RpoC_HS_i5006_DY330_rep4_21324	21324_RpoC_HS_i5006_DY330_rep4.end1.fastq.gz	21324_RpoC_HS_i5006_DY330_rep4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoC_HS_i5006_DY330_rep3_21323	21323_RpoC_HS_i5006_DY330_rep3.end1.fastq.gz	21323_RpoC_HS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoC_MHS_i5006_DY330_rep1_20223	20223_RpoC_MHS_i5006_DY330_rep1.end1.fastq.gz	20223_RpoC_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoN_HS_i5006_DY330_rep2_20230	20230_RpoN_HS_i5006_DY330_rep2.end1.fastq.gz	20230_RpoN_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoN_HS_i5006_DY330_rep1_20229	20229_RpoN_HS_i5006_DY330_rep1.end1.fastq.gz	20229_RpoN_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
HimD_HS_i5006_DY330_rep2_20228	20228_HimD_HS_i5006_DY330_rep2.end1.fastq.gz	20228_HimD_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoA_HS_i5006_DY330_rep1_19790	19790_RpoA_HS_i5006_DY330_rep1.end1.fastq.gz	19790_RpoA_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoH_HS_i5006_DY330_rep2_17280	17280_RpoH_HS_i5006_DY330_rep2.end1.fastq.gz	17280_RpoH_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoB_MHS_i5006_DY330_rep3_21315	21315_RpoB_MHS_i5006_DY330_rep3.end1.fastq.gz	21315_RpoB_MHS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
Fis_HS_i5006_DY330_rep1_19786	19786_Fis_HS_i5006_DY330_rep1.end1.fastq.gz	19786_Fis_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
MglB_HS_i5006_DY330_rep1_17259	17259_MglB_HS_i5006_DY330_rep1.end1.fastq.gz	17259_MglB_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoC_HS_i5006_DY330_rep2_20232	20232_RpoC_HS_i5006_DY330_rep2.end1.fastq.gz	20232_RpoC_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoC_HS_i5006_DY330_rep1_20231	20231_RpoC_HS_i5006_DY330_rep1.end1.fastq.gz	20231_RpoC_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoC_MHS_i5006_DY330_rep4_21317	21317_RpoC_MHS_i5006_DY330_rep4.end1.fastq.gz	21317_RpoC_MHS_i5006_DY330_rep4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoC_MHS_i5006_DY330_rep3_21316	21316_RpoC_MHS_i5006_DY330_rep3.end1.fastq.gz	21316_RpoC_MHS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoC_MHS_i5006_DY330_rep2_20224	20224_RpoC_MHS_i5006_DY330_rep2.end1.fastq.gz	20224_RpoC_MHS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoN_MHS_i5006_DY330_rep2_20222	20222_RpoN_MHS_i5006_DY330_rep2.end1.fastq.gz	20222_RpoN_MHS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoN_MHS_i5006_DY330_rep1_20221	20221_RpoN_MHS_i5006_DY330_rep1.end1.fastq.gz	20221_RpoN_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
HimD_HS_i5006_DY330_rep1_20227	20227_HimD_HS_i5006_DY330_rep1.end1.fastq.gz	20227_HimD_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
HimD_MHS_i5006_DY330_rep3_21320	21320_HimD_MHS_i5006_DY330_rep3.end1.fastq.gz	21320_HimD_MHS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
HimD_MHS_i5006_DY330_rep1_20219	20219_HimD_MHS_i5006_DY330_rep1.end1.fastq.gz	20219_HimD_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoA_MHS_i5006_DY330_rep3_21299	21299_RpoA_MHS_i5006_DY330_rep3.end1.fastq.gz	21299_RpoA_MHS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoA_MHS_i5006_DY330_rep1_19784	19784_RpoA_MHS_i5006_DY330_rep1.end1.fastq.gz	19784_RpoA_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoH_HS_i5006_DY330_rep3_21313	21313_RpoH_HS_i5006_DY330_rep3.end1.fastq.gz	21313_RpoH_HS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoH_MHS_i5006_DY330_rep4_21306	21306_RpoH_MHS_i5006_DY330_rep4.end1.fastq.gz	21306_RpoH_MHS_i5006_DY330_rep4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoH_MHS_i5006_DY330_rep2_17273	17273_RpoH_MHS_i5006_DY330_rep2.end1.fastq.gz	