File accession File format File type File format type Output type File assembly Experiment accession Assay Donor(s) Biosample term id Biosample term name Biosample type Biosample organism Biosample treatments Biosample treatments amount Biosample treatments duration Biosample genetic modifications methods Biosample genetic modifications categories Biosample genetic modifications targets Biosample genetic modifications gene targets Biosample genetic modifications site coordinates Biosample genetic modifications zygosity Experiment target Library made from Library depleted in Library extraction method Library lysis method Library crosslinking method Library strand specific Experiment date released Project RBNS protein concentration Library fragmentation method Library size range Biological replicate(s) Technical replicate(s) Read length Mapped read length Run type Paired end Paired with Index of Derived from Size Lab md5sum dbxrefs File download URL Genome annotation Platform Controlled by File Status s3_uri Azure URL File analysis title File analysis status Audit WARNING Audit NOT_COMPLIANT Audit ERROR ENCFF927CUF bigWig bigWig signal p-value GRCh38 ENCSR691IQB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'schema_version': '14', 'aliases': [], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/57659/'], '@type': ['Target', 'Item'], 'name': 'ZBTB4-human', 'label': 'ZBTB4', '@id': '/targets/ZBTB4-human/', 'title': 'ZBTB4 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': '28d0833e-e67a-4519-b4cb-9ecaf09ca243', 'status': 'released'} ZBTB4-human DNA formaldehyde 2022-01-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF434VSQ/, /files/ENCFF179VXV/, /files/ENCFF882LVZ/ 1417323177 ENCODE Processing Pipeline 30cbf87a8a19936be6d3b097132f60a0 https://www.encodeproject.org/files/ENCFF927CUF/@@download/ENCFF927CUF.bigWig released s3://encode-public/2020/05/14/1767ebb6-bfc8-4c02-8ac1-89e403f722ba/ENCFF927CUF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/05/14/1767ebb6-bfc8-4c02-8ac1-89e403f722ba/ENCFF927CUF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF811BTD bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR691IQB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'schema_version': '14', 'aliases': [], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/57659/'], '@type': ['Target', 'Item'], 'name': 'ZBTB4-human', 'label': 'ZBTB4', '@id': '/targets/ZBTB4-human/', 'title': 'ZBTB4 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': '28d0833e-e67a-4519-b4cb-9ecaf09ca243', 'status': 'released'} ZBTB4-human DNA formaldehyde 2022-01-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF880BEK/ 133897 ENCODE Processing Pipeline 2c1ef2102287827efebdcc1349153040 https://www.encodeproject.org/files/ENCFF811BTD/@@download/ENCFF811BTD.bigBed released s3://encode-public/2020/05/14/bd79d189-0be9-4443-af46-692799a97041/ENCFF811BTD.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/05/14/bd79d189-0be9-4443-af46-692799a97041/ENCFF811BTD.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF880BEK bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR691IQB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'schema_version': '14', 'aliases': [], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/57659/'], '@type': ['Target', 'Item'], 'name': 'ZBTB4-human', 'label': 'ZBTB4', '@id': '/targets/ZBTB4-human/', 'title': 'ZBTB4 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': '28d0833e-e67a-4519-b4cb-9ecaf09ca243', 'status': 'released'} ZBTB4-human DNA formaldehyde 2022-01-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF434VSQ/, /files/ENCFF179VXV/, /files/ENCFF356LFX/, /files/ENCFF882LVZ/ 37615 ENCODE Processing Pipeline 2e1f61bb2faf1cc626bd648f8fb0d470 https://www.encodeproject.org/files/ENCFF880BEK/@@download/ENCFF880BEK.bed.gz released s3://encode-public/2020/05/14/06b01441-c542-4861-bddc-4f53b9ea57fe/ENCFF880BEK.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/05/14/06b01441-c542-4861-bddc-4f53b9ea57fe/ENCFF880BEK.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF951WKU bigWig bigWig signal p-value GRCh38 ENCSR903MVU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'dbxrefs': ['FactorBook:MAZ'], 'aliases': ['michael-snyder:TS-1819'], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/4150/'], '@type': ['Target', 'Item'], 'label': 'MAZ', 'title': 'MAZ (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'a84519a6-5cb1-4e81-aeac-a2a79bb66a6f', 'schema_version': '14', 'name': 'MAZ-human', '@id': '/targets/MAZ-human/', 'status': 'released'} MAZ-human DNA formaldehyde 2020-08-03 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF837FLU/, /files/ENCFF511RNV/, /files/ENCFF914SQQ/ 1194604005 ENCODE Processing Pipeline be69f710448380c4649b191f547cd1c5 https://www.encodeproject.org/files/ENCFF951WKU/@@download/ENCFF951WKU.bigWig released s3://encode-public/2020/05/14/f7134317-ef0f-41b0-9dad-51261cbe4343/ENCFF951WKU.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/05/14/f7134317-ef0f-41b0-9dad-51261cbe4343/ENCFF951WKU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking ENCFF250FJC bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR903MVU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'dbxrefs': ['FactorBook:MAZ'], 'aliases': ['michael-snyder:TS-1819'], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/4150/'], '@type': ['Target', 'Item'], 'label': 'MAZ', 'title': 'MAZ (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'a84519a6-5cb1-4e81-aeac-a2a79bb66a6f', 'schema_version': '14', 'name': 'MAZ-human', '@id': '/targets/MAZ-human/', 'status': 'released'} MAZ-human DNA formaldehyde 2020-08-03 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF837FLU/, /files/ENCFF511RNV/, /files/ENCFF356LFX/, /files/ENCFF914SQQ/ 416225 ENCODE Processing Pipeline 04ae06e90566ea7070e243b46674fa14 https://www.encodeproject.org/files/ENCFF250FJC/@@download/ENCFF250FJC.bed.gz released s3://encode-public/2020/05/14/a9651ccf-6873-449c-b27b-c23811d690a1/ENCFF250FJC.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/05/14/a9651ccf-6873-449c-b27b-c23811d690a1/ENCFF250FJC.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking ENCFF453CES bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR903MVU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'dbxrefs': ['FactorBook:MAZ'], 'aliases': ['michael-snyder:TS-1819'], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/4150/'], '@type': ['Target', 'Item'], 'label': 'MAZ', 'title': 'MAZ (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'a84519a6-5cb1-4e81-aeac-a2a79bb66a6f', 'schema_version': '14', 'name': 'MAZ-human', '@id': '/targets/MAZ-human/', 'status': 'released'} MAZ-human DNA formaldehyde 2020-08-03 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF250FJC/ 818854 ENCODE Processing Pipeline ebafa1ef8d16e6b6b1e122252c4b97a5 https://www.encodeproject.org/files/ENCFF453CES/@@download/ENCFF453CES.bigBed released s3://encode-public/2020/05/14/8493ab33-07bb-4f1a-8cab-5bb375e7fe25/ENCFF453CES.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/05/14/8493ab33-07bb-4f1a-8cab-5bb375e7fe25/ENCFF453CES.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking ENCFF098ABL bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF029PAA/ 204374 ENCODE Processing Pipeline 4e88e62a6c4abd862b262eff902eb610 https://www.encodeproject.org/files/ENCFF098ABL/@@download/ENCFF098ABL.bigBed released s3://encode-public/2021/01/08/0808e202-a82e-43f3-b16c-8ad140c550cf/ENCFF098ABL.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/0808e202-a82e-43f3-b16c-8ad140c550cf/ENCFF098ABL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF430WYI bigWig bigWig signal p-value GRCh38 ENCSR000DZV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF226YHB/, /files/ENCFF042LWY/, /files/ENCFF278NPZ/, /files/ENCFF323QPE/, /files/ENCFF683ICJ/, /files/ENCFF863XTX/ 661867084 ENCODE Processing Pipeline 1d63434a836e6a5b0c5eb33a7914b87e https://www.encodeproject.org/files/ENCFF430WYI/@@download/ENCFF430WYI.bigWig released s3://encode-public/2021/01/08/c4e510cc-9bfe-4664-a4db-09bf7a85baca/ENCFF430WYI.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/c4e510cc-9bfe-4664-a4db-09bf7a85baca/ENCFF430WYI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF029PAA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF226YHB/, /files/ENCFF042LWY/, /files/ENCFF278NPZ/, /files/ENCFF323QPE/, /files/ENCFF356LFX/, /files/ENCFF683ICJ/, /files/ENCFF863XTX/ 77215 ENCODE Processing Pipeline 6b8c2a2a3308bcf920a0aefd7379018b https://www.encodeproject.org/files/ENCFF029PAA/@@download/ENCFF029PAA.bed.gz released s3://encode-public/2021/01/08/df28f8b1-8e8b-4655-bbc8-509d3a4a96be/ENCFF029PAA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/df28f8b1-8e8b-4655-bbc8-509d3a4a96be/ENCFF029PAA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF411LJR bigWig bigWig signal p-value GRCh38 ENCSR000DZG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF683ICJ/, /files/ENCFF617MKT/, /files/ENCFF658PBP/, /files/ENCFF908KIL/ 554933500 ENCODE Processing Pipeline 9f907bee1ab311d80d11be15de916648 https://www.encodeproject.org/files/ENCFF411LJR/@@download/ENCFF411LJR.bigWig released s3://encode-public/2021/01/08/db7b16b0-be02-4558-8822-84805f1b47a1/ENCFF411LJR.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/db7b16b0-be02-4558-8822-84805f1b47a1/ENCFF411LJR.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, borderline replicate concordance, low read depth control insufficient read depth ENCFF926AKK bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF683ICJ/, /files/ENCFF617MKT/, /files/ENCFF658PBP/, /files/ENCFF908KIL/, /files/ENCFF356LFX/ 358373 ENCODE Processing Pipeline 84451db4ff5d07f36a72061f44800d33 https://www.encodeproject.org/files/ENCFF926AKK/@@download/ENCFF926AKK.bed.gz released s3://encode-public/2021/01/08/71dc9c3f-5739-4e54-9567-f6d84efd5443/ENCFF926AKK.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/71dc9c3f-5739-4e54-9567-f6d84efd5443/ENCFF926AKK.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, borderline replicate concordance, low read depth control insufficient read depth ENCFF039QRE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF926AKK/ 636825 ENCODE Processing Pipeline 921f4c64ff1dd0f267366a64aefc83d2 https://www.encodeproject.org/files/ENCFF039QRE/@@download/ENCFF039QRE.bigBed released s3://encode-public/2021/01/08/870a5ca6-fee8-47a8-8d34-1a73fc9016a7/ENCFF039QRE.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/870a5ca6-fee8-47a8-8d34-1a73fc9016a7/ENCFF039QRE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, borderline replicate concordance, low read depth control insufficient read depth ENCFF305UIB bigWig bigWig signal p-value GRCh38 ENCSR000BJY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF373EUJ/, /files/ENCFF447BVE/, /files/ENCFF554UVL/ 517748328 ENCODE Processing Pipeline 0f8ad6964c1ccfa8bd5f787d7f9e01c9 https://www.encodeproject.org/files/ENCFF305UIB/@@download/ENCFF305UIB.bigWig released s3://encode-public/2020/12/12/addfaf24-0861-4906-9cdd-9e551e27dd55/ENCFF305UIB.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/12/addfaf24-0861-4906-9cdd-9e551e27dd55/ENCFF305UIB.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking extremely low read depth ENCFF882AEU bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BJY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF373EUJ/, /files/ENCFF447BVE/, /files/ENCFF554UVL/, /files/ENCFF356LFX/ 71669 ENCODE Processing Pipeline 040bd9343f7a30bef6470a65cdb5ec45 https://www.encodeproject.org/files/ENCFF882AEU/@@download/ENCFF882AEU.bed.gz released s3://encode-public/2020/12/12/97e501be-2f07-4412-b72a-fc7a1657b92a/ENCFF882AEU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/12/97e501be-2f07-4412-b72a-fc7a1657b92a/ENCFF882AEU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking extremely low read depth ENCFF358BXK bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BJY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF882AEU/ 182751 ENCODE Processing Pipeline f7c0364a52531cc2557c571084eb5d0d https://www.encodeproject.org/files/ENCFF358BXK/@@download/ENCFF358BXK.bigBed released s3://encode-public/2020/12/12/645c3a35-897b-400e-aef2-5c626820b7c1/ENCFF358BXK.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/12/645c3a35-897b-400e-aef2-5c626820b7c1/ENCFF358BXK.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking extremely low read depth ENCFF906RAB bigWig bigWig signal p-value GRCh38 ENCSR000DZX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF683ICJ/, /files/ENCFF042LWY/, /files/ENCFF605SWO/, /files/ENCFF863XTX/, /files/ENCFF764MTX/ 533844642 ENCODE Processing Pipeline ceae4f414cc416c03f0385b0137069b8 https://www.encodeproject.org/files/ENCFF906RAB/@@download/ENCFF906RAB.bigWig released s3://encode-public/2021/01/07/bfe40a0f-7bd6-4a78-a701-25a64e75c492/ENCFF906RAB.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/07/bfe40a0f-7bd6-4a78-a701-25a64e75c492/ENCFF906RAB.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment, low read depth ENCFF785MSW bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF683ICJ/, /files/ENCFF042LWY/, /files/ENCFF356LFX/, /files/ENCFF605SWO/, /files/ENCFF863XTX/, /files/ENCFF764MTX/ 36162 ENCODE Processing Pipeline 47abe46fac595052624d1515b3740696 https://www.encodeproject.org/files/ENCFF785MSW/@@download/ENCFF785MSW.bed.gz released s3://encode-public/2021/01/07/3f2e2a3d-4d25-4fee-ac04-bd5961dc97db/ENCFF785MSW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/07/3f2e2a3d-4d25-4fee-ac04-bd5961dc97db/ENCFF785MSW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment, low read depth ENCFF530XSI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF785MSW/ 116092 ENCODE Processing Pipeline f901fc23968cfec55b8bc9487ca14bc7 https://www.encodeproject.org/files/ENCFF530XSI/@@download/ENCFF530XSI.bigBed released s3://encode-public/2021/01/07/1a4a4112-f9c8-4b9c-877e-9cfb1964a50e/ENCFF530XSI.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/07/1a4a4112-f9c8-4b9c-877e-9cfb1964a50e/ENCFF530XSI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment, low read depth ENCFF157HQD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR748SQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'schema_version': '14', 'aliases': ['michael-snyder:TS-1112'], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/63977/'], '@type': ['Target', 'Item'], 'name': 'PRDM15-human', 'label': 'PRDM15', '@id': '/targets/PRDM15-human/', 'title': 'PRDM15 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'f055571b-35dc-42c2-b04f-7f0429bba36e', 'status': 'released'} PRDM15-human DNA formaldehyde 2020-08-03 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF814BPN/, /files/ENCFF669ARL/, /files/ENCFF356LFX/, /files/ENCFF516IBY/ 34823 ENCODE Processing Pipeline 92eb8ccfa601c06d7d99b42e8547d60d https://www.encodeproject.org/files/ENCFF157HQD/@@download/ENCFF157HQD.bed.gz released s3://encode-public/2020/05/14/b78609f3-50dc-4872-9dc1-898b46373ec7/ENCFF157HQD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/05/14/b78609f3-50dc-4872-9dc1-898b46373ec7/ENCFF157HQD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF951QVH bigWig bigWig signal p-value GRCh38 ENCSR748SQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'schema_version': '14', 'aliases': ['michael-snyder:TS-1112'], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/63977/'], '@type': ['Target', 'Item'], 'name': 'PRDM15-human', 'label': 'PRDM15', '@id': '/targets/PRDM15-human/', 'title': 'PRDM15 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'f055571b-35dc-42c2-b04f-7f0429bba36e', 'status': 'released'} PRDM15-human DNA formaldehyde 2020-08-03 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF814BPN/, /files/ENCFF669ARL/, /files/ENCFF516IBY/ 1425682408 ENCODE Processing Pipeline 05e39ebf72b8dfb7fb4758d72444ec8e https://www.encodeproject.org/files/ENCFF951QVH/@@download/ENCFF951QVH.bigWig released s3://encode-public/2020/05/14/931199e2-2a68-4918-80c3-67bc2e88b0bf/ENCFF951QVH.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/05/14/931199e2-2a68-4918-80c3-67bc2e88b0bf/ENCFF951QVH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF445SXY bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR748SQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'schema_version': '14', 'aliases': ['michael-snyder:TS-1112'], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/63977/'], '@type': ['Target', 'Item'], 'name': 'PRDM15-human', 'label': 'PRDM15', '@id': '/targets/PRDM15-human/', 'title': 'PRDM15 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'f055571b-35dc-42c2-b04f-7f0429bba36e', 'status': 'released'} PRDM15-human DNA formaldehyde 2020-08-03 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF157HQD/ 128616 ENCODE Processing Pipeline fb578917bf6a772e0c9445723a699081 https://www.encodeproject.org/files/ENCFF445SXY/@@download/ENCFF445SXY.bigBed released s3://encode-public/2020/05/14/cbafefc5-2771-4ac7-9096-4defe54a735a/ENCFF445SXY.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/05/14/cbafefc5-2771-4ac7-9096-4defe54a735a/ENCFF445SXY.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.4.0 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF601WHE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RFX5-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF071BUP/, /files/ENCFF042LWY/, /files/ENCFF683ICJ/, /files/ENCFF509RPI/, /files/ENCFF356LFX/, /files/ENCFF278NPZ/ 108982 ENCODE Processing Pipeline f880bb724a2c733692d05e2d5ba117a0 https://www.encodeproject.org/files/ENCFF601WHE/@@download/ENCFF601WHE.bed.gz released s3://encode-public/2021/01/08/f80718ac-f06d-4909-9b0e-b16b452aefdc/ENCFF601WHE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/f80718ac-f06d-4909-9b0e-b16b452aefdc/ENCFF601WHE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF031WDM bigWig bigWig signal p-value GRCh38 ENCSR000DZW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RFX5-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF071BUP/, /files/ENCFF042LWY/, /files/ENCFF683ICJ/, /files/ENCFF509RPI/, /files/ENCFF278NPZ/ 696530106 ENCODE Processing Pipeline 786f2df81243cbee2a223ba51fc6f1dc https://www.encodeproject.org/files/ENCFF031WDM/@@download/ENCFF031WDM.bigWig released s3://encode-public/2021/01/08/6fdf5fd2-896d-48de-93ec-6e6e13273f2a/ENCFF031WDM.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/6fdf5fd2-896d-48de-93ec-6e6e13273f2a/ENCFF031WDM.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF768MIX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RFX5-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF601WHE/ 224928 ENCODE Processing Pipeline 1682785aa226aa3959496c50bf27ad11 https://www.encodeproject.org/files/ENCFF768MIX/@@download/ENCFF768MIX.bigBed released s3://encode-public/2021/01/08/00bff49f-49d9-468d-a728-e2c67f474bf8/ENCFF768MIX.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/00bff49f-49d9-468d-a728-e2c67f474bf8/ENCFF768MIX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF973FKS bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF2-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF339NUH/, /files/ENCFF305BPN/, /files/ENCFF356LFX/, /files/ENCFF856BLZ/, /files/ENCFF691UEA/, /files/ENCFF463JZL/ 477500 ENCODE Processing Pipeline 3fbcdf35e8c83d557eca5172716f4dee https://www.encodeproject.org/files/ENCFF973FKS/@@download/ENCFF973FKS.bed.gz released s3://encode-public/2020/12/26/ff14552a-c47f-4e2f-b604-0fd64253d128/ENCFF973FKS.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/ff14552a-c47f-4e2f-b604-0fd64253d128/ENCFF973FKS.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF396FJF bigWig bigWig signal p-value GRCh38 ENCSR000BQK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF2-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF339NUH/, /files/ENCFF305BPN/, /files/ENCFF856BLZ/, /files/ENCFF691UEA/, /files/ENCFF463JZL/ 1310520071 ENCODE Processing Pipeline 23a01cbfb82710dab783c66dbb0a9444 https://www.encodeproject.org/files/ENCFF396FJF/@@download/ENCFF396FJF.bigWig released s3://encode-public/2020/12/26/1015373a-f6c5-4101-b533-7aeb1c18452b/ENCFF396FJF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/1015373a-f6c5-4101-b533-7aeb1c18452b/ENCFF396FJF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF521LQJ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF2-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF973FKS/ 945659 ENCODE Processing Pipeline fc15237a53b4d0c6c0e49d960e58e125 https://www.encodeproject.org/files/ENCFF521LQJ/@@download/ENCFF521LQJ.bigBed released s3://encode-public/2020/12/26/42752eb6-ae82-486e-b8e9-ecd23488b556/ENCFF521LQJ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/42752eb6-ae82-486e-b8e9-ecd23488b556/ENCFF521LQJ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF775OOS bigWig bigWig signal p-value GRCh38 ENCSR000DZP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMC3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF042LWY/, /files/ENCFF622ERY/, /files/ENCFF302PYC/, /files/ENCFF863XTX/, /files/ENCFF278NPZ/ 723147976 ENCODE Processing Pipeline c228a119e7a32b34a13b702b73a15999 https://www.encodeproject.org/files/ENCFF775OOS/@@download/ENCFF775OOS.bigWig released s3://encode-public/2021/01/08/094d4b4a-5246-4697-9e84-b59dbfedcd70/ENCFF775OOS.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/094d4b4a-5246-4697-9e84-b59dbfedcd70/ENCFF775OOS.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance ENCFF837YJA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMC3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF042LWY/, /files/ENCFF356LFX/, /files/ENCFF622ERY/, /files/ENCFF302PYC/, /files/ENCFF863XTX/, /files/ENCFF278NPZ/ 590144 ENCODE Processing Pipeline 2a28a7ccbb3b9461072b165af550d2bf https://www.encodeproject.org/files/ENCFF837YJA/@@download/ENCFF837YJA.bed.gz released s3://encode-public/2021/01/08/c0190f8d-da07-46a0-9e9a-0a3c8c416ad0/ENCFF837YJA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/c0190f8d-da07-46a0-9e9a-0a3c8c416ad0/ENCFF837YJA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance ENCFF085RLZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMC3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF837YJA/ 1058860 ENCODE Processing Pipeline 4b8610057b48946caecc25ba5cae4414 https://www.encodeproject.org/files/ENCFF085RLZ/@@download/ENCFF085RLZ.bigBed released s3://encode-public/2021/01/08/36085c71-be55-4fd8-a264-d75bffb0058f/ENCFF085RLZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/36085c71-be55-4fd8-a264-d75bffb0058f/ENCFF085RLZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance ENCFF258UEW bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EUM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YY1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF301QON/, /files/ENCFF493HLV/, /files/ENCFF356LFX/ 38075 ENCODE Processing Pipeline 1ee615e3ed89c5f93740a2f54552ec45 https://www.encodeproject.org/files/ENCFF258UEW/@@download/ENCFF258UEW.bed.gz released s3://encode-public/2021/02/11/d7e6173b-4250-477a-a374-85dee2de560a/ENCFF258UEW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/11/d7e6173b-4250-477a-a374-85dee2de560a/ENCFF258UEW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.7.0 GRCh38 released insufficient read depth, insufficient read length, control insufficient read depth extremely low read depth ENCFF150EFU bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EUM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YY1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF258UEW/ 117805 ENCODE Processing Pipeline 71e38694baa88d9d794180dc0f192914 https://www.encodeproject.org/files/ENCFF150EFU/@@download/ENCFF150EFU.bigBed released s3://encode-public/2021/02/11/0a4e6af5-c8de-4457-9774-f21f73eb11c7/ENCFF150EFU.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/11/0a4e6af5-c8de-4457-9774-f21f73eb11c7/ENCFF150EFU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.7.0 GRCh38 released insufficient read depth, insufficient read length, control insufficient read depth extremely low read depth ENCFF658JIE bigWig bigWig signal p-value GRCh38 ENCSR000EUM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YY1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF301QON/, /files/ENCFF493HLV/ 197479261 ENCODE Processing Pipeline 8deeb718553f2cdcf31b57fc0cc3df3f https://www.encodeproject.org/files/ENCFF658JIE/@@download/ENCFF658JIE.bigWig released s3://encode-public/2021/02/11/884dcea2-3efb-4b19-b016-ca9e95e685e7/ENCFF658JIE.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/11/884dcea2-3efb-4b19-b016-ca9e95e685e7/ENCFF658JIE.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.7.0 GRCh38 released insufficient read depth, insufficient read length, control insufficient read depth extremely low read depth ENCFF960CUQ bigWig bigWig signal p-value GRCh38 ENCSR000BHC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB33-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF032KSZ/, /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF441UOY/ 922655011 ENCODE Processing Pipeline 95cecb28bee6bc46f77667486dbc18e4 https://www.encodeproject.org/files/ENCFF960CUQ/@@download/ENCFF960CUQ.bigWig released s3://encode-public/2020/12/10/368b0f4b-7ec4-499f-8773-403e396b6a2c/ENCFF960CUQ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/10/368b0f4b-7ec4-499f-8773-403e396b6a2c/ENCFF960CUQ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF917XFN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB33-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF032KSZ/, /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF441UOY/ 44993 ENCODE Processing Pipeline a5d6470b10207be1ecf56223ca10c8e2 https://www.encodeproject.org/files/ENCFF917XFN/@@download/ENCFF917XFN.bed.gz released s3://encode-public/2020/12/10/2616be8a-2fc7-4e58-a7b5-b8843be22b97/ENCFF917XFN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/10/2616be8a-2fc7-4e58-a7b5-b8843be22b97/ENCFF917XFN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF024ZOE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB33-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF917XFN/ 113594 ENCODE Processing Pipeline 4012048461967db2c006897e15634114 https://www.encodeproject.org/files/ENCFF024ZOE/@@download/ENCFF024ZOE.bigBed released s3://encode-public/2020/12/10/11446ed8-57e0-4030-a6ca-20b433849bd6/ENCFF024ZOE.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/10/11446ed8-57e0-4030-a6ca-20b433849bd6/ENCFF024ZOE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF038TLO bigWig bigWig signal p-value GRCh38 ENCSR822AHX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF2-human DNA 2017-06-23 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF987HMW/, /files/ENCFF985GXC/, /files/ENCFF377KFK/ 2172119118 ENCODE Processing Pipeline 09fd7890e85bc9b55ef7be502ae132cf https://www.encodeproject.org/files/ENCFF038TLO/@@download/ENCFF038TLO.bigWig released s3://encode-public/2020/12/01/0c74d0cb-3a42-496a-84a0-61c022ac415f/ENCFF038TLO.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/0c74d0cb-3a42-496a-84a0-61c022ac415f/ENCFF038TLO.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF238LYK bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR822AHX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF2-human DNA 2017-06-23 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF511HZB/ 2081229 ENCODE Processing Pipeline 1e469b846aad2e9ebaad0cf94004f071 https://www.encodeproject.org/files/ENCFF238LYK/@@download/ENCFF238LYK.bigBed released s3://encode-public/2020/12/01/47916d11-9d6f-47c6-b21c-016bb6f6334e/ENCFF238LYK.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/47916d11-9d6f-47c6-b21c-016bb6f6334e/ENCFF238LYK.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF511HZB bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR822AHX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF2-human DNA 2017-06-23 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF985GXC/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF987HMW/ 1002370 ENCODE Processing Pipeline 0ce35eb189b81c91052e5487abf25f26 https://www.encodeproject.org/files/ENCFF511HZB/@@download/ENCFF511HZB.bed.gz released s3://encode-public/2020/12/01/8a877bec-dcc7-4198-845b-31636bd67ed5/ENCFF511HZB.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/8a877bec-dcc7-4198-845b-31636bd67ed5/ENCFF511HZB.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF167KPF bigWig bigWig signal p-value GRCh38 ENCSR000BGY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF4-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF700SGU/, /files/ENCFF948MVT/, /files/ENCFF882OBA/, /files/ENCFF075XYL/, /files/ENCFF519KIS/ 937543354 ENCODE Processing Pipeline 672e65a88475e6930181863b8c56c34c https://www.encodeproject.org/files/ENCFF167KPF/@@download/ENCFF167KPF.bigWig released s3://encode-public/2020/12/28/81b07212-b897-4184-afcc-7c16d6ee73d8/ENCFF167KPF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/28/81b07212-b897-4184-afcc-7c16d6ee73d8/ENCFF167KPF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF769ZDL bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF4-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF113VGD/ 679200 ENCODE Processing Pipeline 492ecf42acb27234603d7e827a06dbd1 https://www.encodeproject.org/files/ENCFF769ZDL/@@download/ENCFF769ZDL.bigBed released s3://encode-public/2020/12/28/88aaacf2-0d9c-440d-9e6d-73c66095762a/ENCFF769ZDL.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/28/88aaacf2-0d9c-440d-9e6d-73c66095762a/ENCFF769ZDL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF113VGD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF4-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF700SGU/, /files/ENCFF948MVT/, /files/ENCFF882OBA/, /files/ENCFF075XYL/, /files/ENCFF519KIS/ 370488 ENCODE Processing Pipeline 4ba9d08ecd621659aae15735967dfd58 https://www.encodeproject.org/files/ENCFF113VGD/@@download/ENCFF113VGD.bed.gz released s3://encode-public/2020/12/28/1eb14bcf-623e-4d38-a8cf-16c6a72f54c3/ENCFF113VGD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/28/1eb14bcf-623e-4d38-a8cf-16c6a72f54c3/ENCFF113VGD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF558WOU bigWig bigWig signal p-value GRCh38 ENCSR874AFU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF775UOU/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF245USW/ 2012670936 ENCODE Processing Pipeline d44e277c635cce43b46f5f697be0485b https://www.encodeproject.org/files/ENCFF558WOU/@@download/ENCFF558WOU.bigWig released s3://encode-public/2020/12/03/09d7eee2-19cf-4555-ab34-6dcb3a88097a/ENCFF558WOU.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/09d7eee2-19cf-4555-ab34-6dcb3a88097a/ENCFF558WOU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF819VMH bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR874AFU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF775UOU/, /files/ENCFF356LFX/, /files/ENCFF377KFK/, /files/ENCFF245USW/ 1311547 ENCODE Processing Pipeline 877090c0bddaa41435cec5df194a95c2 https://www.encodeproject.org/files/ENCFF819VMH/@@download/ENCFF819VMH.bed.gz released s3://encode-public/2020/12/03/1452d8d7-29c1-43cc-b0b7-60549b875194/ENCFF819VMH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/1452d8d7-29c1-43cc-b0b7-60549b875194/ENCFF819VMH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF753XDO bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR874AFU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF819VMH/ 2635664 ENCODE Processing Pipeline 20924ae57faa4bcd2f1f4a7ff60ef144 https://www.encodeproject.org/files/ENCFF753XDO/@@download/ENCFF753XDO.bigBed released s3://encode-public/2020/12/03/9efb2ab4-18c2-405e-ae7e-2810a5abd03c/ENCFF753XDO.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/9efb2ab4-18c2-405e-ae7e-2810a5abd03c/ENCFF753XDO.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF105GUZ bigWig bigWig signal p-value GRCh38 ENCSR542FLV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB33-human DNA 2017-11-13 ENCODE 450-650 1, 4 1_1, 4_1 /files/ENCFF739ZTJ/, /files/ENCFF783FZL/, /files/ENCFF729RNB/, /files/ENCFF526WYZ/ 2014480966 ENCODE Processing Pipeline bdcb226c6e0333e973057e2619a41078 https://www.encodeproject.org/files/ENCFF105GUZ/@@download/ENCFF105GUZ.bigWig released s3://encode-public/2020/12/04/9f8a3697-6302-4ccd-8778-dda60ddda075/ENCFF105GUZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/9f8a3697-6302-4ccd-8778-dda60ddda075/ENCFF105GUZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF845VSZ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR542FLV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB33-human DNA 2017-11-13 ENCODE 450-650 1, 4 1_1, 4_1 /files/ENCFF356LFX/, /files/ENCFF739ZTJ/, /files/ENCFF526WYZ/, /files/ENCFF783FZL/, /files/ENCFF729RNB/ 121296 ENCODE Processing Pipeline ee6ef049eaf8ab6e8e940da960098b16 https://www.encodeproject.org/files/ENCFF845VSZ/@@download/ENCFF845VSZ.bed.gz released s3://encode-public/2020/12/04/6e404503-37b7-433b-b216-b1cbc9f8efb7/ENCFF845VSZ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/6e404503-37b7-433b-b216-b1cbc9f8efb7/ENCFF845VSZ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF818EFA bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR542FLV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB33-human DNA 2017-11-13 ENCODE 450-650 1, 4 1_1, 4_1 /files/ENCFF845VSZ/ 282283 ENCODE Processing Pipeline a17014fdef760fd02930e625eb25ee74 https://www.encodeproject.org/files/ENCFF818EFA/@@download/ENCFF818EFA.bigBed released s3://encode-public/2020/12/04/548d0726-67e9-4e50-9eca-bf3091680d53/ENCFF818EFA.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/548d0726-67e9-4e50-9eca-bf3091680d53/ENCFF818EFA.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF969WXQ bigWig bigWig signal p-value GRCh38 ENCSR552XSN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MLLT1-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF777FAN/, /files/ENCFF629AMY/, /files/ENCFF526WYZ/, /files/ENCFF783FZL/ 2000088367 ENCODE Processing Pipeline 9030d6f920b3f9b5a20181d43f7cd8c2 https://www.encodeproject.org/files/ENCFF969WXQ/@@download/ENCFF969WXQ.bigWig released s3://encode-public/2020/12/03/f5e3f40e-64af-44c9-8013-c27151d4e35e/ENCFF969WXQ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/f5e3f40e-64af-44c9-8013-c27151d4e35e/ENCFF969WXQ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF995GXC bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR552XSN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MLLT1-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF652GOE/ 1577626 ENCODE Processing Pipeline be5753ad88e1d7c32e6f69a4e3e2248a https://www.encodeproject.org/files/ENCFF995GXC/@@download/ENCFF995GXC.bigBed released s3://encode-public/2020/12/03/ddf17d1c-bbf2-4b0d-8f1b-4d72a8fa67bd/ENCFF995GXC.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/ddf17d1c-bbf2-4b0d-8f1b-4d72a8fa67bd/ENCFF995GXC.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF652GOE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR552XSN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MLLT1-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF629AMY/, /files/ENCFF526WYZ/, /files/ENCFF783FZL/, /files/ENCFF777FAN/ 820742 ENCODE Processing Pipeline 1770695af7732bf82eec0104afb7e607 https://www.encodeproject.org/files/ENCFF652GOE/@@download/ENCFF652GOE.bed.gz released s3://encode-public/2020/12/03/bed942dd-d73f-482d-8fc5-041afe0e44ae/ENCFF652GOE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/bed942dd-d73f-482d-8fc5-041afe0e44ae/ENCFF652GOE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF965NQQ bigWig bigWig signal p-value GRCh38 ENCSR897MMC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUNB-human DNA 2016-06-13 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF213HNC/, /files/ENCFF566JBZ/, /files/ENCFF580TLU/, /files/ENCFF654VKA/ 1331765403 ENCODE Processing Pipeline d138c317fef531170baffdb6a3c06acc https://www.encodeproject.org/files/ENCFF965NQQ/@@download/ENCFF965NQQ.bigWig released s3://encode-public/2021/02/04/72730123-4f6c-4812-93d7-e873929f481d/ENCFF965NQQ.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/72730123-4f6c-4812-93d7-e873929f481d/ENCFF965NQQ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF912OPT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR897MMC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUNB-human DNA 2016-06-13 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF213HNC/, /files/ENCFF356LFX/, /files/ENCFF566JBZ/, /files/ENCFF654VKA/, /files/ENCFF580TLU/ 607564 ENCODE Processing Pipeline ae13391085b4923f09f371eb3024a00d https://www.encodeproject.org/files/ENCFF912OPT/@@download/ENCFF912OPT.bed.gz released s3://encode-public/2021/02/04/029e4e93-66f1-408e-b032-b4dfdea9855a/ENCFF912OPT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/029e4e93-66f1-408e-b032-b4dfdea9855a/ENCFF912OPT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF667EJQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR897MMC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUNB-human DNA 2016-06-13 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF912OPT/ 1257320 ENCODE Processing Pipeline 286a642ebd2f58a64e236bbf1270ae07 https://www.encodeproject.org/files/ENCFF667EJQ/@@download/ENCFF667EJQ.bigBed released s3://encode-public/2021/02/04/cf33927c-c7a7-4265-9875-6c3fb09c80ea/ENCFF667EJQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/cf33927c-c7a7-4265-9875-6c3fb09c80ea/ENCFF667EJQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF857YLX bigWig bigWig signal p-value GRCh38 ENCSR000BRI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RUNX3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF305BPN/, /files/ENCFF339NUH/, /files/ENCFF842LUH/, /files/ENCFF691UEA/, /files/ENCFF453BWG/ 1295552173 ENCODE Processing Pipeline 9ba4563c9178105247969516ec863737 https://www.encodeproject.org/files/ENCFF857YLX/@@download/ENCFF857YLX.bigWig released s3://encode-public/2020/12/27/1c4f9cba-494f-4bcf-b749-b9cc69d20b5e/ENCFF857YLX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/1c4f9cba-494f-4bcf-b749-b9cc69d20b5e/ENCFF857YLX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF346JDW bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RUNX3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF305BPN/, /files/ENCFF339NUH/, /files/ENCFF842LUH/, /files/ENCFF691UEA/, /files/ENCFF356LFX/, /files/ENCFF453BWG/ 1253220 ENCODE Processing Pipeline bd42860f9067e3e77f4b9fdf8e4e7abb https://www.encodeproject.org/files/ENCFF346JDW/@@download/ENCFF346JDW.bed.gz released s3://encode-public/2020/12/27/4ffe1f62-cc8f-430a-8fb9-9308328eda36/ENCFF346JDW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/4ffe1f62-cc8f-430a-8fb9-9308328eda36/ENCFF346JDW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF395WHA bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RUNX3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF346JDW/ 2312671 ENCODE Processing Pipeline 4122315431ef0c6da670c333e5801f2a https://www.encodeproject.org/files/ENCFF395WHA/@@download/ENCFF395WHA.bigBed released s3://encode-public/2020/12/27/732eb113-2f24-4f39-be54-81b9b67d0219/ENCFF395WHA.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/732eb113-2f24-4f39-be54-81b9b67d0219/ENCFF395WHA.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF493ANJ bigWig bigWig signal p-value GRCh38 ENCSR192AFN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX8-human DNA 2017-11-30 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF479AFG/, /files/ENCFF077YQF/ 2034758245 ENCODE Processing Pipeline 9ae6140dfa286c96cdfa4d4c98eb2dfa https://www.encodeproject.org/files/ENCFF493ANJ/@@download/ENCFF493ANJ.bigWig released s3://encode-public/2020/11/28/910df9a4-0edd-47f8-bb84-d911a38204dd/ENCFF493ANJ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/28/910df9a4-0edd-47f8-bb84-d911a38204dd/ENCFF493ANJ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF934NVD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR192AFN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX8-human DNA 2017-11-30 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF077YQF/, /files/ENCFF356LFX/, /files/ENCFF377KFK/, /files/ENCFF479AFG/ 58602 ENCODE Processing Pipeline d22ab3828ef5eb15e69829da2b78b295 https://www.encodeproject.org/files/ENCFF934NVD/@@download/ENCFF934NVD.bed.gz released s3://encode-public/2020/11/28/2869c8d0-b5d3-44e4-8c0d-ff379c3f3d50/ENCFF934NVD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/28/2869c8d0-b5d3-44e4-8c0d-ff379c3f3d50/ENCFF934NVD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF033MGF bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR192AFN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX8-human DNA 2017-11-30 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF934NVD/ 169463 ENCODE Processing Pipeline 85e1a9e1d587a901f4004c55c4037d33 https://www.encodeproject.org/files/ENCFF033MGF/@@download/ENCFF033MGF.bigBed released s3://encode-public/2020/11/28/cd735069-5faf-4789-8a8a-778110fdbdfd/ENCFF033MGF.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/28/cd735069-5faf-4789-8a8a-778110fdbdfd/ENCFF033MGF.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF936FAN bigWig bigWig signal p-value GRCh38 ENCSR387QUV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RELB-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF408PTC/, /files/ENCFF783FZL/, /files/ENCFF942QFU/, /files/ENCFF526WYZ/ 1797458943 ENCODE Processing Pipeline b27184164240fa2b763a37ffccd41cb1 https://www.encodeproject.org/files/ENCFF936FAN/@@download/ENCFF936FAN.bigWig released s3://encode-public/2020/11/27/7042e181-43d8-43f5-9cba-ce224ce6e146/ENCFF936FAN.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/27/7042e181-43d8-43f5-9cba-ce224ce6e146/ENCFF936FAN.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF217ADF bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR387QUV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RELB-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF968MBN/ 1703363 ENCODE Processing Pipeline 423f2531fb3873baf352fb9f8dd4d5d0 https://www.encodeproject.org/files/ENCFF217ADF/@@download/ENCFF217ADF.bigBed released s3://encode-public/2020/11/27/57a3317d-e24e-4e1e-9e21-03821b346c10/ENCFF217ADF.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/27/57a3317d-e24e-4e1e-9e21-03821b346c10/ENCFF217ADF.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF968MBN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR387QUV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RELB-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF408PTC/, /files/ENCFF783FZL/, /files/ENCFF942QFU/, /files/ENCFF526WYZ/, /files/ENCFF356LFX/ 789842 ENCODE Processing Pipeline 4ea1c3b12532ef9a8282db5a37e75cd9 https://www.encodeproject.org/files/ENCFF968MBN/@@download/ENCFF968MBN.bed.gz released s3://encode-public/2020/11/27/1e1e54c1-2634-4895-a57f-295a345ae4b8/ENCFF968MBN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/27/1e1e54c1-2634-4895-a57f-295a345ae4b8/ENCFF968MBN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF578PIF bigWig bigWig signal p-value GRCh38 ENCSR739IHN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBX21-human DNA 2016-06-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF397LQT/, /files/ENCFF783FZL/, /files/ENCFF729JUC/, /files/ENCFF526WYZ/ 1690045178 ENCODE Processing Pipeline dd1f887fea0f22ea94c1b37888256fbb https://www.encodeproject.org/files/ENCFF578PIF/@@download/ENCFF578PIF.bigWig released s3://encode-public/2020/12/02/c034b8b2-15d4-41fa-a84a-9266155ded04/ENCFF578PIF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/c034b8b2-15d4-41fa-a84a-9266155ded04/ENCFF578PIF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF170IZO bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR739IHN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBX21-human DNA 2016-06-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF356LFX/, /files/ENCFF783FZL/, /files/ENCFF729JUC/, /files/ENCFF397LQT/ 686329 ENCODE Processing Pipeline 7c3b6ed2e877fe09d55450306e501ed6 https://www.encodeproject.org/files/ENCFF170IZO/@@download/ENCFF170IZO.bed.gz released s3://encode-public/2020/12/02/59426a4b-0cc7-426c-880b-3fb89643ef24/ENCFF170IZO.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/59426a4b-0cc7-426c-880b-3fb89643ef24/ENCFF170IZO.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF951HUW bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR739IHN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBX21-human DNA 2016-06-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF170IZO/ 1323549 ENCODE Processing Pipeline 04b34335f0edf4b17d2e71edd1b64439 https://www.encodeproject.org/files/ENCFF951HUW/@@download/ENCFF951HUW.bigBed released s3://encode-public/2020/12/02/c8e4635a-cd97-4756-b687-f300089fc009/ENCFF951HUW.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/c8e4635a-cd97-4756-b687-f300089fc009/ENCFF951HUW.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF010ZUU bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BHLHE40-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF633YUQ/ 1043329 ENCODE Processing Pipeline 329803f9c9bb5e4881a13e0eb98cfecf https://www.encodeproject.org/files/ENCFF010ZUU/@@download/ENCFF010ZUU.bigBed released s3://encode-public/2021/01/08/316df856-288f-4cf7-9f4a-23f9b398a760/ENCFF010ZUU.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/316df856-288f-4cf7-9f4a-23f9b398a760/ENCFF010ZUU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF325FDI bigWig bigWig signal p-value GRCh38 ENCSR000DZJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BHLHE40-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF863XTX/, /files/ENCFF278NPZ/, /files/ENCFF042LWY/, /files/ENCFF594ZIL/, /files/ENCFF947HBR/ 619029565 ENCODE Processing Pipeline 1a666222497c9492b3f672d867b69a57 https://www.encodeproject.org/files/ENCFF325FDI/@@download/ENCFF325FDI.bigWig released s3://encode-public/2021/01/08/8610f1f1-bfb6-433d-91bc-d6e202e51ab4/ENCFF325FDI.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/8610f1f1-bfb6-433d-91bc-d6e202e51ab4/ENCFF325FDI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF633YUQ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BHLHE40-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF863XTX/, /files/ENCFF278NPZ/, /files/ENCFF042LWY/, /files/ENCFF594ZIL/, /files/ENCFF356LFX/, /files/ENCFF947HBR/ 502289 ENCODE Processing Pipeline 83f8660a9ed7d3b129533a5e31b14d28 https://www.encodeproject.org/files/ENCFF633YUQ/@@download/ENCFF633YUQ.bed.gz released s3://encode-public/2021/01/08/d3d9d2d4-29ce-4488-a536-6a8ba1933303/ENCFF633YUQ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/d3d9d2d4-29ce-4488-a536-6a8ba1933303/ENCFF633YUQ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF419XBM bigWig bigWig signal p-value GRCh38 ENCSR000DYZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBL1XR1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF941TVG/, /files/ENCFF278NPZ/, /files/ENCFF389FAZ/, /files/ENCFF042LWY/ 789960759 ENCODE Processing Pipeline eba1f3229f60457c1373246243cc75d1 https://www.encodeproject.org/files/ENCFF419XBM/@@download/ENCFF419XBM.bigWig released s3://encode-public/2021/01/08/a60b1de2-0516-40a2-a869-ab1906b97ba3/ENCFF419XBM.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/a60b1de2-0516-40a2-a869-ab1906b97ba3/ENCFF419XBM.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF409FTM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBL1XR1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF276QRH/ 435866 ENCODE Processing Pipeline 6a313c2142e69ba5f8ea53af4280c04b https://www.encodeproject.org/files/ENCFF409FTM/@@download/ENCFF409FTM.bigBed released s3://encode-public/2021/01/08/921e8ed5-67e5-43a8-b561-ee70d9336645/ENCFF409FTM.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/921e8ed5-67e5-43a8-b561-ee70d9336645/ENCFF409FTM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF276QRH bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBL1XR1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF941TVG/, /files/ENCFF278NPZ/, /files/ENCFF389FAZ/, /files/ENCFF356LFX/, /files/ENCFF042LWY/ 232355 ENCODE Processing Pipeline f899991da625b25066263850bea82697 https://www.encodeproject.org/files/ENCFF276QRH/@@download/ENCFF276QRH.bed.gz released s3://encode-public/2021/01/08/3a69fb6e-a722-4cd7-b0f4-9ae8291966ab/ENCFF276QRH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/3a69fb6e-a722-4cd7-b0f4-9ae8291966ab/ENCFF276QRH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF606OSZ bigWig bigWig signal p-value GRCh38 ENCSR207PFI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBED1-human DNA 2016-02-05 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF067ROS/, /files/ENCFF052HUW/, /files/ENCFF116KZS/, /files/ENCFF264GVN/ 1095598140 ENCODE Processing Pipeline d01684e39e2c29e6646996114d5a1a5b https://www.encodeproject.org/files/ENCFF606OSZ/@@download/ENCFF606OSZ.bigWig released s3://encode-public/2020/12/08/447e8b46-98a3-4442-a795-a88397d90b24/ENCFF606OSZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/08/447e8b46-98a3-4442-a795-a88397d90b24/ENCFF606OSZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF007OSW bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR207PFI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBED1-human DNA 2016-02-05 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF753UAX/ 551182 ENCODE Processing Pipeline e1dd50ab0b6535944da5a78a5aaf0b02 https://www.encodeproject.org/files/ENCFF007OSW/@@download/ENCFF007OSW.bigBed released s3://encode-public/2020/12/08/e9fcaf54-d2c2-4e4e-b5cb-e5737fc9c953/ENCFF007OSW.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/08/e9fcaf54-d2c2-4e4e-b5cb-e5737fc9c953/ENCFF007OSW.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF753UAX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR207PFI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBED1-human DNA 2016-02-05 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF067ROS/, /files/ENCFF052HUW/, /files/ENCFF264GVN/, /files/ENCFF356LFX/, /files/ENCFF116KZS/ 264077 ENCODE Processing Pipeline a44595963c0c6889b486715602e2173e https://www.encodeproject.org/files/ENCFF753UAX/@@download/ENCFF753UAX.bed.gz released s3://encode-public/2020/12/08/892da37e-1c43-4a38-989c-8fcd8ea90b07/ENCFF753UAX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/08/892da37e-1c43-4a38-989c-8fcd8ea90b07/ENCFF753UAX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF171OVM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR212YKD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SKIL-human DNA 2017-07-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF506SOD/ 1077381 ENCODE Processing Pipeline a27d980a680deb0cecae68f9d9773fe7 https://www.encodeproject.org/files/ENCFF171OVM/@@download/ENCFF171OVM.bigBed released s3://encode-public/2020/12/08/6caaec0d-dddb-4c52-bcfa-a11a872bcccb/ENCFF171OVM.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/08/6caaec0d-dddb-4c52-bcfa-a11a872bcccb/ENCFF171OVM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth poor library complexity, severe bottlenecking ENCFF846ERN bigWig bigWig signal p-value GRCh38 ENCSR212YKD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SKIL-human DNA 2017-07-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF093WMA/, /files/ENCFF377KFK/, /files/ENCFF817REH/, /files/ENCFF526WYZ/, /files/ENCFF232AKP/ 2583758139 ENCODE Processing Pipeline 9f37763b7cb15b479b03c258052d58a8 https://www.encodeproject.org/files/ENCFF846ERN/@@download/ENCFF846ERN.bigWig released s3://encode-public/2020/12/08/c6abe2f5-ecb7-49a9-af74-6d2a1f37caae/ENCFF846ERN.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/08/c6abe2f5-ecb7-49a9-af74-6d2a1f37caae/ENCFF846ERN.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth poor library complexity, severe bottlenecking ENCFF506SOD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR212YKD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SKIL-human DNA 2017-07-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF093WMA/, /files/ENCFF377KFK/, /files/ENCFF817REH/, /files/ENCFF356LFX/, /files/ENCFF526WYZ/, /files/ENCFF232AKP/ 458102 ENCODE Processing Pipeline cfa42c50093adc6f2ddfac4f5c281e9a https://www.encodeproject.org/files/ENCFF506SOD/@@download/ENCFF506SOD.bed.gz released s3://encode-public/2020/12/08/c332e8b7-d22c-400c-8bf9-6db681c6a40c/ENCFF506SOD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/08/c332e8b7-d22c-400c-8bf9-6db681c6a40c/ENCFF506SOD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth poor library complexity, severe bottlenecking ENCFF553ZPL bigWig bigWig signal p-value GRCh38 ENCSR000BND TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZEB1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF070VUK/, /files/ENCFF075XYL/, /files/ENCFF196DWF/, /files/ENCFF519KIS/, /files/ENCFF882OBA/ 756702868 ENCODE Processing Pipeline f2d8e7c20a687a2719c9593df126f1b8 https://www.encodeproject.org/files/ENCFF553ZPL/@@download/ENCFF553ZPL.bigWig released s3://encode-public/2020/12/28/641aae27-a085-492e-b56c-55f1405f4eef/ENCFF553ZPL.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/28/641aae27-a085-492e-b56c-55f1405f4eef/ENCFF553ZPL.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance insufficient read depth, severe bottlenecking, poor library complexity ENCFF703XCL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BND TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZEB1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF070VUK/, /files/ENCFF075XYL/, /files/ENCFF196DWF/, /files/ENCFF356LFX/, /files/ENCFF519KIS/, /files/ENCFF882OBA/ 126057 ENCODE Processing Pipeline c995f3a351d3dae8f0775c3eba84f9fe https://www.encodeproject.org/files/ENCFF703XCL/@@download/ENCFF703XCL.bed.gz released s3://encode-public/2020/12/28/d797919f-ad0f-4dec-8d33-1c9aff7636c3/ENCFF703XCL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/28/d797919f-ad0f-4dec-8d33-1c9aff7636c3/ENCFF703XCL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance insufficient read depth, severe bottlenecking, poor library complexity ENCFF148RLQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BND TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZEB1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF703XCL/ 243572 ENCODE Processing Pipeline ad59126e72bcd9529bd846ffce6d35ca https://www.encodeproject.org/files/ENCFF148RLQ/@@download/ENCFF148RLQ.bigBed released s3://encode-public/2020/12/28/99e1ce8f-f6f8-42a6-8e9d-958fdd821e18/ENCFF148RLQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/28/99e1ce8f-f6f8-42a6-8e9d-958fdd821e18/ENCFF148RLQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, borderline replicate concordance insufficient read depth, severe bottlenecking, poor library complexity ENCFF148RBX bigWig bigWig signal p-value GRCh38 ENCSR751CJG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD4-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF834ZDP/, /files/ENCFF556URJ/, /files/ENCFF218GCJ/, /files/ENCFF994WVU/, /files/ENCFF524BQP/, /files/ENCFF748NUK/ 2235807100 ENCODE Processing Pipeline b77f2f23d1cc0a50de2445d3d19cd010 https://www.encodeproject.org/files/ENCFF148RBX/@@download/ENCFF148RBX.bigWig released s3://encode-public/2020/12/03/cc0bbebf-a67e-4255-bee8-d3f0b86aa0cd/ENCFF148RBX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/cc0bbebf-a67e-4255-bee8-d3f0b86aa0cd/ENCFF148RBX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF403JIP bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR751CJG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD4-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF834ZDP/, /files/ENCFF556URJ/, /files/ENCFF218GCJ/, /files/ENCFF994WVU/, /files/ENCFF524BQP/, /files/ENCFF356LFX/, /files/ENCFF748NUK/ 21745 ENCODE Processing Pipeline 198baf0e4868a5559c8de451c9b27238 https://www.encodeproject.org/files/ENCFF403JIP/@@download/ENCFF403JIP.bed.gz released s3://encode-public/2020/12/03/dd90c1e2-0841-4eae-93dd-1474c3099262/ENCFF403JIP.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/dd90c1e2-0841-4eae-93dd-1474c3099262/ENCFF403JIP.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF962GSN bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR751CJG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD4-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF403JIP/ 102275 ENCODE Processing Pipeline 478954649c0e38be9315db2445e978c5 https://www.encodeproject.org/files/ENCFF962GSN/@@download/ENCFF962GSN.bigBed released s3://encode-public/2020/12/03/b68a68c4-5f95-4fff-beda-d94082c2fca3/ENCFF962GSN.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/b68a68c4-5f95-4fff-beda-d94082c2fca3/ENCFF962GSN.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF957SRJ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR293QAR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MTA2-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF121RRZ/, /files/ENCFF803UWC/, /files/ENCFF356LFX/, /files/ENCFF232AKP/ 816480 ENCODE Processing Pipeline 73b4c1da27283ff3f5c2192b44067f8b https://www.encodeproject.org/files/ENCFF957SRJ/@@download/ENCFF957SRJ.bed.gz released s3://encode-public/2021/02/04/b34654d8-c78a-4ba4-85f2-490bca83d4cb/ENCFF957SRJ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/b34654d8-c78a-4ba4-85f2-490bca83d4cb/ENCFF957SRJ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF615CWQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR293QAR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MTA2-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF957SRJ/ 1833225 ENCODE Processing Pipeline e6011abdde2168a2ab3ae6aff84ba831 https://www.encodeproject.org/files/ENCFF615CWQ/@@download/ENCFF615CWQ.bigBed released s3://encode-public/2021/02/04/94b5766c-ab6c-4346-a233-cb41e315e0eb/ENCFF615CWQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/94b5766c-ab6c-4346-a233-cb41e315e0eb/ENCFF615CWQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF756BHU bigWig bigWig signal p-value GRCh38 ENCSR293QAR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MTA2-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF121RRZ/, /files/ENCFF232AKP/, /files/ENCFF803UWC/ 2373663740 ENCODE Processing Pipeline 7804ac88a2394193c9f73672c7af4ed9 https://www.encodeproject.org/files/ENCFF756BHU/@@download/ENCFF756BHU.bigWig released s3://encode-public/2021/02/04/9f34394b-f59c-42bc-b87b-51f87bb30b10/ENCFF756BHU.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/9f34394b-f59c-42bc-b87b-51f87bb30b10/ENCFF756BHU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF197TWD bigWig bigWig signal p-value GRCh38 ENCSR000BHA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCL11A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF882OBA/, /files/ENCFF075XYL/, /files/ENCFF148VRC/, /files/ENCFF692QYX/, /files/ENCFF519KIS/ 962995434 ENCODE Processing Pipeline 58c73503f06ddbeb4ec8a15bf4e92aca https://www.encodeproject.org/files/ENCFF197TWD/@@download/ENCFF197TWD.bigWig released s3://encode-public/2020/12/11/9b1b49cb-b265-4610-b23e-3bb1705390fa/ENCFF197TWD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/9b1b49cb-b265-4610-b23e-3bb1705390fa/ENCFF197TWD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF717YPR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCL11A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF824QXX/ 671866 ENCODE Processing Pipeline 7e0b5a0f51b2e52b618316345b04542c https://www.encodeproject.org/files/ENCFF717YPR/@@download/ENCFF717YPR.bigBed released s3://encode-public/2020/12/11/ad412e96-4174-429f-8271-e404b0257613/ENCFF717YPR.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/ad412e96-4174-429f-8271-e404b0257613/ENCFF717YPR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF824QXX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCL11A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF882OBA/, /files/ENCFF075XYL/, /files/ENCFF148VRC/, /files/ENCFF356LFX/, /files/ENCFF692QYX/, /files/ENCFF519KIS/ 354771 ENCODE Processing Pipeline 9905ff1b38514164e11357822c3a4f88 https://www.encodeproject.org/files/ENCFF824QXX/@@download/ENCFF824QXX.bed.gz released s3://encode-public/2020/12/11/c78ae59d-b8cb-4bc7-87a1-e9b50753ee7e/ENCFF824QXX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/c78ae59d-b8cb-4bc7-87a1-e9b50753ee7e/ENCFF824QXX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF095ZVH bigWig bigWig signal p-value GRCh38 ENCSR000DYX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SIN3A-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF958CAO/, /files/ENCFF683ICJ/, /files/ENCFF783HVZ/, /files/ENCFF042LWY/, /files/ENCFF278NPZ/, /files/ENCFF863XTX/ 702444379 ENCODE Processing Pipeline afceb749b1fe2f358e86de6e87806e70 https://www.encodeproject.org/files/ENCFF095ZVH/@@download/ENCFF095ZVH.bigWig released s3://encode-public/2021/01/08/9ea41ec3-c197-463a-a7e8-bada65024b14/ENCFF095ZVH.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/9ea41ec3-c197-463a-a7e8-bada65024b14/ENCFF095ZVH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF013QNV bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SIN3A-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF958CAO/, /files/ENCFF683ICJ/, /files/ENCFF783HVZ/, /files/ENCFF042LWY/, /files/ENCFF278NPZ/, /files/ENCFF356LFX/, /files/ENCFF863XTX/ 250433 ENCODE Processing Pipeline 0380ea746e5cc53031efbbf4da156b55 https://www.encodeproject.org/files/ENCFF013QNV/@@download/ENCFF013QNV.bed.gz released s3://encode-public/2021/01/08/e1e8c5b1-439b-493d-8be6-988d8bf590ad/ENCFF013QNV.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/e1e8c5b1-439b-493d-8be6-988d8bf590ad/ENCFF013QNV.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF238GUI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SIN3A-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF013QNV/ 630671 ENCODE Processing Pipeline ab90d7f1982c36453a5dbbbeacf77485 https://www.encodeproject.org/files/ENCFF238GUI/@@download/ENCFF238GUI.bigBed released s3://encode-public/2021/01/08/95328f44-6aba-427f-aef0-01f1b1723dba/ENCFF238GUI.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/95328f44-6aba-427f-aef0-01f1b1723dba/ENCFF238GUI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF462VWT bigWig bigWig signal p-value GRCh38 ENCSR000DYP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF384-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF934QZN/, /files/ENCFF042LWY/, /files/ENCFF140VFN/, /files/ENCFF278NPZ/, /files/ENCFF863XTX/, /files/ENCFF683ICJ/ 611447547 ENCODE Processing Pipeline 91ff39190a229c6dc9de61f7c11dacb9 https://www.encodeproject.org/files/ENCFF462VWT/@@download/ENCFF462VWT.bigWig released s3://encode-public/2021/01/08/566b05d0-ad8d-4cdb-9526-71ed58945c24/ENCFF462VWT.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/566b05d0-ad8d-4cdb-9526-71ed58945c24/ENCFF462VWT.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF955FRU bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF384-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF934QZN/, /files/ENCFF042LWY/, /files/ENCFF140VFN/, /files/ENCFF278NPZ/, /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF356LFX/ 269663 ENCODE Processing Pipeline 6e651f8d5f278787e71c84d1feee2d85 https://www.encodeproject.org/files/ENCFF955FRU/@@download/ENCFF955FRU.bed.gz released s3://encode-public/2021/01/08/6927f249-7f61-4153-8dce-19220100baf6/ENCFF955FRU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/6927f249-7f61-4153-8dce-19220100baf6/ENCFF955FRU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF229VSP bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF384-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF955FRU/ 528583 ENCODE Processing Pipeline fafa9d5991c3dcdebe4f0ce519244cd6 https://www.encodeproject.org/files/ENCFF229VSP/@@download/ENCFF229VSP.bigBed released s3://encode-public/2021/01/08/bb7c921e-1d85-423e-8f67-ba08b9904334/ENCFF229VSP.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/bb7c921e-1d85-423e-8f67-ba08b9904334/ENCFF229VSP.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF441IMJ bigWig bigWig signal p-value GRCh38 ENCSR000BQT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF882OBA/, /files/ENCFF121KBC/, /files/ENCFF986FIK/, /files/ENCFF075XYL/ 843907898 ENCODE Processing Pipeline 5ea83434c89b4836ff67cb89ae4934a9 https://www.encodeproject.org/files/ENCFF441IMJ/@@download/ENCFF441IMJ.bigWig released s3://encode-public/2020/12/11/fcbaf004-b219-40dd-b2bf-85ede5951bbe/ENCFF441IMJ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/fcbaf004-b219-40dd-b2bf-85ede5951bbe/ENCFF441IMJ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth insufficient read depth ENCFF700TAS bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF882OBA/, /files/ENCFF356LFX/, /files/ENCFF121KBC/, /files/ENCFF986FIK/, /files/ENCFF075XYL/ 306991 ENCODE Processing Pipeline 7a7c752dbcd858b11072a51beb444705 https://www.encodeproject.org/files/ENCFF700TAS/@@download/ENCFF700TAS.bed.gz released s3://encode-public/2020/12/11/668bbe98-79a1-4844-b40e-2a3463da59ed/ENCFF700TAS.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/668bbe98-79a1-4844-b40e-2a3463da59ed/ENCFF700TAS.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth insufficient read depth ENCFF658WIO bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF700TAS/ 576766 ENCODE Processing Pipeline a795110ba98eb18b2e197262a6e17245 https://www.encodeproject.org/files/ENCFF658WIO/@@download/ENCFF658WIO.bigBed released s3://encode-public/2020/12/11/d68d6011-30ac-485f-8735-de8b6d0974cd/ENCFF658WIO.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/d68d6011-30ac-485f-8735-de8b6d0974cd/ENCFF658WIO.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth insufficient read depth ENCFF090BWM bigWig bigWig signal p-value GRCh38 ENCSR000BNP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YY1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF882OBA/, /files/ENCFF481OXC/, /files/ENCFF075XYL/, /files/ENCFF554UVL/, /files/ENCFF676OVC/, /files/ENCFF519KIS/ 1158322988 ENCODE Processing Pipeline 2d3fa3da3dbf2349eaced9f5cf2f9291 https://www.encodeproject.org/files/ENCFF090BWM/@@download/ENCFF090BWM.bigWig released s3://encode-public/2021/01/06/cf53be50-33ea-438c-bb79-a51a53b3d3aa/ENCFF090BWM.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/06/cf53be50-33ea-438c-bb79-a51a53b3d3aa/ENCFF090BWM.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF908JTL bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BNP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YY1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF446ZSX/ 1286049 ENCODE Processing Pipeline fcd5cbc4d4ad59f6f4186b70888b2166 https://www.encodeproject.org/files/ENCFF908JTL/@@download/ENCFF908JTL.bigBed released s3://encode-public/2021/01/06/20c3f918-9588-4112-a2a7-b173faf6013c/ENCFF908JTL.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/06/20c3f918-9588-4112-a2a7-b173faf6013c/ENCFF908JTL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF446ZSX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BNP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YY1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF882OBA/, /files/ENCFF481OXC/, /files/ENCFF075XYL/, /files/ENCFF554UVL/, /files/ENCFF356LFX/, /files/ENCFF676OVC/, /files/ENCFF519KIS/ 614197 ENCODE Processing Pipeline 6942c2126255ef3a76a197ec93a3459e https://www.encodeproject.org/files/ENCFF446ZSX/@@download/ENCFF446ZSX.bed.gz released s3://encode-public/2021/01/06/ba34b25a-b21b-46dc-a3c9-062df3e80ff0/ENCFF446ZSX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/06/ba34b25a-b21b-46dc-a3c9-062df3e80ff0/ENCFF446ZSX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF023QWA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EYV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUND-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF848JON/, /files/ENCFF658PBP/, /files/ENCFF509ZNE/, /files/ENCFF356LFX/ 36494 ENCODE Processing Pipeline 77bb2a85b2c6b43b71ae5676742b3ea5 https://www.encodeproject.org/files/ENCFF023QWA/@@download/ENCFF023QWA.bed.gz released s3://encode-public/2020/12/25/338f43c4-9e94-4068-88cd-e01a722423ac/ENCFF023QWA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/25/338f43c4-9e94-4068-88cd-e01a722423ac/ENCFF023QWA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance insufficient read length extremely low read depth ENCFF623ZSV bigWig bigWig signal p-value GRCh38 ENCSR000EYV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUND-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF848JON/, /files/ENCFF658PBP/, /files/ENCFF509ZNE/ 207448615 ENCODE Processing Pipeline fed34ecf8385b581ae9ba7073699a8fd https://www.encodeproject.org/files/ENCFF623ZSV/@@download/ENCFF623ZSV.bigWig released s3://encode-public/2020/12/25/f75b96f8-9e6c-4a6b-a263-17996d0a543c/ENCFF623ZSV.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/25/f75b96f8-9e6c-4a6b-a263-17996d0a543c/ENCFF623ZSV.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance insufficient read length extremely low read depth ENCFF384XFV bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EYV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUND-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF023QWA/ 98665 ENCODE Processing Pipeline 4d3abaec5b04d51b735c25cf546cd2e7 https://www.encodeproject.org/files/ENCFF384XFV/@@download/ENCFF384XFV.bigBed released s3://encode-public/2020/12/25/281af9e6-8d22-4a29-966b-c9140305e37d/ENCFF384XFV.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/25/281af9e6-8d22-4a29-966b-c9140305e37d/ENCFF384XFV.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance insufficient read length extremely low read depth ENCFF321ERB bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SREBF1-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF397YRO/ 161969 ENCODE Processing Pipeline 1e2842de9364c28e508e9061c579f653 https://www.encodeproject.org/files/ENCFF321ERB/@@download/ENCFF321ERB.bigBed released s3://encode-public/2020/12/26/c2bfc9ec-c110-401b-a092-cce75e948040/ENCFF321ERB.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/c2bfc9ec-c110-401b-a092-cce75e948040/ENCFF321ERB.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking ENCFF392MTW bigWig bigWig signal p-value GRCh38 ENCSR000DYU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SREBF1-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF398RFO/, /files/ENCFF465NOY/, /files/ENCFF770CJK/, /files/ENCFF196PQA/ 643801322 ENCODE Processing Pipeline dc1f621d21f914ec36aa243dce8c529e https://www.encodeproject.org/files/ENCFF392MTW/@@download/ENCFF392MTW.bigWig released s3://encode-public/2020/12/26/fdc08ba1-6d32-42d6-aba2-ece8ce84f89b/ENCFF392MTW.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/fdc08ba1-6d32-42d6-aba2-ece8ce84f89b/ENCFF392MTW.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking ENCFF397YRO bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SREBF1-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF770CJK/, /files/ENCFF398RFO/, /files/ENCFF196PQA/, /files/ENCFF356LFX/, /files/ENCFF465NOY/ 66927 ENCODE Processing Pipeline 32cd5d170c18b4048a04c376083f9a53 https://www.encodeproject.org/files/ENCFF397YRO/@@download/ENCFF397YRO.bed.gz released s3://encode-public/2020/12/26/11e57144-ded1-4dcd-9a69-52214556ba50/ENCFF397YRO.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/11e57144-ded1-4dcd-9a69-52214556ba50/ENCFF397YRO.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking ENCFF532WJA bigWig bigWig signal p-value GRCh38 ENCSR000EAD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2012-05-14 ENCODE see document 1, 2, 3, 4, 5, 6, 7 1_1, 2_1, 3_1, 4_1, 5_1, 6_1, 7_1 /files/ENCFF278NPZ/, /files/ENCFF306JCA/, /files/ENCFF248WXH/, /files/ENCFF863XTX/, /files/ENCFF441GAS/, /files/ENCFF590GEB/, /files/ENCFF811KVZ/, /files/ENCFF944QSC/, /files/ENCFF603TJG/ 382940605 ENCODE Processing Pipeline 77c8467890403b714a15ebd1463dbed3 https://www.encodeproject.org/files/ENCFF532WJA/@@download/ENCFF532WJA.bigWig released s3://encode-public/2020/12/27/5d4ef776-110d-4024-b348-39734c9c0064/ENCFF532WJA.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/5d4ef776-110d-4024-b348-39734c9c0064/ENCFF532WJA.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mixed read lengths insufficient read depth, insufficient read length extremely low read depth ENCFF886PSD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EAD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2012-05-14 ENCODE see document 1, 2, 3, 4, 5, 6, 7 1_1, 2_1, 3_1, 4_1, 5_1, 6_1, 7_1 /files/ENCFF278NPZ/, /files/ENCFF306JCA/, /files/ENCFF248WXH/, /files/ENCFF863XTX/, /files/ENCFF441GAS/, /files/ENCFF356LFX/, /files/ENCFF590GEB/, /files/ENCFF811KVZ/, /files/ENCFF944QSC/, /files/ENCFF603TJG/ 512145 ENCODE Processing Pipeline 34f9dd2a49b4f9137f54ecd65e617f1a https://www.encodeproject.org/files/ENCFF886PSD/@@download/ENCFF886PSD.bed.gz released s3://encode-public/2020/12/27/567d64e7-fb65-4ee4-aebd-1cceb6ca7d41/ENCFF886PSD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/567d64e7-fb65-4ee4-aebd-1cceb6ca7d41/ENCFF886PSD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mixed read lengths insufficient read depth, insufficient read length extremely low read depth ENCFF263VRI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EAD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2012-05-14 ENCODE see document 1, 2, 3, 4, 5, 6, 7 1_1, 2_1, 3_1, 4_1, 5_1, 6_1, 7_1 /files/ENCFF886PSD/ 1163137 ENCODE Processing Pipeline 3cc87abfd43179e05dbf4409094965ad https://www.encodeproject.org/files/ENCFF263VRI/@@download/ENCFF263VRI.bigBed released s3://encode-public/2020/12/27/57c852b9-daa4-4f10-9fc7-6e27ccafe4c7/ENCFF263VRI.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/57c852b9-daa4-4f10-9fc7-6e27ccafe4c7/ENCFF263VRI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mixed read lengths insufficient read depth, insufficient read length extremely low read depth ENCFF783QWK bigWig bigWig signal p-value GRCh38 ENCSR000BGS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TAF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF075XYL/, /files/ENCFF283MZV/, /files/ENCFF519KIS/, /files/ENCFF617ZDI/, /files/ENCFF882OBA/ 1011661662 ENCODE Processing Pipeline 173343569cceef279a5031d8ffa7d706 https://www.encodeproject.org/files/ENCFF783QWK/@@download/ENCFF783QWK.bigWig released s3://encode-public/2020/12/27/364d9563-99fb-4dd8-a223-bdc639f73aec/ENCFF783QWK.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/364d9563-99fb-4dd8-a223-bdc639f73aec/ENCFF783QWK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF502IPK bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TAF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF075XYL/, /files/ENCFF283MZV/, /files/ENCFF356LFX/, /files/ENCFF617ZDI/, /files/ENCFF519KIS/, /files/ENCFF882OBA/ 292189 ENCODE Processing Pipeline 94f59d1843f85d07290903fc9c460a2a https://www.encodeproject.org/files/ENCFF502IPK/@@download/ENCFF502IPK.bed.gz released s3://encode-public/2020/12/27/f70aeda4-1b61-49dc-93c0-6e766cee760b/ENCFF502IPK.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/f70aeda4-1b61-49dc-93c0-6e766cee760b/ENCFF502IPK.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF746UKX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TAF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF502IPK/ 553527 ENCODE Processing Pipeline de082fdbbaa1866833a2cda1b8b6d3bd https://www.encodeproject.org/files/ENCFF746UKX/@@download/ENCFF746UKX.bigBed released s3://encode-public/2020/12/27/80cf716c-1a94-4c32-9b2d-66c435e30e2d/ENCFF746UKX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/80cf716c-1a94-4c32-9b2d-66c435e30e2d/ENCFF746UKX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF993CDE bigWig bigWig signal p-value GRCh38 ENCSR000DYT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SREBF2-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF756UDR/, /files/ENCFF196PQA/, /files/ENCFF770CJK/, /files/ENCFF594EHC/ 810906854 ENCODE Processing Pipeline b63bd3cd6892f485ce506cbb3f118d92 https://www.encodeproject.org/files/ENCFF993CDE/@@download/ENCFF993CDE.bigWig released s3://encode-public/2020/12/26/644645e3-d668-4ab9-a3ac-e722c034fb05/ENCFF993CDE.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/644645e3-d668-4ab9-a3ac-e722c034fb05/ENCFF993CDE.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking ENCFF896MPE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SREBF2-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF756UDR/, /files/ENCFF196PQA/, /files/ENCFF594EHC/, /files/ENCFF356LFX/, /files/ENCFF770CJK/ 31115 ENCODE Processing Pipeline 07d5177657808e4aa8f347af97815611 https://www.encodeproject.org/files/ENCFF896MPE/@@download/ENCFF896MPE.bed.gz released s3://encode-public/2020/12/26/cefad1f3-2886-47ec-ad29-73d9b1f528cc/ENCFF896MPE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/cefad1f3-2886-47ec-ad29-73d9b1f528cc/ENCFF896MPE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking ENCFF670DYX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SREBF2-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF896MPE/ 106950 ENCODE Processing Pipeline 37816bd8ac18ea626a83e4cf3e602212 https://www.encodeproject.org/files/ENCFF670DYX/@@download/ENCFF670DYX.bigBed released s3://encode-public/2020/12/26/6dff86b3-ddd5-479f-905d-ae4d0f4d4c24/ENCFF670DYX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/6dff86b3-ddd5-479f-905d-ae4d0f4d4c24/ENCFF670DYX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking ENCFF080ZBT bigWig bigWig signal p-value GRCh38 ENCSR000BJD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RXRA-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF052IWA/, /files/ENCFF890GAA/, /files/ENCFF519KIS/ 801868929 ENCODE Processing Pipeline 57e8535b5435f72e692c56d5673079f3 https://www.encodeproject.org/files/ENCFF080ZBT/@@download/ENCFF080ZBT.bigWig released s3://encode-public/2020/12/26/d4e55e1c-4ac4-4599-8c43-beb20dd358c7/ENCFF080ZBT.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/d4e55e1c-4ac4-4599-8c43-beb20dd358c7/ENCFF080ZBT.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking insufficient read depth, severe bottlenecking, poor library complexity ENCFF083VEI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BJD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RXRA-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF063KLF/ 101558 ENCODE Processing Pipeline 5a395e1610d5a5ceb5e7072cd786fa75 https://www.encodeproject.org/files/ENCFF083VEI/@@download/ENCFF083VEI.bigBed released s3://encode-public/2020/12/26/0c66941b-8f04-4700-a7f0-282a43e46490/ENCFF083VEI.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/0c66941b-8f04-4700-a7f0-282a43e46490/ENCFF083VEI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking insufficient read depth, severe bottlenecking, poor library complexity ENCFF063KLF bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BJD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RXRA-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF052IWA/, /files/ENCFF356LFX/, /files/ENCFF890GAA/, /files/ENCFF519KIS/ 33596 ENCODE Processing Pipeline f11ff0c936cd3340797885407c2333c8 https://www.encodeproject.org/files/ENCFF063KLF/@@download/ENCFF063KLF.bed.gz released s3://encode-public/2020/12/26/f1dcbd91-ecb7-4c29-9207-870618995147/ENCFF063KLF.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/f1dcbd91-ecb7-4c29-9207-870618995147/ENCFF063KLF.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking insufficient read depth, severe bottlenecking, poor library complexity ENCFF387WGM bigWig bigWig signal p-value GRCh38 ENCSR000ARD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EZH2-human DNA 2012-03-06 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF850RIE/, /files/ENCFF795NFT/, /files/ENCFF066RCS/, /files/ENCFF893IZW/ 436263001 ENCODE Processing Pipeline 8621552a688c99a5df85f849549b7a56 https://www.encodeproject.org/files/ENCFF387WGM/@@download/ENCFF387WGM.bigWig released s3://encode-public/2020/12/28/9868c65d-699d-4052-9ed6-81f7d8f98844/ENCFF387WGM.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/28/9868c65d-699d-4052-9ed6-81f7d8f98844/ENCFF387WGM.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, control low read depth, inconsistent platforms, low read depth, borderline replicate concordance, mild to moderate bottlenecking control insufficient read depth ENCFF339YTO bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000ARD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EZH2-human DNA 2012-03-06 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF850RIE/, /files/ENCFF795NFT/, /files/ENCFF893IZW/, /files/ENCFF066RCS/ 37890 ENCODE Processing Pipeline 1901baa6a54e23df1171962bd056d935 https://www.encodeproject.org/files/ENCFF339YTO/@@download/ENCFF339YTO.bed.gz released s3://encode-public/2020/12/28/fcb229c5-54f6-4f08-b922-6f47799ae601/ENCFF339YTO.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/28/fcb229c5-54f6-4f08-b922-6f47799ae601/ENCFF339YTO.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, control low read depth, inconsistent platforms, low read depth, borderline replicate concordance, mild to moderate bottlenecking control insufficient read depth ENCFF635TDF bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000ARD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EZH2-human DNA 2012-03-06 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF339YTO/ 152520 ENCODE Processing Pipeline 0b7260a5bd885c85c221fc61f86a9f16 https://www.encodeproject.org/files/ENCFF635TDF/@@download/ENCFF635TDF.bigBed released s3://encode-public/2020/12/28/9a15eb87-dc56-4beb-a225-07d0636b2836/ENCFF635TDF.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/28/9a15eb87-dc56-4beb-a225-07d0636b2836/ENCFF635TDF.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, control low read depth, inconsistent platforms, low read depth, borderline replicate concordance, mild to moderate bottlenecking control insufficient read depth ENCFF294IGP bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR839XZU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CREM-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF612NNB/, /files/ENCFF356LFX/, /files/ENCFF729SDE/, /files/ENCFF923QPK/, /files/ENCFF219FGG/ 601360 ENCODE Processing Pipeline a78cba019614d13d799b17b20acf28ec https://www.encodeproject.org/files/ENCFF294IGP/@@download/ENCFF294IGP.bed.gz released s3://encode-public/2021/02/04/924d5a8d-c4bf-4fc5-bba5-995a8501e472/ENCFF294IGP.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/924d5a8d-c4bf-4fc5-bba5-995a8501e472/ENCFF294IGP.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF061VUA bigWig bigWig signal p-value GRCh38 ENCSR839XZU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CREM-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF219FGG/, /files/ENCFF729SDE/, /files/ENCFF612NNB/, /files/ENCFF923QPK/ 855767567 ENCODE Processing Pipeline 1b15c691444b422b44f9e10b8f16093c https://www.encodeproject.org/files/ENCFF061VUA/@@download/ENCFF061VUA.bigWig released s3://encode-public/2021/02/04/4e9b7133-b672-4004-a02a-818521b7c182/ENCFF061VUA.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/4e9b7133-b672-4004-a02a-818521b7c182/ENCFF061VUA.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF391UGE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR839XZU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CREM-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF294IGP/ 1196744 ENCODE Processing Pipeline 8b834417bfa1726c1f2a504d8fa5f1c3 https://www.encodeproject.org/files/ENCFF391UGE/@@download/ENCFF391UGE.bigBed released s3://encode-public/2021/02/04/bce3e6f6-93f2-4689-86a2-c9c092066abd/ENCFF391UGE.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/bce3e6f6-93f2-4689-86a2-c9c092066abd/ENCFF391UGE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF168RBB bigWig bigWig signal p-value GRCh38 ENCSR974OFJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KLF5-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF634WBE/, /files/ENCFF783FZL/, /files/ENCFF526WYZ/, /files/ENCFF561BLF/ 1968057944 ENCODE Processing Pipeline fcc6afc36e75e62349ae7a4d638e11ea https://www.encodeproject.org/files/ENCFF168RBB/@@download/ENCFF168RBB.bigWig released s3://encode-public/2020/12/03/feaf5c77-b33b-4b1d-ab9c-89ceb4059d17/ENCFF168RBB.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/feaf5c77-b33b-4b1d-ab9c-89ceb4059d17/ENCFF168RBB.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking partially characterized antibody ENCFF570KBU bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR974OFJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KLF5-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF992IBT/ 445206 ENCODE Processing Pipeline 455ec03865fd80b823d4379d17ba9348 https://www.encodeproject.org/files/ENCFF570KBU/@@download/ENCFF570KBU.bigBed released s3://encode-public/2020/12/03/2af102dd-9512-46c5-a03c-865d4968eef9/ENCFF570KBU.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/2af102dd-9512-46c5-a03c-865d4968eef9/ENCFF570KBU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking partially characterized antibody ENCFF992IBT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR974OFJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KLF5-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF561BLF/, /files/ENCFF634WBE/, /files/ENCFF356LFX/, /files/ENCFF526WYZ/ 192014 ENCODE Processing Pipeline dc15cbfb65e6b5e2e9eb66c5563b2395 https://www.encodeproject.org/files/ENCFF992IBT/@@download/ENCFF992IBT.bed.gz released s3://encode-public/2020/12/03/275093c7-5b46-4b27-a32f-ccfc94ace0d1/ENCFF992IBT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/275093c7-5b46-4b27-a32f-ccfc94ace0d1/ENCFF992IBT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking partially characterized antibody ENCFF585BRC bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR000DZC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RCOR1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF356LFX/, /files/ENCFF042LWY/, /files/ENCFF605XOV/, /files/ENCFF278NPZ/, /files/ENCFF551QSX/ 138495 ENCODE Processing Pipeline 3e56155ded9186e4e0b0946a96193f23 https://www.encodeproject.org/files/ENCFF585BRC/@@download/ENCFF585BRC.bed.gz released s3://encode-public/2021/01/08/33d2d8e1-0fd1-479a-9843-60f696812f33/ENCFF585BRC.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/33d2d8e1-0fd1-479a-9843-60f696812f33/ENCFF585BRC.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF781PMJ bigWig bigWig signal p-value GRCh38 ENCSR000DZC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RCOR1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF042LWY/, /files/ENCFF605XOV/, /files/ENCFF278NPZ/, /files/ENCFF551QSX/ 551012155 ENCODE Processing Pipeline 3ba58dfefb4c10ee100eba6c7b3984ce https://www.encodeproject.org/files/ENCFF781PMJ/@@download/ENCFF781PMJ.bigWig released s3://encode-public/2021/01/08/dbe956fd-530f-4b53-bf15-e62cfa1a0259/ENCFF781PMJ.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/dbe956fd-530f-4b53-bf15-e62cfa1a0259/ENCFF781PMJ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF982CRX bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR000DZC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RCOR1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF585BRC/ 297000 ENCODE Processing Pipeline e80d8e68d5533f7d34f3c7476910dfda https://www.encodeproject.org/files/ENCFF982CRX/@@download/ENCFF982CRX.bigBed released s3://encode-public/2021/01/08/1a78a4cf-5d44-45c5-ab16-4eaf2edc00c3/ENCFF982CRX.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/1a78a4cf-5d44-45c5-ab16-4eaf2edc00c3/ENCFF982CRX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF836LCO bigWig bigWig signal p-value GRCh38 ENCSR000BRX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPB-human DNA 2012-09-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF236TDZ/, /files/ENCFF691UEA/, /files/ENCFF895IVX/, /files/ENCFF305BPN/, /files/ENCFF339NUH/ 1272936763 ENCODE Processing Pipeline 9fec7fd617ded443d2a189a0bfef0769 https://www.encodeproject.org/files/ENCFF836LCO/@@download/ENCFF836LCO.bigWig released s3://encode-public/2020/12/26/97ffcb41-1395-47a5-b177-7c7abc407e69/ENCFF836LCO.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/97ffcb41-1395-47a5-b177-7c7abc407e69/ENCFF836LCO.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, inconsistent platforms, low read depth ENCFF942VJF bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPB-human DNA 2012-09-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF955YFB/ 271330 ENCODE Processing Pipeline e58c3a56ef5d7483e7c238139a9acbdb https://www.encodeproject.org/files/ENCFF942VJF/@@download/ENCFF942VJF.bigBed released s3://encode-public/2020/12/26/81b23d4e-ab79-4f25-8c42-32e603b490aa/ENCFF942VJF.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/81b23d4e-ab79-4f25-8c42-32e603b490aa/ENCFF942VJF.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, inconsistent platforms, low read depth ENCFF955YFB bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPB-human DNA 2012-09-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF236TDZ/, /files/ENCFF691UEA/, /files/ENCFF895IVX/, /files/ENCFF305BPN/, /files/ENCFF356LFX/, /files/ENCFF339NUH/ 99326 ENCODE Processing Pipeline 7aab41539150fcc58cdea63ba9336abe https://www.encodeproject.org/files/ENCFF955YFB/@@download/ENCFF955YFB.bed.gz released s3://encode-public/2020/12/26/5b279daa-60ac-4dec-a047-958a2a702ebc/ENCFF955YFB.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/5b279daa-60ac-4dec-a047-958a2a702ebc/ENCFF955YFB.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, inconsistent platforms, low read depth ENCFF616FJX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EUJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF432HLX/ 597473 ENCODE Processing Pipeline a9033092c4a293dc0c1fa913c4f53598 https://www.encodeproject.org/files/ENCFF616FJX/@@download/ENCFF616FJX.bigBed released s3://encode-public/2020/12/27/6ae528d2-7111-4e2e-95bf-b237a0428ae3/ENCFF616FJX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/6ae528d2-7111-4e2e-95bf-b237a0428ae3/ENCFF616FJX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF432HLX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EUJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF356LFX/, /files/ENCFF220SRF/, /files/ENCFF885ZLG/ 248434 ENCODE Processing Pipeline 4338c7d975f9d99e3fbfdbad043784c6 https://www.encodeproject.org/files/ENCFF432HLX/@@download/ENCFF432HLX.bed.gz released s3://encode-public/2020/12/27/d8657ed4-8cfe-44d1-97bf-4860a8d77456/ENCFF432HLX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/d8657ed4-8cfe-44d1-97bf-4860a8d77456/ENCFF432HLX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF206IOA bigWig bigWig signal p-value GRCh38 ENCSR000EUJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF220SRF/, /files/ENCFF885ZLG/ 536386482 ENCODE Processing Pipeline 30fd730d331c1e8dc1b5534a306c386c https://www.encodeproject.org/files/ENCFF206IOA/@@download/ENCFF206IOA.bigWig released s3://encode-public/2020/12/27/a7dc17f6-3347-4ff5-a307-7ba23f893cf0/ENCFF206IOA.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/a7dc17f6-3347-4ff5-a307-7ba23f893cf0/ENCFF206IOA.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF948QYK bigWig bigWig signal p-value GRCh38 ENCSR000DYS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUND-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF196PQA/, /files/ENCFF078GJW/, /files/ENCFF770CJK/, /files/ENCFF891HXN/ 535027255 ENCODE Processing Pipeline b7076b4b3fbf5e4382b3592ad0ff0d1b https://www.encodeproject.org/files/ENCFF948QYK/@@download/ENCFF948QYK.bigWig released s3://encode-public/2020/12/26/80265612-228d-4905-b8b7-5d05c8cc4c9b/ENCFF948QYK.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/80265612-228d-4905-b8b7-5d05c8cc4c9b/ENCFF948QYK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF134BQO bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUND-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF078GJW/, /files/ENCFF891HXN/, /files/ENCFF356LFX/, /files/ENCFF770CJK/, /files/ENCFF196PQA/ 141773 ENCODE Processing Pipeline ab9770cdaffca5f3a79b3cee82ef346f https://www.encodeproject.org/files/ENCFF134BQO/@@download/ENCFF134BQO.bed.gz released s3://encode-public/2020/12/26/4af2c2f9-6406-4bd9-9d84-0205b29aad2c/ENCFF134BQO.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/4af2c2f9-6406-4bd9-9d84-0205b29aad2c/ENCFF134BQO.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF086GAB bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens JUND-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF134BQO/ 269352 ENCODE Processing Pipeline dd67930142490d333750e11e91e37878 https://www.encodeproject.org/files/ENCFF086GAB/@@download/ENCFF086GAB.bigBed released s3://encode-public/2020/12/26/8b9bde98-6c1c-4bfe-9f55-3711c815c284/ENCFF086GAB.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/8b9bde98-6c1c-4bfe-9f55-3711c815c284/ENCFF086GAB.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF851YWJ bigWig bigWig signal p-value GRCh38 ENCSR000DNO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KAT2A-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF495LKP/, /files/ENCFF658PBP/, /files/ENCFF117AZM/ 453416372 ENCODE Processing Pipeline 4cb6afbed12722e4546fe31aadfa3d6e https://www.encodeproject.org/files/ENCFF851YWJ/@@download/ENCFF851YWJ.bigWig released s3://encode-public/2020/12/27/39194ce2-1966-44d0-842c-7e10aa957400/ENCFF851YWJ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/39194ce2-1966-44d0-842c-7e10aa957400/ENCFF851YWJ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF464BFV bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR000DNO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KAT2A-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF333PDI/ 75744 ENCODE Processing Pipeline c2618e7eb0c0df77c83dda818ed33c3b https://www.encodeproject.org/files/ENCFF464BFV/@@download/ENCFF464BFV.bigBed released s3://encode-public/2020/12/27/6594b3ee-7359-43f3-bef5-b0f148a664b7/ENCFF464BFV.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/6594b3ee-7359-43f3-bef5-b0f148a664b7/ENCFF464BFV.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF333PDI bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR000DNO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KAT2A-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF495LKP/, /files/ENCFF356LFX/, /files/ENCFF658PBP/, /files/ENCFF117AZM/ 2807 ENCODE Processing Pipeline 8e24be37bdeb76eea8deb3cb38013683 https://www.encodeproject.org/files/ENCFF333PDI/@@download/ENCFF333PDI.bed.gz released s3://encode-public/2020/12/27/6abefc4f-6f80-4c40-a227-76b36721df99/ENCFF333PDI.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/6abefc4f-6f80-4c40-a227-76b36721df99/ENCFF333PDI.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF568SNH bigWig bigWig signal p-value GRCh38 ENCSR000DZI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MXI1-human DNA 2011-10-29 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF790FNR/, /files/ENCFF499EUU/, /files/ENCFF863XTX/ 517743066 ENCODE Processing Pipeline de000a132a43a259adb36afc434514d0 https://www.encodeproject.org/files/ENCFF568SNH/@@download/ENCFF568SNH.bigWig released s3://encode-public/2021/01/02/d7809b9e-a9fa-4a74-ad17-aff8101cc73c/ENCFF568SNH.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/02/d7809b9e-a9fa-4a74-ad17-aff8101cc73c/ENCFF568SNH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF376AEL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MXI1-human DNA 2011-10-29 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF356LFX/, /files/ENCFF278NPZ/, /files/ENCFF790FNR/, /files/ENCFF499EUU/ 394855 ENCODE Processing Pipeline 626d404caf55e38aa32eb8edb970b975 https://www.encodeproject.org/files/ENCFF376AEL/@@download/ENCFF376AEL.bed.gz released s3://encode-public/2021/01/02/cd650945-af54-422f-9ddb-bad4b3288c54/ENCFF376AEL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/02/cd650945-af54-422f-9ddb-bad4b3288c54/ENCFF376AEL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF666NJR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MXI1-human DNA 2011-10-29 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF376AEL/ 905906 ENCODE Processing Pipeline c3d031c15e82e40fedf2258ffa9ddd0f https://www.encodeproject.org/files/ENCFF666NJR/@@download/ENCFF666NJR.bigBed released s3://encode-public/2021/01/02/eb353510-1bc8-4f52-85fd-7dff2e8dc303/ENCFF666NJR.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/02/eb353510-1bc8-4f52-85fd-7dff2e8dc303/ENCFF666NJR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF902BPJ bigWig bigWig signal p-value GRCh38 ENCSR000EAA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens WRNIP1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF042LWY/, /files/ENCFF753DOO/, /files/ENCFF683ICJ/, /files/ENCFF058SQO/, /files/ENCFF863XTX/ 538756569 ENCODE Processing Pipeline 8f67997a05da89027ebde8b73b5ed8f6 https://www.encodeproject.org/files/ENCFF902BPJ/@@download/ENCFF902BPJ.bigWig released s3://encode-public/2021/01/07/b9e68f3b-3869-49dd-ad3f-d8fb45438f89/ENCFF902BPJ.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/07/b9e68f3b-3869-49dd-ad3f-d8fb45438f89/ENCFF902BPJ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance, low read depth ENCFF384UKU bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EAA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens WRNIP1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF855UKX/ 209013 ENCODE Processing Pipeline 6962615af3e83f65336d031a574b4b78 https://www.encodeproject.org/files/ENCFF384UKU/@@download/ENCFF384UKU.bigBed released s3://encode-public/2021/01/07/c96222b5-90ca-4f9f-ae7c-c0a4afac58ea/ENCFF384UKU.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/07/c96222b5-90ca-4f9f-ae7c-c0a4afac58ea/ENCFF384UKU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance, low read depth ENCFF855UKX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EAA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens WRNIP1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF042LWY/, /files/ENCFF753DOO/, /files/ENCFF683ICJ/, /files/ENCFF058SQO/, /files/ENCFF863XTX/, /files/ENCFF356LFX/ 83576 ENCODE Processing Pipeline 659add048ee79eb9737da2ae4f8bfa53 https://www.encodeproject.org/files/ENCFF855UKX/@@download/ENCFF855UKX.bed.gz released s3://encode-public/2021/01/07/1a081974-8199-47ba-b7e3-2caa63fb32a4/ENCFF855UKX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/07/1a081974-8199-47ba-b7e3-2caa63fb32a4/ENCFF855UKX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance, low read depth ENCFF053UZX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BUF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CREB1-human DNA 2012-09-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF305BPN/, /files/ENCFF538DUT/, /files/ENCFF108DXA/, /files/ENCFF356LFX/, /files/ENCFF339NUH/, /files/ENCFF691UEA/ 463922 ENCODE Processing Pipeline 5e5c8ea6b01a985f3099781d262682cc https://www.encodeproject.org/files/ENCFF053UZX/@@download/ENCFF053UZX.bed.gz released s3://encode-public/2021/01/05/08c4458f-6eec-45aa-ba4a-2160109c6b44/ENCFF053UZX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/05/08c4458f-6eec-45aa-ba4a-2160109c6b44/ENCFF053UZX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth ENCFF906KGM bigWig bigWig signal p-value GRCh38 ENCSR000BUF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CREB1-human DNA 2012-09-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF305BPN/, /files/ENCFF538DUT/, /files/ENCFF108DXA/, /files/ENCFF339NUH/, /files/ENCFF691UEA/ 1066079495 ENCODE Processing Pipeline 73d0762b4a664e7f31c584674b030a78 https://www.encodeproject.org/files/ENCFF906KGM/@@download/ENCFF906KGM.bigWig released s3://encode-public/2021/01/05/0386aeb5-f6b8-411a-b983-72c0d6226768/ENCFF906KGM.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/05/0386aeb5-f6b8-411a-b983-72c0d6226768/ENCFF906KGM.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth ENCFF870CVH bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BUF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CREB1-human DNA 2012-09-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF053UZX/ 800220 ENCODE Processing Pipeline 034224612ff0163968d84e20e8dd8fa7 https://www.encodeproject.org/files/ENCFF870CVH/@@download/ENCFF870CVH.bigBed released s3://encode-public/2021/01/05/994a990c-af82-4409-8b49-3b8df0b51ece/ENCFF870CVH.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/05/994a990c-af82-4409-8b49-3b8df0b51ece/ENCFF870CVH.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, low read depth ENCFF535WUH bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DNQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZZZ3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF818RMY/, /files/ENCFF562BLT/, /files/ENCFF356LFX/ 12322 ENCODE Processing Pipeline 4bf4cba3a17cfe0e2f08f9a1edab14f2 https://www.encodeproject.org/files/ENCFF535WUH/@@download/ENCFF535WUH.bed.gz released s3://encode-public/2020/12/11/decc63d9-1ec4-4596-988b-7637b4f60962/ENCFF535WUH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/decc63d9-1ec4-4596-988b-7637b4f60962/ENCFF535WUH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read depth insufficient read length, control insufficient read depth ENCFF917BTP bigWig bigWig signal p-value GRCh38 ENCSR000DNQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZZZ3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF818RMY/, /files/ENCFF562BLT/ 378218438 ENCODE Processing Pipeline 557b287e2fa5426fed101e57dcce6bda https://www.encodeproject.org/files/ENCFF917BTP/@@download/ENCFF917BTP.bigWig released s3://encode-public/2020/12/11/7d33c8e3-3986-4365-bacc-ec0efa09582b/ENCFF917BTP.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/7d33c8e3-3986-4365-bacc-ec0efa09582b/ENCFF917BTP.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read depth insufficient read length, control insufficient read depth ENCFF785CSD bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DNQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZZZ3-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF535WUH/ 64520 ENCODE Processing Pipeline fd1ce96e4115e169de7bc42027b45db0 https://www.encodeproject.org/files/ENCFF785CSD/@@download/ENCFF785CSD.bigBed released s3://encode-public/2020/12/11/9067d25e-cee4-4912-9037-f8d83fcbf419/ENCFF785CSD.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/9067d25e-cee4-4912-9037-f8d83fcbf419/ENCFF785CSD.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read depth insufficient read length, control insufficient read depth ENCFF151HGD bigWig bigWig signal p-value GRCh38 ENCSR000DZZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBP-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF309PEQ/, /files/ENCFF953XVQ/, /files/ENCFF863XTX/ 487343778 ENCODE Processing Pipeline cce2b1e9bb4cb177cacd3bf3646268c5 https://www.encodeproject.org/files/ENCFF151HGD/@@download/ENCFF151HGD.bigWig released s3://encode-public/2020/12/26/7d3d4916-9436-490c-b31e-674f4bfe6345/ENCFF151HGD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/7d3d4916-9436-490c-b31e-674f4bfe6345/ENCFF151HGD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF099PYR bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBP-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF309PEQ/, /files/ENCFF278NPZ/, /files/ENCFF356LFX/, /files/ENCFF953XVQ/, /files/ENCFF863XTX/ 354803 ENCODE Processing Pipeline e7d0bfc935ba5453c50d920421b4d90b https://www.encodeproject.org/files/ENCFF099PYR/@@download/ENCFF099PYR.bed.gz released s3://encode-public/2020/12/26/e3ab5ade-d4c5-47e2-911f-b20d506fb787/ENCFF099PYR.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/e3ab5ade-d4c5-47e2-911f-b20d506fb787/ENCFF099PYR.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF571OXR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TBP-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF099PYR/ 710556 ENCODE Processing Pipeline 67b9f5fb3b56e8481463f1bd346b4d8c https://www.encodeproject.org/files/ENCFF571OXR/@@download/ENCFF571OXR.bigBed released s3://encode-public/2020/12/26/56d95cf2-425a-4915-a8d5-d4c043aee938/ENCFF571OXR.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/56d95cf2-425a-4915-a8d5-d4c043aee938/ENCFF571OXR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF288BOI bigWig bigWig signal p-value GRCh38 ENCSR000BRU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOXM1-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF305BPN/, /files/ENCFF691UEA/, /files/ENCFF036UGG/, /files/ENCFF339NUH/, /files/ENCFF557JOT/ 1135411770 ENCODE Processing Pipeline 56aa1116d64c92ef7d39bed21757e54a https://www.encodeproject.org/files/ENCFF288BOI/@@download/ENCFF288BOI.bigWig released s3://encode-public/2020/12/27/4920dc4a-5d7f-4dd6-96dc-3fb7f5824289/ENCFF288BOI.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/4920dc4a-5d7f-4dd6-96dc-3fb7f5824289/ENCFF288BOI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking ENCFF549GKZ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOXM1-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF305BPN/, /files/ENCFF356LFX/, /files/ENCFF036UGG/, /files/ENCFF691UEA/, /files/ENCFF339NUH/, /files/ENCFF557JOT/ 410735 ENCODE Processing Pipeline 3c5a9a4cce0a00136771bbbedc9068ce https://www.encodeproject.org/files/ENCFF549GKZ/@@download/ENCFF549GKZ.bed.gz released s3://encode-public/2020/12/27/e0c05f1d-1ba5-42a0-af0d-e9e017c9505c/ENCFF549GKZ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/e0c05f1d-1ba5-42a0-af0d-e9e017c9505c/ENCFF549GKZ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking ENCFF264DJE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOXM1-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF549GKZ/ 817921 ENCODE Processing Pipeline 77f5e4b6c4755c589942bc4aac202acd https://www.encodeproject.org/files/ENCFF264DJE/@@download/ENCFF264DJE.bigBed released s3://encode-public/2020/12/27/94d01e35-dbcf-407b-8d99-cf011591f0cd/ENCFF264DJE.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/94d01e35-dbcf-407b-8d99-cf011591f0cd/ENCFF264DJE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking ENCFF032XEH bigWig bigWig signal p-value GRCh38 ENCSR000DZE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF772CEE/, /files/ENCFF042LWY/, /files/ENCFF863XTX/, /files/ENCFF278NPZ/, /files/ENCFF875MYH/ 661162937 ENCODE Processing Pipeline fd0c05c00231f9a8666b0e822e5918a0 https://www.encodeproject.org/files/ENCFF032XEH/@@download/ENCFF032XEH.bigWig released s3://encode-public/2021/01/08/7c86f472-290f-4978-a984-67a9714790de/ENCFF032XEH.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/7c86f472-290f-4978-a984-67a9714790de/ENCFF032XEH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF753HYW bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF772CEE/, /files/ENCFF042LWY/, /files/ENCFF863XTX/, /files/ENCFF356LFX/, /files/ENCFF278NPZ/, /files/ENCFF875MYH/ 110499 ENCODE Processing Pipeline 5adc0e6ab95b84d194f0d5a4dbe97204 https://www.encodeproject.org/files/ENCFF753HYW/@@download/ENCFF753HYW.bed.gz released s3://encode-public/2021/01/08/b4473ce2-5d43-455a-bf8a-d3c12ff66244/ENCFF753HYW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/b4473ce2-5d43-455a-bf8a-d3c12ff66244/ENCFF753HYW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF566UBH bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF753HYW/ 337758 ENCODE Processing Pipeline f739afa5c5d4a824b005e6fe26b4f46f https://www.encodeproject.org/files/ENCFF566UBH/@@download/ENCFF566UBH.bigBed released s3://encode-public/2021/01/08/f4f44f24-d04c-4200-b54c-f07d0a26d3b2/ENCFF566UBH.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/f4f44f24-d04c-4200-b54c-f07d0a26d3b2/ENCFF566UBH.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF629TLG bigWig bigWig signal p-value GRCh38 ENCSR000EAG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens tumor necrosis factor 25 ng/mL 6 hour RELA-human DNA 2012-05-14 ENCODE see document 1, 2, 3, 4 1_1, 2_1, 3_1, 4_1 /files/ENCFF921HNT/, /files/ENCFF334KCT/, /files/ENCFF151LGM/, /files/ENCFF061HHG/, /files/ENCFF900UXH/, /files/ENCFF186RVJ/ 435556522 ENCODE Processing Pipeline ad201db2ebebf83be6caf9964b0db226 https://www.encodeproject.org/files/ENCFF629TLG/@@download/ENCFF629TLG.bigWig released s3://encode-public/2021/01/05/e02d6b37-8422-4d44-b69d-9134cf2beb24/ENCFF629TLG.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/05/e02d6b37-8422-4d44-b69d-9134cf2beb24/ENCFF629TLG.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released insufficient read depth, insufficient read length, insufficient replicate concordance extremely low read depth ENCFF111QIX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EAG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens tumor necrosis factor 25 ng/mL 6 hour RELA-human DNA 2012-05-14 ENCODE see document 1, 2, 3, 4 1_1, 2_1, 3_1, 4_1 /files/ENCFF781YDP/ 684129 ENCODE Processing Pipeline 463f7b22f333eb9dfbddccfa8e1f4165 https://www.encodeproject.org/files/ENCFF111QIX/@@download/ENCFF111QIX.bigBed released s3://encode-public/2021/01/05/e9071b4a-6d05-4e09-a881-b340cf54e089/ENCFF111QIX.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/05/e9071b4a-6d05-4e09-a881-b340cf54e089/ENCFF111QIX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released insufficient read depth, insufficient read length, insufficient replicate concordance extremely low read depth ENCFF781YDP bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EAG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens tumor necrosis factor 25 ng/mL 6 hour RELA-human DNA 2012-05-14 ENCODE see document 1, 2, 3, 4 1_1, 2_1, 3_1, 4_1 /files/ENCFF921HNT/, /files/ENCFF356LFX/, /files/ENCFF334KCT/, /files/ENCFF151LGM/, /files/ENCFF061HHG/, /files/ENCFF900UXH/, /files/ENCFF186RVJ/ 323943 ENCODE Processing Pipeline 81d97378e363cab7b5141b47ff30e111 https://www.encodeproject.org/files/ENCFF781YDP/@@download/ENCFF781YDP.bed.gz released s3://encode-public/2021/01/05/1e0a9544-e080-400e-aa50-3e981bc9f879/ENCFF781YDP.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/05/1e0a9544-e080-400e-aa50-3e981bc9f879/ENCFF781YDP.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released insufficient read depth, insufficient read length, insufficient replicate concordance extremely low read depth ENCFF845CZS bigWig bigWig signal p-value GRCh38 ENCSR000BQS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens REST-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF019QRI/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF213EBE/, /files/ENCFF887ZNY/ 1051646951 ENCODE Processing Pipeline 24a3ea1135491b35e40f2b84d885c31c https://www.encodeproject.org/files/ENCFF845CZS/@@download/ENCFF845CZS.bigWig released s3://encode-public/2021/01/06/2c31cf65-69ca-44da-9c78-9c4bc70ab445/ENCFF845CZS.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/06/2c31cf65-69ca-44da-9c78-9c4bc70ab445/ENCFF845CZS.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF262MRD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens REST-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF019QRI/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF213EBE/, /files/ENCFF356LFX/, /files/ENCFF887ZNY/ 113770 ENCODE Processing Pipeline 65617da324c39e7e0845e9f0236d9f8d https://www.encodeproject.org/files/ENCFF262MRD/@@download/ENCFF262MRD.bed.gz released s3://encode-public/2021/01/06/288a7f52-3b75-4ec7-8667-d5ab9a557eae/ENCFF262MRD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/06/288a7f52-3b75-4ec7-8667-d5ab9a557eae/ENCFF262MRD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF943QPB bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens REST-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF262MRD/ 250011 ENCODE Processing Pipeline 911ec6d7c5e28d426e27ad94714803a2 https://www.encodeproject.org/files/ENCFF943QPB/@@download/ENCFF943QPB.bigBed released s3://encode-public/2021/01/06/24ac6978-09f9-4f5a-8752-b0e1a683c412/ENCFF943QPB.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/06/24ac6978-09f9-4f5a-8752-b0e1a683c412/ENCFF943QPB.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF847KZK bigWig bigWig signal p-value GRCh38 ENCSR000DRZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF430XCG/, /files/ENCFF794BPW/, /files/ENCFF159XTB/ 293962425 ENCODE Processing Pipeline 39944e89b845320cbe616f807e83abfb https://www.encodeproject.org/files/ENCFF847KZK/@@download/ENCFF847KZK.bigWig released s3://encode-public/2020/09/26/0b70e3fb-793d-4226-b1be-37edff3fcc35/ENCFF847KZK.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/09/26/0b70e3fb-793d-4226-b1be-37edff3fcc35/ENCFF847KZK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, control low read depth, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking extremely low read depth ENCFF485TGR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DRZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF951PEM/ 1211904 ENCODE Processing Pipeline 90083fc09548140b95b4a74ce23245f0 https://www.encodeproject.org/files/ENCFF485TGR/@@download/ENCFF485TGR.bigBed released s3://encode-public/2020/09/26/57d0d91e-7776-40b2-a625-07b2b5791ecb/ENCFF485TGR.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/09/26/57d0d91e-7776-40b2-a625-07b2b5791ecb/ENCFF485TGR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, control low read depth, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking extremely low read depth ENCFF951PEM bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DRZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF430XCG/, /files/ENCFF794BPW/, /files/ENCFF159XTB/, /files/ENCFF356LFX/ 663717 ENCODE Processing Pipeline 525be8908513d453017395a3a3eb46f6 https://www.encodeproject.org/files/ENCFF951PEM/@@download/ENCFF951PEM.bed.gz released s3://encode-public/2020/09/26/0519954c-9e63-4f21-9946-9d1fdfdd7fde/ENCFF951PEM.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/09/26/0519954c-9e63-4f21-9946-9d1fdfdd7fde/ENCFF951PEM.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, control low read depth, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking extremely low read depth ENCFF497DHP bigWig bigWig signal p-value GRCh38 ENCSR000BKB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF397MRM/, /files/ENCFF455VTM/ 423378433 ENCODE Processing Pipeline f063a9716316bec64f4fbe16b156eaf3 https://www.encodeproject.org/files/ENCFF497DHP/@@download/ENCFF497DHP.bigWig released s3://encode-public/2020/12/11/2f22e7b8-9f28-4f6b-8d2d-95055906b0e8/ENCFF497DHP.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/2f22e7b8-9f28-4f6b-8d2d-95055906b0e8/ENCFF497DHP.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth ENCFF826GQU bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BKB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF397MRM/, /files/ENCFF455VTM/, /files/ENCFF356LFX/ 375342 ENCODE Processing Pipeline fb1433bbc2079461c39f0dbf9ac49192 https://www.encodeproject.org/files/ENCFF826GQU/@@download/ENCFF826GQU.bed.gz released s3://encode-public/2020/12/11/eb6a713b-8ebf-406e-9d5d-04f5c26a303c/ENCFF826GQU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/eb6a713b-8ebf-406e-9d5d-04f5c26a303c/ENCFF826GQU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth ENCFF652BHX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BKB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF826GQU/ 673321 ENCODE Processing Pipeline e007ab3323cc856a7e7ee8af9635df4c https://www.encodeproject.org/files/ENCFF652BHX/@@download/ENCFF652BHX.bigBed released s3://encode-public/2020/12/11/787b79da-90b8-483e-b1ed-bec69bd71044/ENCFF652BHX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/787b79da-90b8-483e-b1ed-bec69bd71044/ENCFF652BHX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth ENCFF436SJS bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAFK-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF042LWY/, /files/ENCFF863XTX/, /files/ENCFF215TIO/, /files/ENCFF278NPZ/, /files/ENCFF683ICJ/, /files/ENCFF381MCA/ 135155 ENCODE Processing Pipeline f6021852cedf049968eb0469a65a226a https://www.encodeproject.org/files/ENCFF436SJS/@@download/ENCFF436SJS.bed.gz released s3://encode-public/2021/01/08/a771abce-d90f-41a5-8a1e-ea6e1f330826/ENCFF436SJS.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/a771abce-d90f-41a5-8a1e-ea6e1f330826/ENCFF436SJS.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment ENCFF189XAO bigWig bigWig signal p-value GRCh38 ENCSR000DYV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAFK-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF863XTX/, /files/ENCFF215TIO/, /files/ENCFF278NPZ/, /files/ENCFF683ICJ/, /files/ENCFF381MCA/ 608740475 ENCODE Processing Pipeline b6bf93f33efd039dd8cb4340670a4e51 https://www.encodeproject.org/files/ENCFF189XAO/@@download/ENCFF189XAO.bigWig released s3://encode-public/2021/01/08/4ec4ce2b-7cf7-4c9a-b6b9-9061fb1c7b95/ENCFF189XAO.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/4ec4ce2b-7cf7-4c9a-b6b9-9061fb1c7b95/ENCFF189XAO.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment ENCFF605LFT bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAFK-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF436SJS/ 281367 ENCODE Processing Pipeline a65f44f82e0505e0f6a1c950afb5c7c7 https://www.encodeproject.org/files/ENCFF605LFT/@@download/ENCFF605LFT.bigBed released s3://encode-public/2021/01/08/d402016e-7833-4a2d-be19-c95927be3ca2/ENCFF605LFT.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/d402016e-7833-4a2d-be19-c95927be3ca2/ENCFF605LFT.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment ENCFF822QJA bigWig bigWig signal p-value GRCh38 ENCSR000EAC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD21-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF644LKJ/, /files/ENCFF359ZRR/, /files/ENCFF042LWY/ 457900492 ENCODE Processing Pipeline 0a2b7ea4150bcd597467adbafaf76efe https://www.encodeproject.org/files/ENCFF822QJA/@@download/ENCFF822QJA.bigWig released s3://encode-public/2021/02/04/b9905f92-9d89-43b4-9391-7c26c157100d/ENCFF822QJA.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/b9905f92-9d89-43b4-9391-7c26c157100d/ENCFF822QJA.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth insufficient read length ENCFF834GOT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EAC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD21-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF042LWY/, /files/ENCFF359ZRR/, /files/ENCFF644LKJ/, /files/ENCFF683ICJ/ 576169 ENCODE Processing Pipeline 0edfbb44ab702e845e4225817f5f0512 https://www.encodeproject.org/files/ENCFF834GOT/@@download/ENCFF834GOT.bed.gz released s3://encode-public/2021/02/04/117f7355-9489-4240-88c4-08115044f9e0/ENCFF834GOT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/117f7355-9489-4240-88c4-08115044f9e0/ENCFF834GOT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth insufficient read length ENCFF046CBW bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EAC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD21-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF834GOT/ 1081207 ENCODE Processing Pipeline 4e52c1b88637381af7778ce3fb7b7a84 https://www.encodeproject.org/files/ENCFF046CBW/@@download/ENCFF046CBW.bigBed released s3://encode-public/2021/02/04/0224d850-92f8-4b7f-93b2-e7e146f6fe2d/ENCFF046CBW.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/0224d850-92f8-4b7f-93b2-e7e146f6fe2d/ENCFF046CBW.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth insufficient read length ENCFF111LSD bigWig bigWig signal p-value GRCh38 ENCSR000EUL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2C2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF364NDF/, /files/ENCFF658PBP/, /files/ENCFF760TLO/ 397093826 ENCODE Processing Pipeline 6648aa628725102ab2412f121f6f9e36 https://www.encodeproject.org/files/ENCFF111LSD/@@download/ENCFF111LSD.bigWig released s3://encode-public/2020/12/11/ff245315-fd67-40f7-b827-a47b43c66232/ENCFF111LSD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/ff245315-fd67-40f7-b827-a47b43c66232/ENCFF111LSD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth insufficient read length, control insufficient read depth ENCFF782KRV bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EUL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2C2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF364NDF/, /files/ENCFF658PBP/, /files/ENCFF760TLO/, /files/ENCFF356LFX/ 24877 ENCODE Processing Pipeline ae062987769fa3596c7e4aa6a03137e2 https://www.encodeproject.org/files/ENCFF782KRV/@@download/ENCFF782KRV.bed.gz released s3://encode-public/2020/12/11/95fe4994-7229-4973-b816-dab97d34eb76/ENCFF782KRV.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/95fe4994-7229-4973-b816-dab97d34eb76/ENCFF782KRV.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth insufficient read length, control insufficient read depth ENCFF550ARE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EUL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2C2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF782KRV/ 96616 ENCODE Processing Pipeline fd10fa08ed21683f10113fbad9462580 https://www.encodeproject.org/files/ENCFF550ARE/@@download/ENCFF550ARE.bigBed released s3://encode-public/2020/12/11/d5b05ef7-7de9-474e-879f-dbac8b03c1b8/ENCFF550ARE.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/d5b05ef7-7de9-474e-879f-dbac8b03c1b8/ENCFF550ARE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth insufficient read length, control insufficient read depth ENCFF803OXW bigWig bigWig signal p-value GRCh38 ENCSR000AKB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-02-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF355CYX/, /files/ENCFF453EJM/, /files/ENCFF066RCS/, /files/ENCFF850RIE/ 360525736 ENCODE Processing Pipeline 20ae0c79ad6ff0db9932a91e7759d5f8 https://www.encodeproject.org/files/ENCFF803OXW/@@download/ENCFF803OXW.bigWig released s3://encode-public/2020/10/01/5d44224e-0115-4d99-9d6c-87106c077526/ENCFF803OXW.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/10/01/5d44224e-0115-4d99-9d6c-87106c077526/ENCFF803OXW.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, control low read depth, low read depth, mixed read lengths, mild to moderate bottlenecking insufficient read depth, control insufficient read depth ENCFF217EAX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000AKB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-02-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF797SDL/ 1145526 ENCODE Processing Pipeline b138a98f4be50027037bb27f6ee3b238 https://www.encodeproject.org/files/ENCFF217EAX/@@download/ENCFF217EAX.bigBed released s3://encode-public/2020/10/01/447c8157-6c8c-4f74-8037-cb8e9937a1d1/ENCFF217EAX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/10/01/447c8157-6c8c-4f74-8037-cb8e9937a1d1/ENCFF217EAX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, control low read depth, low read depth, mixed read lengths, mild to moderate bottlenecking insufficient read depth, control insufficient read depth ENCFF797SDL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000AKB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-02-10 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF453EJM/, /files/ENCFF066RCS/, /files/ENCFF355CYX/, /files/ENCFF356LFX/, /files/ENCFF850RIE/ 666961 ENCODE Processing Pipeline 23e1af16bf43b8bcce0e034fd8ab2636 https://www.encodeproject.org/files/ENCFF797SDL/@@download/ENCFF797SDL.bed.gz released s3://encode-public/2020/10/01/312ba92e-ab0d-4c1a-b37a-1fe3d3f13f86/ENCFF797SDL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/10/01/312ba92e-ab0d-4c1a-b37a-1fe3d3f13f86/ENCFF797SDL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, control low read depth, low read depth, mixed read lengths, mild to moderate bottlenecking insufficient read depth, control insufficient read depth ENCFF168NSM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DKU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MYC-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF214XPD/ 214240 ENCODE Processing Pipeline 2358f11fd055ea4bbb35b8f18047859a https://www.encodeproject.org/files/ENCFF168NSM/@@download/ENCFF168NSM.bigBed released s3://encode-public/2020/12/11/0957a059-09e8-40b2-9e94-80815f474021/ENCFF168NSM.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/0957a059-09e8-40b2-9e94-80815f474021/ENCFF168NSM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, inconsistent platforms insufficient read depth, insufficient read length, severe bottlenecking, insufficient replicate concordance ENCFF829AJS bigWig bigWig signal p-value GRCh38 ENCSR000DKU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MYC-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF484MUV/, /files/ENCFF158NCR/, /files/ENCFF513EOH/ 276032383 ENCODE Processing Pipeline 170b02e101fce0c5a1427d636027172e https://www.encodeproject.org/files/ENCFF829AJS/@@download/ENCFF829AJS.bigWig released s3://encode-public/2020/12/11/8ff9310f-ffec-43f3-b96d-2e00934876e0/ENCFF829AJS.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/8ff9310f-ffec-43f3-b96d-2e00934876e0/ENCFF829AJS.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, inconsistent platforms insufficient read depth, insufficient read length, severe bottlenecking, insufficient replicate concordance ENCFF214XPD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DKU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MYC-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF484MUV/, /files/ENCFF158NCR/, /files/ENCFF513EOH/ 84936 ENCODE Processing Pipeline 0b7b6ca0d3c7f9e0a7c77a6ed0762c53 https://www.encodeproject.org/files/ENCFF214XPD/@@download/ENCFF214XPD.bed.gz released s3://encode-public/2020/12/11/18668182-71f0-4424-ad13-c12ba8d95bcc/ENCFF214XPD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/18668182-71f0-4424-ad13-c12ba8d95bcc/ENCFF214XPD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, inconsistent platforms insufficient read depth, insufficient read length, severe bottlenecking, insufficient replicate concordance ENCFF841CGX bigWig bigWig signal p-value GRCh38 ENCSR000BJE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SIX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF453CMC/, /files/ENCFF139TCV/, /files/ENCFF519KIS/ 843751591 ENCODE Processing Pipeline 49320e9c0ebcdf8b3caba0eb0f61b6ed https://www.encodeproject.org/files/ENCFF841CGX/@@download/ENCFF841CGX.bigWig released s3://encode-public/2020/12/28/a859a68a-ae56-4134-8b2c-6da14197d15b/ENCFF841CGX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/28/a859a68a-ae56-4134-8b2c-6da14197d15b/ENCFF841CGX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth severe bottlenecking ENCFF878FBM bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BJE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SIX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF356LFX/, /files/ENCFF453CMC/, /files/ENCFF139TCV/, /files/ENCFF519KIS/ 95110 ENCODE Processing Pipeline 5b966933f42f20f2691a0f3974466f57 https://www.encodeproject.org/files/ENCFF878FBM/@@download/ENCFF878FBM.bed.gz released s3://encode-public/2020/12/28/22def549-00c1-4544-a9ab-dfe60afb0bce/ENCFF878FBM.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/28/22def549-00c1-4544-a9ab-dfe60afb0bce/ENCFF878FBM.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth severe bottlenecking ENCFF766FEJ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BJE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SIX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF878FBM/ 225968 ENCODE Processing Pipeline 24292368c76bd603f453220648f5da81 https://www.encodeproject.org/files/ENCFF766FEJ/@@download/ENCFF766FEJ.bigBed released s3://encode-public/2020/12/28/aae5091a-01e6-412c-8d3f-b2ce9807d982/ENCFF766FEJ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/28/aae5091a-01e6-412c-8d3f-b2ce9807d982/ENCFF766FEJ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth severe bottlenecking ENCFF253CQW bigWig bigWig signal p-value GRCh38 ENCSR000BRG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EGR1-human DNA 2012-02-29 ENCODE see document 3 3_1 /files/ENCFF790YVI/, /files/ENCFF768KPY/, /files/ENCFF002PKP/ 521212662 ENCODE Processing Pipeline db8d7aa89be6de943ec53175e8754c1b https://www.encodeproject.org/files/ENCFF253CQW/@@download/ENCFF253CQW.bigWig released s3://encode-public/2020/12/11/25571e08-59df-4e94-bf4e-8a4b76846eab/ENCFF253CQW.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/25571e08-59df-4e94-bf4e-8a4b76846eab/ENCFF253CQW.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF612EIU bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EGR1-human DNA 2012-02-29 ENCODE see document 3 3_1 /files/ENCFF356LFX/, /files/ENCFF790YVI/, /files/ENCFF768KPY/, /files/ENCFF002PKP/ 45153 ENCODE Processing Pipeline f51af31298adc4f0dc3297f9f21d00ca https://www.encodeproject.org/files/ENCFF612EIU/@@download/ENCFF612EIU.bed.gz released s3://encode-public/2020/12/11/059b8a3f-434e-4114-9288-492204a218df/ENCFF612EIU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/059b8a3f-434e-4114-9288-492204a218df/ENCFF612EIU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF784ATC bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EGR1-human DNA 2012-02-29 ENCODE see document 3 3_1 /files/ENCFF612EIU/ 132852 ENCODE Processing Pipeline a8719931e4c2d6742303c4611c31f620 https://www.encodeproject.org/files/ENCFF784ATC/@@download/ENCFF784ATC.bigBed released s3://encode-public/2020/12/11/7083f1ba-2e87-441b-9cac-8255cc11b85a/ENCFF784ATC.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/7083f1ba-2e87-441b-9cac-8255cc11b85a/ENCFF784ATC.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF109AVQ bigWig bigWig signal p-value GRCh38 ENCSR000BGF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens REST-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF750IJA/, /files/ENCFF002PKP/, /files/ENCFF953VYL/, /files/ENCFF768KPY/ 622186402 ENCODE Processing Pipeline 7f436a01269112262f461e584af4c48f https://www.encodeproject.org/files/ENCFF109AVQ/@@download/ENCFF109AVQ.bigWig released s3://encode-public/2020/12/27/040bcc6b-effb-4dd8-81cc-ba64657a8f86/ENCFF109AVQ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/040bcc6b-effb-4dd8-81cc-ba64657a8f86/ENCFF109AVQ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mixed read lengths, low read length, low read depth insufficient read length ENCFF975LZF bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens REST-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF750IJA/, /files/ENCFF953VYL/, /files/ENCFF768KPY/, /files/ENCFF356LFX/, /files/ENCFF002PKP/ 106149 ENCODE Processing Pipeline 26ac1653222d2089ddc79e50c7bb7c6d https://www.encodeproject.org/files/ENCFF975LZF/@@download/ENCFF975LZF.bed.gz released s3://encode-public/2020/12/27/201010d6-7cc4-4d45-b52d-8126a9d086c3/ENCFF975LZF.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/201010d6-7cc4-4d45-b52d-8126a9d086c3/ENCFF975LZF.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mixed read lengths, low read length, low read depth insufficient read length ENCFF235NGC bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens REST-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF975LZF/ 248256 ENCODE Processing Pipeline 98bd76412e543a6c3d9210731ddae2c4 https://www.encodeproject.org/files/ENCFF235NGC/@@download/ENCFF235NGC.bigBed released s3://encode-public/2020/12/27/b452aee4-3263-49bb-8ce9-6bfc158d64b2/ENCFF235NGC.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/b452aee4-3263-49bb-8ce9-6bfc158d64b2/ENCFF235NGC.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mixed read lengths, low read length, low read depth insufficient read length ENCFF192WNJ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF882OBA/, /files/ENCFF075XYL/, /files/ENCFF519KIS/, /files/ENCFF326CHD/, /files/ENCFF356LFX/, /files/ENCFF559TUN/ 396838 ENCODE Processing Pipeline 866bbfb6db56f046bf0d0c0226b49277 https://www.encodeproject.org/files/ENCFF192WNJ/@@download/ENCFF192WNJ.bed.gz released s3://encode-public/2020/12/27/35cd6098-7999-4601-9ad2-1db3d5520017/ENCFF192WNJ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/35cd6098-7999-4601-9ad2-1db3d5520017/ENCFF192WNJ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, low read depth ENCFF886UGF bigWig bigWig signal p-value GRCh38 ENCSR000BHJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF882OBA/, /files/ENCFF075XYL/, /files/ENCFF519KIS/, /files/ENCFF326CHD/, /files/ENCFF559TUN/ 907362401 ENCODE Processing Pipeline 9f88c5ba26eb111a66fe09c6943ad978 https://www.encodeproject.org/files/ENCFF886UGF/@@download/ENCFF886UGF.bigWig released s3://encode-public/2020/12/27/714aa1c1-9690-4289-9b27-a0883eca5d77/ENCFF886UGF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/714aa1c1-9690-4289-9b27-a0883eca5d77/ENCFF886UGF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, low read depth ENCFF503GOV bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF192WNJ/ 712436 ENCODE Processing Pipeline 2cd6e4ecfb25e5e3288bf39396ed4f2f https://www.encodeproject.org/files/ENCFF503GOV/@@download/ENCFF503GOV.bigBed released s3://encode-public/2020/12/27/2909737a-d124-464a-9de0-ab712264ad91/ENCFF503GOV.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/2909737a-d124-464a-9de0-ab712264ad91/ENCFF503GOV.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, low read depth ENCFF833GJC bigWig bigWig signal p-value GRCh38 ENCSR000DYR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CUX1-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF902QSY/, /files/ENCFF863XTX/, /files/ENCFF040UPE/ 426927034 ENCODE Processing Pipeline 428317d6f5a0635aa158893c3625a02d https://www.encodeproject.org/files/ENCFF833GJC/@@download/ENCFF833GJC.bigWig released s3://encode-public/2020/12/26/750b76ab-a331-463f-8f46-c7ce19c4e6a6/ENCFF833GJC.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/750b76ab-a331-463f-8f46-c7ce19c4e6a6/ENCFF833GJC.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth insufficient replicate concordance ENCFF451AII bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CUX1-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF863XTX/, /files/ENCFF902QSY/, /files/ENCFF040UPE/, /files/ENCFF356LFX/ 137557 ENCODE Processing Pipeline ac06c81de51c9e1cbc26954bba14e245 https://www.encodeproject.org/files/ENCFF451AII/@@download/ENCFF451AII.bed.gz released s3://encode-public/2020/12/26/b942ab8e-45ba-4ac2-8921-edea1da597b5/ENCFF451AII.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/b942ab8e-45ba-4ac2-8921-edea1da597b5/ENCFF451AII.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth insufficient replicate concordance ENCFF064TOM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CUX1-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF451AII/ 347290 ENCODE Processing Pipeline a7c9e1c262f9b08c6b3ba186b2623b6c https://www.encodeproject.org/files/ENCFF064TOM/@@download/ENCFF064TOM.bigBed released s3://encode-public/2020/12/26/8bc0e28d-00ff-4174-be63-6e89192c66f7/ENCFF064TOM.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/8bc0e28d-00ff-4174-be63-6e89192c66f7/ENCFF064TOM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth insufficient replicate concordance ENCFF506WWB bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF12-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF068YYR/ 761572 ENCODE Processing Pipeline f9530b3553c2e5db414c14adf93c0486 https://www.encodeproject.org/files/ENCFF506WWB/@@download/ENCFF506WWB.bigBed released s3://encode-public/2020/12/26/9a8fc48a-f0ff-4c73-9ec3-0ca965e6fbce/ENCFF506WWB.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/9a8fc48a-f0ff-4c73-9ec3-0ca965e6fbce/ENCFF506WWB.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF429EUS bigWig bigWig signal p-value GRCh38 ENCSR000BGZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF12-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF230UAD/, /files/ENCFF361TMF/, /files/ENCFF882OBA/ 927423235 ENCODE Processing Pipeline ac0a236dd676927a78db2802aee04e72 https://www.encodeproject.org/files/ENCFF429EUS/@@download/ENCFF429EUS.bigWig released s3://encode-public/2020/12/26/83eb85e6-0483-42cd-8a0c-6a79b5b97317/ENCFF429EUS.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/83eb85e6-0483-42cd-8a0c-6a79b5b97317/ENCFF429EUS.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF068YYR bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF12-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF230UAD/, /files/ENCFF361TMF/, /files/ENCFF882OBA/ 425740 ENCODE Processing Pipeline 341da336fa69b2964c41458250111dbd https://www.encodeproject.org/files/ENCFF068YYR/@@download/ENCFF068YYR.bed.gz released s3://encode-public/2020/12/26/334de9b7-eaca-41ed-b2e2-21f96950b829/ENCFF068YYR.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/334de9b7-eaca-41ed-b2e2-21f96950b829/ENCFF068YYR.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF050XKK bigWig bigWig signal p-value GRCh38 ENCSR000DZO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NRF1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF951GZL/, /files/ENCFF588FQW/, /files/ENCFF278NPZ/, /files/ENCFF863XTX/ 453065316 ENCODE Processing Pipeline b849fc9ca20937b3b1bb41a4ac9e6da2 https://www.encodeproject.org/files/ENCFF050XKK/@@download/ENCFF050XKK.bigWig released s3://encode-public/2021/01/02/22f16e96-4a02-407f-b519-2c9777c75c3d/ENCFF050XKK.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/02/22f16e96-4a02-407f-b519-2c9777c75c3d/ENCFF050XKK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment, low read depth ENCFF864EBU bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR000DZO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NRF1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF951GZL/, /files/ENCFF863XTX/, /files/ENCFF278NPZ/, /files/ENCFF588FQW/ 88464 ENCODE Processing Pipeline a96729b87b33ce4ed0bee369f6fa96a1 https://www.encodeproject.org/files/ENCFF864EBU/@@download/ENCFF864EBU.bed.gz released s3://encode-public/2021/01/02/7627d234-82b3-4acc-bc71-7137395c1a5e/ENCFF864EBU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/02/7627d234-82b3-4acc-bc71-7137395c1a5e/ENCFF864EBU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment, low read depth ENCFF969FRH bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR000DZO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NRF1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF864EBU/ 197002 ENCODE Processing Pipeline c83ff021bcd0951a167a73c8bce3069e https://www.encodeproject.org/files/ENCFF969FRH/@@download/ENCFF969FRH.bigBed released s3://encode-public/2021/01/02/e9038099-04a3-4ee1-b2c9-31bc381b74c8/ENCFF969FRH.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/02/e9038099-04a3-4ee1-b2c9-31bc381b74c8/ENCFF969FRH.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment, low read depth ENCFF194VQV bigWig bigWig signal p-value GRCh38 ENCSR000BHK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SP1-human DNA 2011-07-18 ENCODE see document 2 2_1 /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF720DEB/, /files/ENCFF882OBA/ 807882552 ENCODE Processing Pipeline c2a643d236e5b5a21330a76c3c012ea1 https://www.encodeproject.org/files/ENCFF194VQV/@@download/ENCFF194VQV.bigWig released s3://encode-public/2020/12/27/9ad9de70-4edc-4e2b-90c9-b4b0f04eb927/ENCFF194VQV.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/9ad9de70-4edc-4e2b-90c9-b4b0f04eb927/ENCFF194VQV.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF038AVV bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SP1-human DNA 2011-07-18 ENCODE see document 2 2_1 /files/ENCFF720DEB/, /files/ENCFF356LFX/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF519KIS/ 257718 ENCODE Processing Pipeline fcca7ded01c938e22699c9a4cc127f56 https://www.encodeproject.org/files/ENCFF038AVV/@@download/ENCFF038AVV.bed.gz released s3://encode-public/2021/01/18/d91b896a-c95e-4338-832e-922b9c7e0af0/ENCFF038AVV.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/18/d91b896a-c95e-4338-832e-922b9c7e0af0/ENCFF038AVV.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF620LDJ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SP1-human DNA 2011-07-18 ENCODE see document 2 2_1 /files/ENCFF038AVV/ 515317 ENCODE Processing Pipeline 7f4f394529d991ed6afe94bbdfacb781 https://www.encodeproject.org/files/ENCFF620LDJ/@@download/ENCFF620LDJ.bigBed released s3://encode-public/2021/01/18/c690697b-f60b-4d13-a196-2b02985738a6/ENCFF620LDJ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/18/c690697b-f60b-4d13-a196-2b02985738a6/ENCFF620LDJ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF351VXQ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF863XTX/, /files/ENCFF356LFX/, /files/ENCFF352GMP/, /files/ENCFF042LWY/, /files/ENCFF278NPZ/, /files/ENCFF752ISM/ 348232 ENCODE Processing Pipeline dddbeafa7154b75f926238811046f9cb https://www.encodeproject.org/files/ENCFF351VXQ/@@download/ENCFF351VXQ.bed.gz released s3://encode-public/2021/01/08/220e943c-3aa7-4048-8da1-84c3467ce0e2/ENCFF351VXQ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/220e943c-3aa7-4048-8da1-84c3467ce0e2/ENCFF351VXQ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, improper control_type of control experiment, low read depth ENCFF697XCL bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF351VXQ/ 742135 ENCODE Processing Pipeline 567bdf3c06045263b34320feab7650e4 https://www.encodeproject.org/files/ENCFF697XCL/@@download/ENCFF697XCL.bigBed released s3://encode-public/2021/01/08/6d0574d9-e1a1-413c-b08a-85987188d28f/ENCFF697XCL.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/6d0574d9-e1a1-413c-b08a-85987188d28f/ENCFF697XCL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, improper control_type of control experiment, low read depth ENCFF062UPJ bigWig bigWig signal p-value GRCh38 ENCSR000DZR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CHD2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF863XTX/, /files/ENCFF352GMP/, /files/ENCFF042LWY/, /files/ENCFF278NPZ/, /files/ENCFF752ISM/ 704958136 ENCODE Processing Pipeline 443ae73ea17948361d3ab74535a8cd4f https://www.encodeproject.org/files/ENCFF062UPJ/@@download/ENCFF062UPJ.bigWig released s3://encode-public/2021/01/08/abfb5f0f-c26e-4d56-b4d5-9eda0f3c0786/ENCFF062UPJ.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/abfb5f0f-c26e-4d56-b4d5-9eda0f3c0786/ENCFF062UPJ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read length, improper control_type of control experiment, low read depth ENCFF644HXX bigWig bigWig signal p-value GRCh38 ENCSR000BQM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PML-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691UEA/, /files/ENCFF161WUT/, /files/ENCFF305BPN/, /files/ENCFF826GVL/, /files/ENCFF339NUH/ 1118186208 ENCODE Processing Pipeline e9a5f0278090325cff4287bff654abb1 https://www.encodeproject.org/files/ENCFF644HXX/@@download/ENCFF644HXX.bigWig released s3://encode-public/2021/01/05/b930b41c-9428-4f2c-a8fe-406b40bae7fb/ENCFF644HXX.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/05/b930b41c-9428-4f2c-a8fe-406b40bae7fb/ENCFF644HXX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF242KVU bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PML-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691UEA/, /files/ENCFF161WUT/, /files/ENCFF305BPN/, /files/ENCFF356LFX/, /files/ENCFF826GVL/, /files/ENCFF339NUH/ 359652 ENCODE Processing Pipeline c0d0211e1fdd6e4b4a829d6c6d9a384d https://www.encodeproject.org/files/ENCFF242KVU/@@download/ENCFF242KVU.bed.gz released s3://encode-public/2021/01/05/1e2c5ba8-896c-4315-bee8-cbf738f515ab/ENCFF242KVU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/05/1e2c5ba8-896c-4315-bee8-cbf738f515ab/ENCFF242KVU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF160JQZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PML-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF242KVU/ 816992 ENCODE Processing Pipeline 16666a562db6f133c4dd8c503ee1b2b9 https://www.encodeproject.org/files/ENCFF160JQZ/@@download/ENCFF160JQZ.bigBed released s3://encode-public/2021/01/05/a8f20afe-491f-4409-9c04-7cbcf9a15108/ENCFF160JQZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/05/a8f20afe-491f-4409-9c04-7cbcf9a15108/ENCFF160JQZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF404CEP bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAZ-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF467VSF/ 840248 ENCODE Processing Pipeline 3236d863a5e76275048bf592e1a5184b https://www.encodeproject.org/files/ENCFF404CEP/@@download/ENCFF404CEP.bigBed released s3://encode-public/2021/01/08/a188b847-a2e6-4377-a6cc-7795b104116e/ENCFF404CEP.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/a188b847-a2e6-4377-a6cc-7795b104116e/ENCFF404CEP.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment ENCFF467VSF bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAZ-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF356LFX/, /files/ENCFF278NPZ/, /files/ENCFF033QCU/, /files/ENCFF042LWY/, /files/ENCFF910KYB/ 421606 ENCODE Processing Pipeline de016aed3833935ccdf2962b36ae2e0f https://www.encodeproject.org/files/ENCFF467VSF/@@download/ENCFF467VSF.bed.gz released s3://encode-public/2021/01/08/f35f3fe1-6f8b-4905-ba69-97cbc675cf81/ENCFF467VSF.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/f35f3fe1-6f8b-4905-ba69-97cbc675cf81/ENCFF467VSF.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment ENCFF998ADI bigWig bigWig signal p-value GRCh38 ENCSR000DZA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAZ-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF278NPZ/, /files/ENCFF033QCU/, /files/ENCFF042LWY/, /files/ENCFF910KYB/ 858519428 ENCODE Processing Pipeline ffcae0362f2f54eaab8b61b1cd546b9b https://www.encodeproject.org/files/ENCFF998ADI/@@download/ENCFF998ADI.bigWig released s3://encode-public/2021/01/08/f8241acd-6f38-4862-8d3b-e1957c10b0fd/ENCFF998ADI.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/f8241acd-6f38-4862-8d3b-e1957c10b0fd/ENCFF998ADI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment ENCFF128WKR bigWig bigWig signal p-value GRCh38 ENCSR000BRN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFIC-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691UEA/, /files/ENCFF777TDW/, /files/ENCFF339NUH/, /files/ENCFF030EDP/, /files/ENCFF305BPN/ 1186880789 ENCODE Processing Pipeline a437dfd8642e65b8a4d5086e943672d6 https://www.encodeproject.org/files/ENCFF128WKR/@@download/ENCFF128WKR.bigWig released s3://encode-public/2020/12/27/8c1dd8b5-9384-4db9-be6e-208ea05f1bbc/ENCFF128WKR.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/8c1dd8b5-9384-4db9-be6e-208ea05f1bbc/ENCFF128WKR.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking ENCFF980SDE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFIC-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691UEA/, /files/ENCFF777TDW/, /files/ENCFF356LFX/, /files/ENCFF339NUH/, /files/ENCFF030EDP/, /files/ENCFF305BPN/ 654290 ENCODE Processing Pipeline 156503b1192c93926a313e449ca316d6 https://www.encodeproject.org/files/ENCFF980SDE/@@download/ENCFF980SDE.bed.gz released s3://encode-public/2020/12/27/881d8a98-0dcd-4deb-9987-acb95a322aa4/ENCFF980SDE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/881d8a98-0dcd-4deb-9987-acb95a322aa4/ENCFF980SDE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking ENCFF259FWL bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFIC-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF980SDE/ 1452277 ENCODE Processing Pipeline 2c36676cfb57968928f66ab5a25e8cac https://www.encodeproject.org/files/ENCFF259FWL/@@download/ENCFF259FWL.bigBed released s3://encode-public/2020/12/27/a4c34ba3-24cc-4a70-a1af-33e6de70e042/ENCFF259FWL.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/a4c34ba3-24cc-4a70-a1af-33e6de70e042/ENCFF259FWL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, inconsistent platforms, low read depth, mild to moderate bottlenecking ENCFF389SRN bigWig bigWig signal p-value GRCh38 ENCSR000DZQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EBF1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF865TBQ/, /files/ENCFF560OWG/ 379246461 ENCODE Processing Pipeline 8d6cf770f5670628b30a2e0321ec1621 https://www.encodeproject.org/files/ENCFF389SRN/@@download/ENCFF389SRN.bigWig released s3://encode-public/2020/12/26/f1671f5c-55df-40c0-a5c1-af46ab087abe/ENCFF389SRN.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/f1671f5c-55df-40c0-a5c1-af46ab087abe/ENCFF389SRN.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF167CZS bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EBF1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF996MFL/ 1304210 ENCODE Processing Pipeline b5acb7409edb09b692da041aac8c7b4c https://www.encodeproject.org/files/ENCFF167CZS/@@download/ENCFF167CZS.bigBed released s3://encode-public/2020/12/26/9e151d63-60df-402a-82be-f94a50dd7533/ENCFF167CZS.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/9e151d63-60df-402a-82be-f94a50dd7533/ENCFF167CZS.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF996MFL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EBF1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF865TBQ/, /files/ENCFF560OWG/, /files/ENCFF658PBP/ 670329 ENCODE Processing Pipeline 2a6ae1ae9558db612c404a483ba08f34 https://www.encodeproject.org/files/ENCFF996MFL/@@download/ENCFF996MFL.bed.gz released s3://encode-public/2020/12/26/de033be9-2c66-4348-bacb-1b8305011b9e/ENCFF996MFL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/de033be9-2c66-4348-bacb-1b8305011b9e/ENCFF996MFL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth control insufficient read depth ENCFF361EVH bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAX-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF278NPZ/, /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF456EJZ/, /files/ENCFF356LFX/, /files/ENCFF883PZJ/ 239736 ENCODE Processing Pipeline ad902946a10c59664a1bf80e3dd41821 https://www.encodeproject.org/files/ENCFF361EVH/@@download/ENCFF361EVH.bed.gz released s3://encode-public/2021/01/08/ce23de71-744e-4e4b-9d2a-a5c4b737747e/ENCFF361EVH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/ce23de71-744e-4e4b-9d2a-a5c4b737747e/ENCFF361EVH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF849VCQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAX-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF361EVH/ 546399 ENCODE Processing Pipeline b6227fda79d2108a01c3d504f320f17b https://www.encodeproject.org/files/ENCFF849VCQ/@@download/ENCFF849VCQ.bigBed released s3://encode-public/2021/01/08/e735fc93-cbd5-42df-9203-7b2afd7e09b5/ENCFF849VCQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/e735fc93-cbd5-42df-9203-7b2afd7e09b5/ENCFF849VCQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF167ECI bigWig bigWig signal p-value GRCh38 ENCSR000DZF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MAX-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF278NPZ/, /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF456EJZ/, /files/ENCFF883PZJ/ 604443082 ENCODE Processing Pipeline c6015bcfe4b89ee9435144e0e522d807 https://www.encodeproject.org/files/ENCFF167ECI/@@download/ENCFF167ECI.bigWig released s3://encode-public/2021/01/08/321f7706-8568-4047-a1e4-93d6c5c39051/ENCFF167ECI.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/321f7706-8568-4047-a1e4-93d6c5c39051/ENCFF167ECI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF303GOQ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BRCA1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF356LFX/, /files/ENCFF455IBT/, /files/ENCFF683ICJ/, /files/ENCFF278NPZ/, /files/ENCFF912ING/, /files/ENCFF863XTX/ 30228 ENCODE Processing Pipeline f036889f4ee1332e03f6d9bd307144fc https://www.encodeproject.org/files/ENCFF303GOQ/@@download/ENCFF303GOQ.bed.gz released s3://encode-public/2021/01/08/e567975a-02e3-4887-b272-c197d6fabe21/ENCFF303GOQ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/e567975a-02e3-4887-b272-c197d6fabe21/ENCFF303GOQ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF402YEA bigWig bigWig signal p-value GRCh38 ENCSR000DZS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BRCA1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF455IBT/, /files/ENCFF683ICJ/, /files/ENCFF278NPZ/, /files/ENCFF912ING/, /files/ENCFF863XTX/ 686057466 ENCODE Processing Pipeline eefdfb2f3ffe82390688ec48949b9b62 https://www.encodeproject.org/files/ENCFF402YEA/@@download/ENCFF402YEA.bigWig released s3://encode-public/2021/01/08/4d787f10-cce8-4136-989c-efe72876457a/ENCFF402YEA.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/4d787f10-cce8-4136-989c-efe72876457a/ENCFF402YEA.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF082DLE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BRCA1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF303GOQ/ 92347 ENCODE Processing Pipeline 9d4fddd7596c6367f1b466099c7d4b9b https://www.encodeproject.org/files/ENCFF082DLE/@@download/ENCFF082DLE.bigBed released s3://encode-public/2021/01/08/e5ddff7e-db4a-42f4-863d-2f7e3514090e/ENCFF082DLE.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/e5ddff7e-db4a-42f4-863d-2f7e3514090e/ENCFF082DLE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF565AWY bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BMI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF114CWH/ 470147 ENCODE Processing Pipeline 4324e18c618593238f4882cadd5ca06d https://www.encodeproject.org/files/ENCFF565AWY/@@download/ENCFF565AWY.bigBed released s3://encode-public/2020/12/27/606ca3d3-e30d-45d4-a3c2-4068cd271728/ENCFF565AWY.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/606ca3d3-e30d-45d4-a3c2-4068cd271728/ENCFF565AWY.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF114CWH bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BMI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF335DZU/, /files/ENCFF356LFX/, /files/ENCFF554UVL/, /files/ENCFF175YWG/ 219196 ENCODE Processing Pipeline f66186a248fbe745c449b86133212671 https://www.encodeproject.org/files/ENCFF114CWH/@@download/ENCFF114CWH.bed.gz released s3://encode-public/2020/12/27/fd6558d0-ec09-4961-bb2e-a1d83fb8a5d9/ENCFF114CWH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/fd6558d0-ec09-4961-bb2e-a1d83fb8a5d9/ENCFF114CWH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF042HPQ bigWig bigWig signal p-value GRCh38 ENCSR000BMI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF335DZU/, /files/ENCFF554UVL/, /files/ENCFF175YWG/ 600153464 ENCODE Processing Pipeline 5917791e4c2f463118f817df414e0e2b https://www.encodeproject.org/files/ENCFF042HPQ/@@download/ENCFF042HPQ.bigWig released s3://encode-public/2020/12/27/c61f411f-061b-426f-bab2-a992f3073853/ENCFF042HPQ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/c61f411f-061b-426f-bab2-a992f3073853/ENCFF042HPQ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF840IFX bigWig bigWig signal p-value GRCh38 ENCSR000DZM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF683ICJ/, /files/ENCFF151XBJ/, /files/ENCFF377CVY/, /files/ENCFF658PBP/ 652889855 ENCODE Processing Pipeline c6c9f71e29cc48d22c46d6b54b65ea2f https://www.encodeproject.org/files/ENCFF840IFX/@@download/ENCFF840IFX.bigWig released s3://encode-public/2021/01/08/c6afd959-3124-47f7-ab4d-fe4d223224fb/ENCFF840IFX.