K 
[TXT]CDMZ01.17_asm.superscaf_track.txt2026-05-03 21:58 54K 
[ ]CDMZ01.18.asm2026-05-03 23:05 32K 
[ ]CDMZ01.18.assembly2026-05-03 23:07 311K 
[ ]CDMZ01.18.cprops2026-05-03 22:28 272K 
[ ]CDMZ01.18.hic2026-05-03 23:34 320M 
[TXT]CDMZ01.18_asm.scaffold_track.txt2026-05-03 23:07 888K 
[TXT]CDMZ01.18_asm.superscaf_track.txt2026-05-03 23:07 54K 
[ ]CDMZ01.19.asm2026-05-04 00:12 32K 
[ ]CDMZ01.19.assembly2026-05-04 00:14 311K 
[ ]CDMZ01.19.cprops2026-05-03 23:36 272K 
[ ]CDMZ01.19.hic2026-05-04 00:41 320M 
[TXT]CDMZ01.19_asm.scaffold_track.txt2026-05-04 00:14 888K 
[TXT]CDMZ01.19_asm.superscaf_track.txt2026-05-04 00:14 54K 
[ ]CDMZ01.FINAL.assembly2026-05-04 02:50 335K 
[ ]CDMZ01.FINAL.fasta2026-05-04 02:50 190M 
[ ]CDMZ01.FINAL.hic2026-05-04 03:31 322M 
[TXT]CDMZ01.FINAL_asm.scaffold_track.txt2026-05-04 03:03 879K 
[TXT]CDMZ01.FINAL_asm.superscaf_track.txt2026-05-04 03:03 48K 
[ ]CDMZ01.cprops2026-05-02 14:35 247K 
[TXT]CDMZ01.edits.txt2026-05-03 23:36 39K 
[ ]CDMZ01.final.asm2026-05-04 02:09 32K 
[ ]CDMZ01.final.assembly2026-05-04 02:22 307K 
[ ]CDMZ01.final.cprops2026-05-04 02:09 268K 
[ ]CDMZ01.final.fasta2026-05-04 02:49 187M 
[ ]CDMZ01.final.hic2026-05-04 02:49 320M 
[TXT]CDMZ01.mnd.txt2026-02-04 17:13 169G 
[ ]CDMZ01.polished.asm2026-05-04 01:03 33K 
[ ]CDMZ01.polished.cprops2026-05-04 00:46 272K 
[ ]CDMZ01.polished.depletion_score_narrow.wig2026-05-04 00:46 2.7M 
[ ]CDMZ01.polished.depletion_score_wide.wig2026-05-04 00:43 32K 
[TXT]CDMZ01.polished.edits_2D.txt2026-05-04 00:46 162  
[ ]CDMZ01.polished.hic2026-05-04 01:33 320M 
[ ]CDMZ01.polished.mismatch_narrow.bed2026-05-04 00:46 112  
[ ]CDMZ01.polished.mismatch_wide.bed2026-05-04 00:43 112  
[TXT]CDMZ01.polished.mismatches_2D.txt2026-05-04 00:46 705  
[ ]CDMZ01.polished.split.assembly2026-05-04 01:42 311K 
[ ]CDMZ01.polished.split.depletion_score_narrow.wig2026-05-04 01:35 2.7M 
[ ]CDMZ01.polished.split.depletion_score_wide.wig2026-05-04 01:33 32K 
[TXT]CDMZ01.polished.split.edits_2D.txt2026-05-04 01:35 47  
[ ]CDMZ01.polished.split.mismatch_narrow.bed2026-05-04 01:35 110  
[ ]CDMZ01.polished.split.mismatch_wide.bed2026-05-04 01:33 110  
[TXT]CDMZ01.polished.split.mismatches_2D.txt2026-05-04 01:35 919  
[TXT]CDMZ01.polished.split.suspicious_2D.txt2026-05-04 01:35 919  
[TXT]CDMZ01.polished.suspect_2D.txt2026-05-04 00:46 820  
[TXT]CDMZ01.polished_asm.scaffold_track.txt2026-05-04 01:06 888K 
[TXT]CDMZ01.polished_asm.superscaf_track.txt2026-05-04 01:06 54K 