17273_RpoH_MHS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoH_MHS_i5006_DY330_rep1_17257	17257_RpoH_MHS_i5006_DY330_rep1.end1.fastq.gz	17257_RpoH_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoD_HS_i5006_DY330_rep2_17276	17276_RpoD_HS_i5006_DY330_rep2.end1.fastq.gz	17276_RpoD_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoD_MHS_i5006_DY330_rep2_17269	17269_RpoD_MHS_i5006_DY330_rep2.end1.fastq.gz	17269_RpoD_MHS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoB_HS_i5006_DY330_rep3_21322	21322_RpoB_HS_i5006_DY330_rep3.end1.fastq.gz	21322_RpoB_HS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoB_MHS_i5006_DY330_rep2_17268	17268_RpoB_MHS_i5006_DY330_rep2.end1.fastq.gz	17268_RpoB_MHS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
MglB_MHS_i5006_DY330_rep2_17267	17267_MglB_MHS_i5006_DY330_rep2.end1.fastq.gz	17267_MglB_MHS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
HimD_HS_i5006_DY330_rep3_21327	21327_HimD_HS_i5006_DY330_rep3.end1.fastq.gz	21327_HimD_HS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
HimD_MHS_i5006_DY330_rep2_20220	20220_HimD_MHS_i5006_DY330_rep2.end1.fastq.gz	20220_HimD_MHS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoA_HS_i5006_DY330_rep3_21307	21307_RpoA_HS_i5006_DY330_rep3.end1.fastq.gz	21307_RpoA_HS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoA_HS_i5006_DY330_rep2_20240	20240_RpoA_HS_i5006_DY330_rep2.end1.fastq.gz	20240_RpoA_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoA_MHS_i5006_DY330_rep2_20236	20236_RpoA_MHS_i5006_DY330_rep2.end1.fastq.gz	20236_RpoA_MHS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoH_HS_i5006_DY330_rep4_21314	21314_RpoH_HS_i5006_DY330_rep4.end1.fastq.gz	21314_RpoH_HS_i5006_DY330_rep4.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoH_HS_i5006_DY330_rep1_17265	17265_RpoH_HS_i5006_DY330_rep1.end1.fastq.gz	17265_RpoH_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoH_MHS_i5006_DY330_rep3_21305	21305_RpoH_MHS_i5006_DY330_rep3.end1.fastq.gz	21305_RpoH_MHS_i5006_DY330_rep3.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoD_HS_i5006_DY330_rep1_17261	17261_RpoD_HS_i5006_DY330_rep1.end1.fastq.gz	17261_RpoD_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoD_MHS_i5006_DY330_rep1_17253	17253_RpoD_MHS_i5006_DY330_rep1.end1.fastq.gz	17253_RpoD_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoB_HS_i5006_DY330_rep2_17275	17275_RpoB_HS_i5006_DY330_rep2.end1.fastq.gz	17275_RpoB_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoB_HS_i5006_DY330_rep1_17260	17260_RpoB_HS_i5006_DY330_rep1.end1.fastq.gz	17260_RpoB_HS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
RpoB_MHS_i5006_DY330_rep1_17252	17252_RpoB_MHS_i5006_DY330_rep1.end1.fastq.gz	17252_RpoB_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
Fis_HS_i5006_DY330_rep2_20238	20238_Fis_HS_i5006_DY330_rep2.end1.fastq.gz	20238_Fis_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
Fis_MHS_i5006_DY330_rep1_20234	20234_Fis_MHS_i5006_DY330_rep1.end1.fastq.gz	20234_Fis_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
Fis_MHS_i5006_DY330_rep1_19780	19780_Fis_MHS_i5006_DY330_rep1.end1.fastq.gz	19780_Fis_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
MglB_HS_i5006_DY330_rep2_17274	17274_MglB_HS_i5006_DY330_rep2.end1.fastq.gz	17274_MglB_HS_i5006_DY330_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes
MglB_MHS_i5006_DY330_rep1_17251	17251_MglB_MHS_i5006_DY330_rep1.end1.fastq.gz	17251_MglB_MHS_i5006_DY330_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/bowtie-indexes/GCA_000005845.2_ASM584v2_genomic	/oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes