python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- RNAP_beta_42C_rep1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RNAP_beta_42C_rep1.SE.a.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- RNAP_beta_42C_rep1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RNAP_beta_42C_rep1.SE.a.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- RNAP_beta_42C_rep2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RNAP_beta_42C_rep2.SE.a.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- RNAP_beta_42C_rep2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes RNAP_beta_42C_rep2.SE.a.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- SigH_30C_rep1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes SigH_30C_rep1.SE.a.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- SigH_30C_rep1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes SigH_30C_rep1.SE.a.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- SigH_30C_rep2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes SigH_30C_rep2.SE.a.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- SigH_30C_rep2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes SigH_30C_rep2.SE.a.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- SigH_42C_rep1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes SigH_42C_rep1.SE.a.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- SigH_42C_rep1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes SigH_42C_rep1.SE.a.minus.wig -notitle -RPM -uniqueBAM -stranded -
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- SigH_42C_rep2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes SigH_42C_rep2.SE.a.plus.wig -notitle -RPM -uniqueBAM -stranded +
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- SigH_42C_rep2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes SigH_42C_rep2.SE.a.minus.wig -notitle -RPM -uniqueBAM -stranded -