[ ]CDMZ01.rawchrom.asm2026-05-04 02:09 32K 
[ ]CDMZ01.rawchrom.assembly2026-05-04 02:22 307K 
[ ]CDMZ01.rawchrom.cprops2026-05-04 02:09 268K 
[ ]CDMZ01.rawchrom.fasta2026-05-04 02:49 187M 
[ ]CDMZ01.rawchrom.hic2026-05-04 02:49 320M 
[TXT]CDMZ01.rawchrom_asm.scaffold_track.txt2026-05-04 02:22 878K 
[TXT]CDMZ01.rawchrom_asm.superscaf_track.txt2026-05-04 02:22 48K 
[ ]CDMZ01.resolved.asm2026-05-04 00:12 32K 
[ ]CDMZ01.resolved.cprops2026-05-03 23:36 272K 
[ ]CDMZ01.resolved.hic2026-05-04 00:41 320M 
[ ]CDMZ01.resolved.polish.assembly2026-05-04 01:06 311K 
[TXT]CDMZ01.resolved_asm.scaffold_track.txt2026-05-04 00:14 888K 
[TXT]CDMZ01.resolved_asm.superscaf_track.txt2026-05-04 00:14 54K 
[ ]CDMZ01.split.asm2026-05-04 01:39 33K 
[ ]CDMZ01.split.assembly2026-05-04 02:09 311K 
[ ]CDMZ01.split.cprops2026-05-04 01:35 272K 
[ ]CDMZ01.split.hic2026-05-04 02:09 320M 
[TXT]CDMZ01.split_asm.scaffold_track.txt2026-05-04 01:42 888K 
[TXT]CDMZ01.split_asm.superscaf_track.txt2026-05-04 01:42 55K 
[ ]LICENSE2026-05-02 14:33 1.0K 
[TXT]README.md2026-05-02 14:33 8.7K 
[TXT]archive.CDMZ01.edits.at.step.1.txt2026-05-03 01:53 27K 
[TXT]archive.CDMZ01.edits.at.step.2.txt2026-05-03 03:04 32K 
[TXT]archive.CDMZ01.edits.at.step.3.txt2026-05-03 04:11 35K 
[TXT]archive.CDMZ01.edits.at.step.4.txt2026-05-03 05:22 36K 
[TXT]archive.CDMZ01.edits.at.step.5.txt2026-05-03 06:31 36K 
[TXT]archive.CDMZ01.edits.at.step.6.txt2026-05-03 07:38 37K 
[TXT]archive.CDMZ01.edits.at.step.7.txt2026-05-03 08:45 37K 
[TXT]archive.CDMZ01.edits.at.step.8.txt2026-05-03 09:54 37K 
[TXT]archive.CDMZ01.edits.at.step.9.txt2026-05-03 11:03 37K 
[TXT]archive.CDMZ01.edits.at.step.10.txt2026-05-03 12:11 38K 
[TXT]archive.CDMZ01.edits.at.step.11.txt2026-05-03 14:05 38K 
[TXT]archive.CDMZ01.edits.at.step.12.txt2026-05-03 15:14 38K 
[TXT]archive.CDMZ01.edits.at.step.13.txt2026-05-03 16:24 38K 
[TXT]archive.CDMZ01.edits.at.step.14.txt2026-05-03 18:14 38K 
[TXT]archive.CDMZ01.edits.at.step.15.txt2026-05-03 20:07 38K 
[TXT]archive.CDMZ01.edits.at.step.16.txt2026-05-03 21:19 38K 
[TXT]archive.CDMZ01.edits.at.step.17.txt2026-05-03 22:28 38K 
[TXT]archive.CDMZ01.edits.at.step.18.txt2026-05-03 23:36 38K 
[ ]coverage_wide.at.step.0.wig2026-05-03 00:43 142K 
[ ]coverage_wide.at.step.1.wig2026-05-03 01:53 142K 
[ ]coverage_wide.at.step.2.wig2026-05-03 03:04 142K 
[ ]coverage_wide.at.step.3.wig2026-05-03 04:11 142K 
[ ]coverage_wide.at.step.4.wig2026-05-03 05:22 142K 
[ ]coverage_wide.at.step.5.wig2026-05-03 06:31 142K 
[ ]coverage_wide.at.step.6.wig2026-05-03 07:38 142K 
[ ]coverage_wide.at.step.7.wig2026-05-03 08:45 142K 
[ ]coverage_wide.at.step.8.wig2026-05-03 09:54 142K 
[ ]coverage_wide.at.step.9.wig2026-05-03 11:03 142K 
[ ]coverage_wide.at.step.10.wig2026-05-03 12:11 142K 
[ ]coverage_wide.at.step.11.wig2026-05-03 14:05 142K 
[ ]coverage_wide.at.step.12.wig2026-05-03 15:14 142K 
[ ]coverage_wide.at.step.13.wig2026-05-03 16:24 142K 
[ ]coverage_wide.at.step.14.wig2026-05-03 18:14 142K 
[ ]coverage_wide.at.step.15.wig2026-05-03 20:07 142K 
[ ]coverage_wide.at.step.16.wig2026-05-03 21:19 142K 
[ ]coverage_wide.at.step.17.wig2026-05-03 22:28 142K 
[ ]coverage_wide.at.step.18.wig2026-05-03 23:36 142K 
[ ]coverage_wide.at.step.19.wig2026-05-04 00:43 142K 
[DIR]data/2026-05-02 14:33 -  
[ ]depletion_score_narrow.at.step.0.wig2026-05-03 00:43 2.5M 
[ ]depletion_score_narrow.at.step.1.wig2026-05-03 01:53 2.5M 
[ ]depletion_score_narrow.at.step.2.wig2026-05-03 03:04 2.5M 
[ ]depletion_score_narrow.at.step.3.wig2026-05-03 04:11 2.5M 
[ ]depletion_score_narrow.at.step.4.wig2026-05-03 05:22 2.5M 
[ ]depletion_score_narrow.at.step.5.wig2026-05-03 06:31 2.5M 
[ ]depletion_score_narrow.at.step.6.wig2026-05-03 07:38 2.5M 
[ ]depletion_score_narrow.at.step.7.wig2026-05-03 08:45 2.5M 
[ ]depletion_score_narrow.at.step.8.wig2026-05-03 09:54 2.5M 
[ ]depletion_score_narrow.at.step.9.wig2026-05-03 11:03 2.5M 
[ ]depletion_score_narrow.at.step.10.wig2026-05-03 12:11 2.5M 
[ ]depletion_score_narrow.at.step.11.wig2026-05-03 14:05 2.5M 
[ ]depletion_score_narrow.at.step.12.wig2026-05-03 15:14 2.5M 
[ ]depletion_score_narrow.at.step.13.wig2026-05-03 16:24 2.5M 
[ ]depletion_score_narrow.at.step.14.wig2026-05-03 18:14 2.5M 
[ ]depletion_score_narrow.at.step.15.wig2026-05-03 20:07 2.5M 
[ ]depletion_score_narrow.at.step.16.wig2026-05-03 21:19 2.5M 
[ ]depletion_score_narrow.at.step.17.wig2026-05-03 22:28 2.5M 
[ ]depletion_score_narrow.at.step.18.wig2026-05-03 23:36 2.5M 
[ ]depletion_score_narrow.at.step.19.wig2026-05-04 00:43 2.5M 
[ ]depletion_score_wide.at.step.0.wig2026-05-03 00:41 132K 
[ ]depletion_score_wide.at.step.1.wig2026-05-03 01:52 132K 
[ ]depletion_score_wide.at.step.2.wig2026-05-03 03:03 132K 
[ ]depletion_score_wide.at.step.3.wig2026-05-03 04:09 124K 
[ ]depletion_score_wide.at.step.4.wig2026-05-03 05:21 132K 
[ ]depletion_score_wide.at.step.5.wig2026-05-03 06:30 117K 
[ ]depletion_score_wide.at.step.6.wig2026-05-03 07:37 132K 
[ ]depletion_score_wide.at.step.7.wig2026-05-03 08:43 132K 
[ ]depletion_score_wide.at.step.8.wig2026-05-03 09:53 132K 
[ ]depletion_score_wide.at.step.9.wig2026-05-03 11:02 132K 
[ ]depletion_score_wide.at.step.10.wig2026-05-03 12:09 132K 
[ ]depletion_score_wide.at.step.11.wig2026-05-03 14:04 132K 
[ ]depletion_score_wide.at.step.12.wig2026-05-03 15:13 132K 
[ ]depletion_score_wide.at.step.13.wig2026-05-03 16:23 132K 
[ ]depletion_score_wide.at.step.14.wig2026-05-03 18:12 132K 
[ ]depletion_score_wide.at.step.15.wig2026-05-03 20:05 132K 
[ ]depletion_score_wide.at.step.16.wig2026-05-03 21:17 132K 
[ ]depletion_score_wide.at.step.17.wig2026-05-03 22:27 132K 
[ ]depletion_score_wide.at.step.18.wig2026-05-03 23:35 132K 
[ ]depletion_score_wide.at.step.19.wig2026-05-04 00:42 132K 
[DIR]edit/2026-05-02 14:33 -  
[TXT]edits.for.step.1.txt2026-05-03 00:43 25K 
[TXT]edits.for.step.2.txt2026-05-03 01:53 6.2K 
[TXT]edits.for.step.3.txt2026-05-03 03:04 2.7K 
[TXT]edits.for.step.4.txt2026-05-03 04:11 1.3K 
[TXT]edits.for.step.5.txt2026-05-03 05:22 269  
[TXT]edits.for.step.6.txt2026-05-03 06:31 384  
[TXT]edits.for.step.7.txt2026-05-03 07:38 261  
[TXT]edits.for.step.8.txt2026-05-03 08:45 269  
[TXT]edits.for.step.9.txt2026-05-03 09:54 269  
[TXT]edits.for.step.10.txt2026-05-03 11:03 269  
[TXT]edits.for.step.11.txt2026-05-03 12:11 154  
[TXT]edits.for.step.12.txt2026-05-03 14:05 154  
[TXT]edits.for.step.13.txt2026-05-03 15:14 154  
[TXT]edits.for.step.14.txt2026-05-03 16:24 154  
[TXT]edits.for.step.15.txt2026-05-03 18:14 154  
[TXT]edits.for.step.16.txt2026-05-03 20:07 154  
[TXT]edits.for.step.17.txt2026-05-03 21:19 154  
[TXT]edits.for.step.18.txt2026-05-03 22:28 154  
[TXT]edits.for.step.19.txt2026-05-03 23:36 154  
[DIR]finalize/2026-05-02 14:33 -  
[TXT]h.edits.txt2026-05-04 01:35 47  
[DIR]lift/2026-05-02 14:33 -  
[DIR]merge/2026-05-02 14:33 -  
[ ]mismatch_narrow.at.step.0.bed2026-05-03 00:43 3.9K 
[ ]mismatch_narrow.at.step.1.bed2026-05-03 01:53 1.3K 
[ ]mismatch_narrow.at.step.2.bed2026-05-03 03:04 1.1K 
[ ]mismatch_narrow.at.step.3.bed2026-05-03 04:11 949  
[ ]mismatch_narrow.at.step.4.bed2026-05-03 05:22 908  
[ ]mismatch_narrow.at.step.5.bed2026-05-03 06:31 920  
[ ]mismatch_narrow.at.step.6.bed2026-05-03 07:38 914  
[ ]mismatch_narrow.at.step.7.bed2026-05-03 08:45 833  
[ ]mismatch_narrow.at.step.8.bed2026-05-03 09:54 804  
[ ]mismatch_narrow.at.step.9.bed2026-05-03 11:03 746  
[ ]mismatch_narrow.at.step.10.bed2026-05-03 12:11 804  
[ ]mismatch_narrow.at.step.11.bed2026-05-03 14:05 833  
[ ]mismatch_narrow.at.step.12.bed2026-05-03 15:14 833  
[ ]mismatch_narrow.at.step.13.bed2026-05-03 16:24 862  
[ ]mismatch_narrow.at.step.14.bed2026-05-03 18:14 804  
[ ]mismatch_narrow.at.step.15.bed2026-05-03 20:07 862  
[ ]mismatch_narrow.at.step.16.bed2026-05-03 21:19 862  
[ ]mismatch_narrow.at.step.17.bed2026-05-03 22:28 862  
[ ]mismatch_narrow.at.step.18.bed2026-05-03 23:36 833  
[ ]mismatch_narrow.at.step.19.bed2026-05-04 00:43 862  
[ ]mismatch_wide.at.step.0.bed2026-05-03 00:41 3.6K 
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[ ]mismatch_wide.at.step.3.bed2026-05-03 04:09 514  
[ ]mismatch_wide.at.step.4.bed2026-05-03 05:21 589  
[ ]mismatch_wide.at.step.5.bed2026-05-03 06:30 572  
[ ]mismatch_wide.at.step.6.bed2026-05-03 07:37 508  
[ ]mismatch_wide.at.step.7.bed2026-05-03 08:43 427  
[ ]mismatch_wide.at.step.8.bed2026-05-03 09:53 456  
[ ]mismatch_wide.at.step.9.bed2026-05-03 11:02 427  
[ ]mismatch_wide.at.step.10.bed2026-05-03 12:09 456  
[ ]mismatch_wide.at.step.11.bed2026-05-03 14:04 485  
[ ]mismatch_wide.at.step.12.bed2026-05-03 15:13 514  
[ ]mismatch_wide.at.step.13.bed2026-05-03 16:23 543  
[ ]mismatch_wide.at.step.14.bed2026-05-03 18:12 485  
[ ]mismatch_wide.at.step.15.bed2026-05-03 20:05 485  
[ ]mismatch_wide.at.step.16.bed2026-05-03 21:17 485  
[ ]mismatch_wide.at.step.17.bed2026-05-03 22:27 485  
[ ]mismatch_wide.at.step.18.bed2026-05-03 23:35 485  
[ ]mismatch_wide.at.step.19.bed2026-05-04 00:42 514  
[TXT]mismatches.at.step.0.txt2026-05-03 00:43 12K 
[TXT]mismatches.at.step.1.txt2026-05-03 01:53 3.6K 
[TXT]mismatches.at.step.2.txt2026-05-03 03:04 3.5K 
[TXT]mismatches.at.step.3.txt2026-05-03 04:11 2.3K 
[TXT]mismatches.at.step.4.txt2026-05-03 05:22 2.4K 
[TXT]mismatches.at.step.5.txt2026-05-03 06:31 2.5K 
[TXT]mismatches.at.step.6.txt2026-05-03 07:38 2.3K 
[TXT]mismatches.at.step.7.txt2026-05-03 08:45 1.9K 
[TXT]mismatches.at.step.8.txt2026-05-03 09:54 1.8K 
[TXT]mismatches.at.step.9.txt2026-05-03 11:03 1.8K 
[TXT]mismatches.at.step.10.txt2026-05-03 12:11 1.9K 
[TXT]mismatches.at.step.11.txt2026-05-03 14:05 1.9K 
[TXT]mismatches.at.step.12.txt2026-05-03 15:14 1.9K 
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[TXT]mismatches.at.step.19.txt2026-05-04 00:43 2.3K 
[DIR]polish/2026-05-02 14:33 -  
[ ]repeats_wide.at.step.0.bed2026-05-03 00:43 1.0K 
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[ ]repeats_wide.at.step.12.bed2026-05-03 15:14 609  
[ ]repeats_wide.at.step.13.bed2026-05-03 16:24 580  
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[ ]repeats_wide.at.step.19.bed2026-05-04 00:43 609  
[TXT]run-asm-pipeline-post-review.sh2026-05-02 14:33 11K 
[TXT]run-asm-pipeline.sh2026-05-02 14:33 44K 
[DIR]scaffold/2026-05-02 14:33 -  
[DIR]seal/2026-05-02 14:33 -  
[DIR]split/2026-05-02 14:33 -  
[DIR]split_chrom_aware/2026-05-02 14:33 -  
[DIR]supp/2026-05-02 14:33 -  
[ ]suspect.at.step.0.bed2026-05-03 00:43 4.9K 
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[ ]suspect.at.step.2.bed2026-05-03 03:04 1.5K 
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[ ]suspect.at.step.12.bed2026-05-03 15:14 1.2K 
[ ]suspect.at.step.13.bed2026-05-03 16:24 1.1K 
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[ ]suspect.at.step.17.bed2026-05-03 22:28 1.1K 
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[TXT]suspect_2D.at.step.0.txt2026-05-03 00:43 37K 
[TXT]suspect_2D.at.step.1.txt2026-05-03 01:53 9.8K 
[TXT]suspect_2D.at.step.2.txt2026-05-03 03:04 6.1K 
[TXT]suspect_2D.at.step.3.txt2026-05-03 04:11 3.6K 
[TXT]suspect_2D.at.step.4.txt2026-05-03 05:22 2.6K 
[TXT]suspect_2D.at.step.5.txt2026-05-03 06:31 2.8K 
[TXT]suspect_2D.at.step.6.txt2026-05-03 07:38 2.5K 
[TXT]suspect_2D.at.step.7.txt2026-05-03 08:45 2.1K 
[TXT]suspect_2D.at.step.8.txt2026-05-03 09:54 2.0K 
[TXT]suspect_2D.at.step.9.txt2026-05-03 11:03 2.0K 
[TXT]suspect_2D.at.step.10.txt2026-05-03 12:11 2.0K 
[TXT]suspect_2D.at.step.11.txt2026-05-03 14:05 2.0K 
[TXT]suspect_2D.at.step.12.txt2026-05-03 15:14 2.0K 
[TXT]suspect_2D.at.step.13.txt2026-05-03 16:24 2.0K 
[TXT]suspect_2D.at.step.14.txt2026-05-03 18:14 2.0K 
[TXT]suspect_2D.at.step.15.txt2026-05-03 20:07 2.0K 
[TXT]suspect_2D.at.step.16.txt2026-05-03 21:19 2.0K 
[TXT]suspect_2D.at.step.17.txt2026-05-03 22:28 2.0K 
[TXT]suspect_2D.at.step.18.txt2026-05-03 23:36 2.0K 
[TXT]suspect_2D.at.step.19.txt2026-05-04 00:43 2.3K 
[DIR]utils/2026-05-02 14:33 -  
[DIR]visualize/2026-05-02 14:33 -  
[ ]z2026-05-02 14:34 346  
[ ]zJuC2.1.err2026-05-04 03:00 54K 
[ ]zJuC2.1.out2026-05-04 03:31 86K 
[ ]zJuC2.1.sbatch2026-05-02 14:34 557  
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