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/c6afd959-3124-47f7-ab4d-fe4d223224fb/ENCFF840IFX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF896SEI bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF042LWY/, /files/ENCFF151XBJ/, /files/ENCFF683ICJ/, /files/ENCFF377CVY/, /files/ENCFF356LFX/, /files/ENCFF658PBP/ 73807 ENCODE Processing Pipeline 508a5736089bed4cecb974c4085e5ddf https://www.encodeproject.org/files/ENCFF896SEI/@@download/ENCFF896SEI.bed.gz released s3://encode-public/2021/01/08/f5ee46ac-8459-4715-a9ed-4c542aaa789e/ENCFF896SEI.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/f5ee46ac-8459-4715-a9ed-4c542aaa789e/ENCFF896SEI.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF887ZLZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT1-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF896SEI/ 193667 ENCODE Processing Pipeline 29329d477d6b8db539fed6222e02e6ff https://www.encodeproject.org/files/ENCFF887ZLZ/@@download/ENCFF887ZLZ.bigBed released s3://encode-public/2021/01/08/7aaa2825-43b4-4f21-be85-19008e0ceadb/ENCFF887ZLZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/7aaa2825-43b4-4f21-be85-19008e0ceadb/ENCFF887ZLZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF686FAA bigWig bigWig signal p-value GRCh38 ENCSR000BKA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETS1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356DMQ/, /files/ENCFF849IMG/, /files/ENCFF554UVL/ 513694071 ENCODE Processing Pipeline d68264f1acccc664ecedff75b7a8d6a4 https://www.encodeproject.org/files/ENCFF686FAA/@@download/ENCFF686FAA.bigWig released s3://encode-public/2020/12/28/29b989b0-2c41-4e8f-a9ed-d7b3540ec86c/ENCFF686FAA.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/28/29b989b0-2c41-4e8f-a9ed-d7b3540ec86c/ENCFF686FAA.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF568AZT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BKA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETS1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356DMQ/, /files/ENCFF356LFX/, /files/ENCFF849IMG/, /files/ENCFF554UVL/ 224244 ENCODE Processing Pipeline ca5112bdd32ecd305228f6a3e7f94b77 https://www.encodeproject.org/files/ENCFF568AZT/@@download/ENCFF568AZT.bed.gz released s3://encode-public/2020/12/28/2dbeab07-24de-4fc6-93af-2a6299798a2a/ENCFF568AZT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/28/2dbeab07-24de-4fc6-93af-2a6299798a2a/ENCFF568AZT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF019FEB bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BKA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETS1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF568AZT/ 444550 ENCODE Processing Pipeline 347b41338b7f2e8eac5a4a2bb099df63 https://www.encodeproject.org/files/ENCFF019FEB/@@download/ENCFF019FEB.bigBed released s3://encode-public/2020/12/28/7a3fa347-b1ca-45c7-ab14-720ee72596be/ENCFF019FEB.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/28/7a3fa347-b1ca-45c7-ab14-720ee72596be/ENCFF019FEB.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF870BDD bigWig bigWig signal p-value GRCh38 ENCSR000BQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFATC1-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691UEA/, /files/ENCFF097KZM/, /files/ENCFF305BPN/, /files/ENCFF339NUH/, /files/ENCFF397DKO/ 1089265989 ENCODE Processing Pipeline 335cb5b0463c90b4e0fa25dfe7e3476a https://www.encodeproject.org/files/ENCFF870BDD/@@download/ENCFF870BDD.bigWig released s3://encode-public/2020/12/27/4f002476-aac8-49c1-9343-fb7545ea8e23/ENCFF870BDD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/4f002476-aac8-49c1-9343-fb7545ea8e23/ENCFF870BDD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF023CAZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFATC1-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF172KBM/ 511381 ENCODE Processing Pipeline 705de464ff73969b0b5d85d7fd9cddc9 https://www.encodeproject.org/files/ENCFF023CAZ/@@download/ENCFF023CAZ.bigBed released s3://encode-public/2020/12/27/65988f5e-4738-41c4-99d6-bfc4dbb65204/ENCFF023CAZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/65988f5e-4738-41c4-99d6-bfc4dbb65204/ENCFF023CAZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF172KBM bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFATC1-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691UEA/, /files/ENCFF097KZM/, /files/ENCFF356LFX/, /files/ENCFF305BPN/, /files/ENCFF339NUH/, /files/ENCFF397DKO/ 229829 ENCODE Processing Pipeline 20e41e6d0bcc8b8874cc9c7f46ff4de2 https://www.encodeproject.org/files/ENCFF172KBM/@@download/ENCFF172KBM.bed.gz released s3://encode-public/2020/12/27/8c3c2d1b-57f7-441f-adf0-5d1cd1824a4d/ENCFF172KBM.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/8c3c2d1b-57f7-441f-adf0-5d1cd1824a4d/ENCFF172KBM.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF065BWB bigWig bigWig signal p-value GRCh38 ENCSR000BNQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCL3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF629LEU/, /files/ENCFF935PCD/ 488125822 ENCODE Processing Pipeline 8918fdf9d5d2ba9de7844e771f556c09 https://www.encodeproject.org/files/ENCFF065BWB/@@download/ENCFF065BWB.bigWig released s3://encode-public/2020/12/27/411aaeb4-fbdb-4658-90dc-abe6a909a6db/ENCFF065BWB.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/411aaeb4-fbdb-4658-90dc-abe6a909a6db/ENCFF065BWB.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth, severe bottlenecking, poor library complexity ENCFF452NTN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BNQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCL3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF629LEU/, /files/ENCFF356LFX/, /files/ENCFF935PCD/ 365852 ENCODE Processing Pipeline 618b725311c0cc1805ca7f24bd4ed159 https://www.encodeproject.org/files/ENCFF452NTN/@@download/ENCFF452NTN.bed.gz released s3://encode-public/2020/12/27/567a67e8-9b25-4f92-a5f9-de82af298ab7/ENCFF452NTN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/567a67e8-9b25-4f92-a5f9-de82af298ab7/ENCFF452NTN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth, severe bottlenecking, poor library complexity ENCFF854PAY bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BNQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCL3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF452NTN/ 763181 ENCODE Processing Pipeline 164c6ad01ae1f13fb5e2f427aaa46ec7 https://www.encodeproject.org/files/ENCFF854PAY/@@download/ENCFF854PAY.bigBed released s3://encode-public/2020/12/27/18a24ffe-163c-43c8-b7db-d5c16fc5aa3d/ENCFF854PAY.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/18a24ffe-163c-43c8-b7db-d5c16fc5aa3d/ENCFF854PAY.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth, severe bottlenecking, poor library complexity ENCFF119COY bigWig bigWig signal p-value GRCh38 ENCSR000BQZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT5A-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691UEA/, /files/ENCFF305BPN/, /files/ENCFF870NMW/, /files/ENCFF548BLU/, /files/ENCFF339NUH/ 1180536688 ENCODE Processing Pipeline b035da1008c7b3fa9d808695cb86056b https://www.encodeproject.org/files/ENCFF119COY/@@download/ENCFF119COY.bigWig released s3://encode-public/2020/12/28/b4fc27f0-8c2d-4f88-a34c-8c4c7a6e73f4/ENCFF119COY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/28/b4fc27f0-8c2d-4f88-a34c-8c4c7a6e73f4/ENCFF119COY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF006GSY bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT5A-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691UEA/, /files/ENCFF356LFX/, /files/ENCFF305BPN/, /files/ENCFF870NMW/, /files/ENCFF548BLU/, /files/ENCFF339NUH/ 153690 ENCODE Processing Pipeline b5cba122ab663edf3b71b061768ec75b https://www.encodeproject.org/files/ENCFF006GSY/@@download/ENCFF006GSY.bed.gz released s3://encode-public/2020/12/28/5e30b001-0555-4da1-a188-46929a110454/ENCFF006GSY.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/28/5e30b001-0555-4da1-a188-46929a110454/ENCFF006GSY.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF267JUM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BQZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT5A-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF006GSY/ 365990 ENCODE Processing Pipeline dc185e0c24dbcd29a9eeedf84458ea26 https://www.encodeproject.org/files/ENCFF267JUM/@@download/ENCFF267JUM.bigBed released s3://encode-public/2020/12/28/5a24e61a-7a42-429c-ad45-03c12edbf80f/ENCFF267JUM.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/28/5a24e61a-7a42-429c-ad45-03c12edbf80f/ENCFF267JUM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms ENCFF485QCZ bigWig bigWig signal p-value GRCh38 ENCSR000DZK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2AphosphoS2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF153CXK/, /files/ENCFF042LWY/, /files/ENCFF540VUJ/, /files/ENCFF863XTX/, /files/ENCFF683ICJ/ 480524536 ENCODE Processing Pipeline 4014989ebc456951bf0c4aeb244c20ab https://www.encodeproject.org/files/ENCFF485QCZ/@@download/ENCFF485QCZ.bigWig released s3://encode-public/2021/01/08/264d005e-275a-47c9-9301-1f88d97c7649/ENCFF485QCZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/264d005e-275a-47c9-9301-1f88d97c7649/ENCFF485QCZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF643YBS bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2AphosphoS2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF278NPZ/, /files/ENCFF153CXK/, /files/ENCFF042LWY/, /files/ENCFF540VUJ/, /files/ENCFF863XTX/, /files/ENCFF683ICJ/, /files/ENCFF356LFX/ 267183 ENCODE Processing Pipeline 15fe39a900ad414bfc101f91fdba46de https://www.encodeproject.org/files/ENCFF643YBS/@@download/ENCFF643YBS.bed.gz released s3://encode-public/2021/01/08/f826aabe-f00a-48f8-a0b9-e5dcf18b6c70/ENCFF643YBS.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/f826aabe-f00a-48f8-a0b9-e5dcf18b6c70/ENCFF643YBS.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF899QYP bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2AphosphoS2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF643YBS/ 657766 ENCODE Processing Pipeline cd3ee788b2c9bdea529ed1387f20cec2 https://www.encodeproject.org/files/ENCFF899QYP/@@download/ENCFF899QYP.bigBed released s3://encode-public/2021/01/08/9a24e400-88a0-4303-883d-9b36f79cdddd/ENCFF899QYP.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/9a24e400-88a0-4303-883d-9b36f79cdddd/ENCFF899QYP.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking ENCFF902UDF bigWig bigWig signal p-value GRCh38 ENCSR000BGI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens USF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF458VXF/, /files/ENCFF768KPY/, /files/ENCFF002PKP/, /files/ENCFF551CSX/ 634009617 ENCODE Processing Pipeline 328d4d7b676b7ff9582a122912ac21cb https://www.encodeproject.org/files/ENCFF902UDF/@@download/ENCFF902UDF.bigWig released s3://encode-public/2020/12/26/ca44d1a7-a9f4-4278-933c-45cf34c61388/ENCFF902UDF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/ca44d1a7-a9f4-4278-933c-45cf34c61388/ENCFF902UDF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mixed read lengths, low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth extremely low read length ENCFF880HJL bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens USF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF879TPT/ 284786 ENCODE Processing Pipeline 20ff538b179527dc0a17d10a0645c58e https://www.encodeproject.org/files/ENCFF880HJL/@@download/ENCFF880HJL.bigBed released s3://encode-public/2020/12/26/12b6c84a-0198-4a44-ad0a-6161433baebf/ENCFF880HJL.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/12b6c84a-0198-4a44-ad0a-6161433baebf/ENCFF880HJL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mixed read lengths, low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth extremely low read length ENCFF879TPT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGI TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens USF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF458VXF/, /files/ENCFF356LFX/, /files/ENCFF768KPY/, /files/ENCFF551CSX/, /files/ENCFF002PKP/ 144751 ENCODE Processing Pipeline b0005b1e442bc9a38bc34ad1e7f053f2 https://www.encodeproject.org/files/ENCFF879TPT/@@download/ENCFF879TPT.bed.gz released s3://encode-public/2020/12/26/111b0c63-d313-43e9-af6a-64f3cd6d44e2/ENCFF879TPT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/111b0c63-d313-43e9-af6a-64f3cd6d44e2/ENCFF879TPT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mixed read lengths, low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth extremely low read length ENCFF706RWI bigWig bigWig signal p-value GRCh38 ENCSR597VGC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETV6-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF306HMU/, /files/ENCFF526WYZ/, /files/ENCFF530IRO/, /files/ENCFF783FZL/ 1670042931 ENCODE Processing Pipeline 9ae4ff8285d34908ad615034f25f072a https://www.encodeproject.org/files/ENCFF706RWI/@@download/ENCFF706RWI.bigWig released s3://encode-public/2020/12/03/533fd090-8092-4bcd-8b23-72194963a11e/ENCFF706RWI.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/533fd090-8092-4bcd-8b23-72194963a11e/ENCFF706RWI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF342QUN bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR597VGC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETV6-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF306HMU/, /files/ENCFF526WYZ/, /files/ENCFF530IRO/, /files/ENCFF783FZL/ 58116 ENCODE Processing Pipeline 2e6f32ebe8163bb5b7eeebc38f8df347 https://www.encodeproject.org/files/ENCFF342QUN/@@download/ENCFF342QUN.bed.gz released s3://encode-public/2020/12/03/543edd9b-693c-40b9-b538-67a596456d9e/ENCFF342QUN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/543edd9b-693c-40b9-b538-67a596456d9e/ENCFF342QUN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF348ABN bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR597VGC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETV6-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF342QUN/ 162541 ENCODE Processing Pipeline f01594476168ed6666893f99460ce6bb https://www.encodeproject.org/files/ENCFF348ABN/@@download/ENCFF348ABN.bigBed released s3://encode-public/2020/12/03/8dc010c4-a94f-4827-ad9c-c35f7c2637cc/ENCFF348ABN.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/8dc010c4-a94f-4827-ad9c-c35f7c2637cc/ENCFF348ABN.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF934JFA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POU2F2-human DNA 2011-07-18 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF702VIV/, /files/ENCFF219VPY/, /files/ENCFF519KIS/, /files/ENCFF882OBA/, /files/ENCFF011XTK/, /files/ENCFF075XYL/, /files/ENCFF356LFX/ 512492 ENCODE Processing Pipeline c89987c4e38ec5fe0887ccdb52463582 https://www.encodeproject.org/files/ENCFF934JFA/@@download/ENCFF934JFA.bed.gz released s3://encode-public/2020/12/27/d6ded945-fd19-4d27-a077-a678309dc05a/ENCFF934JFA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/d6ded945-fd19-4d27-a077-a678309dc05a/ENCFF934JFA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF803HIP bigWig bigWig signal p-value GRCh38 ENCSR000BGP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POU2F2-human DNA 2011-07-18 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF702VIV/, /files/ENCFF219VPY/, /files/ENCFF519KIS/, /files/ENCFF882OBA/, /files/ENCFF011XTK/, /files/ENCFF075XYL/ 1368970820 ENCODE Processing Pipeline 4c184f3af403a459a770994cdff737f0 https://www.encodeproject.org/files/ENCFF803HIP/@@download/ENCFF803HIP.bigWig released s3://encode-public/2020/12/27/5e153587-8403-4e12-aea3-5742eb1d3f0a/ENCFF803HIP.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/5e153587-8403-4e12-aea3-5742eb1d3f0a/ENCFF803HIP.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF207RKY bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POU2F2-human DNA 2011-07-18 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF934JFA/ 1042013 ENCODE Processing Pipeline e3c9ab545639d36a08a2973cd05e593a https://www.encodeproject.org/files/ENCFF207RKY/@@download/ENCFF207RKY.bigBed released s3://encode-public/2020/12/27/e47ee5f2-dedc-47ae-9a74-4b5917f04200/ENCFF207RKY.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/e47ee5f2-dedc-47ae-9a74-4b5917f04200/ENCFF207RKY.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF664CTK bigWig bigWig signal p-value GRCh38 ENCSR000DYQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ESRRA-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF521RQE/, /files/ENCFF770CJK/, /files/ENCFF196PQA/, /files/ENCFF591CFV/ 675646743 ENCODE Processing Pipeline 879ac00e1b121e047da38ace99bb5ee8 https://www.encodeproject.org/files/ENCFF664CTK/@@download/ENCFF664CTK.bigWig released s3://encode-public/2020/12/27/79e816a7-b58c-4b5a-927f-27bbc76e165d/ENCFF664CTK.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/79e816a7-b58c-4b5a-927f-27bbc76e165d/ENCFF664CTK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment ENCFF660PIB bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ESRRA-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF770CJK/, /files/ENCFF591CFV/, /files/ENCFF356LFX/, /files/ENCFF521RQE/, /files/ENCFF196PQA/ 82144 ENCODE Processing Pipeline a1516c61ad08367f01fa3d4aaebab853 https://www.encodeproject.org/files/ENCFF660PIB/@@download/ENCFF660PIB.bed.gz released s3://encode-public/2020/12/27/96f18d9a-635b-4ca0-97ba-6cc856958ced/ENCFF660PIB.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/96f18d9a-635b-4ca0-97ba-6cc856958ced/ENCFF660PIB.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment ENCFF760DZX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ESRRA-human DNA 2012-08-20 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF660PIB/ 213739 ENCODE Processing Pipeline 7d1f0157be804833e4429387d950f4b6 https://www.encodeproject.org/files/ENCFF760DZX/@@download/ENCFF760DZX.bigBed released s3://encode-public/2020/12/27/bec531c0-0933-4fee-ba5e-b06a35f901df/ENCFF760DZX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/bec531c0-0933-4fee-ba5e-b06a35f901df/ENCFF760DZX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, improper control_type of control experiment ENCFF101UQZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BMY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD21-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF940IMA/ 1352753 ENCODE Processing Pipeline 38417a64fcae096a7cc8c72b8928bd12 https://www.encodeproject.org/files/ENCFF101UQZ/@@download/ENCFF101UQZ.bigBed released s3://encode-public/2020/12/11/17d8c7eb-bf97-4736-a006-fb494441e9d5/ENCFF101UQZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/17d8c7eb-bf97-4736-a006-fb494441e9d5/ENCFF101UQZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth ENCFF407HJR bigWig bigWig signal p-value GRCh38 ENCSR000BMY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD21-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF873QGF/, /files/ENCFF638BXR/ 475175887 ENCODE Processing Pipeline fe58dd62cf5b79b396412b70d1e22a96 https://www.encodeproject.org/files/ENCFF407HJR/@@download/ENCFF407HJR.bigWig released s3://encode-public/2020/12/11/66a56f0d-f447-48eb-98d8-ba33b354d211/ENCFF407HJR.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/66a56f0d-f447-48eb-98d8-ba33b354d211/ENCFF407HJR.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth ENCFF940IMA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BMY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD21-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF873QGF/, /files/ENCFF638BXR/, /files/ENCFF356LFX/ 705418 ENCODE Processing Pipeline 05c03d927c1cc0646a8de45a8c8aad67 https://www.encodeproject.org/files/ENCFF940IMA/@@download/ENCFF940IMA.bed.gz released s3://encode-public/2020/12/11/fe15da26-6d96-4b63-b49f-09dabae1d02d/ENCFF940IMA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/fe15da26-6d96-4b63-b49f-09dabae1d02d/ENCFF940IMA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth ENCFF196JQW bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens USF2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF213IWO/, /files/ENCFF356LFX/, /files/ENCFF977QBD/, /files/ENCFF278NPZ/ 79057 ENCODE Processing Pipeline 9e23ce47bbd7cb879780a294a61071f8 https://www.encodeproject.org/files/ENCFF196JQW/@@download/ENCFF196JQW.bed.gz released s3://encode-public/2020/12/11/9b8f3309-3173-4358-a0f2-0d169af1027c/ENCFF196JQW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/9b8f3309-3173-4358-a0f2-0d169af1027c/ENCFF196JQW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance, low read depth ENCFF358NJW bigWig bigWig signal p-value GRCh38 ENCSR000DZU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens USF2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF977QBD/, /files/ENCFF863XTX/, /files/ENCFF213IWO/, /files/ENCFF278NPZ/ 328108000 ENCODE Processing Pipeline 539daa15081a501d3327eca4a493073e https://www.encodeproject.org/files/ENCFF358NJW/@@download/ENCFF358NJW.bigWig released s3://encode-public/2020/12/11/b4c097b6-4642-4996-af80-c5e0e1c5bed7/ENCFF358NJW.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/b4c097b6-4642-4996-af80-c5e0e1c5bed7/ENCFF358NJW.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance, low read depth ENCFF078SJX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens USF2-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF196JQW/ 185579 ENCODE Processing Pipeline 3bd548240d79382097b009eba6b859c1 https://www.encodeproject.org/files/ENCFF078SJX/@@download/ENCFF078SJX.bigBed released s3://encode-public/2020/12/11/cb9c8167-84cc-45fb-bb36-1a46e30af658/ENCFF078SJX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/cb9c8167-84cc-45fb-bb36-1a46e30af658/ENCFF078SJX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, borderline replicate concordance, low read depth ENCFF354VDX bigWig bigWig signal p-value GRCh38 ENCSR000EYZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOS-human DNA 2011-10-29 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF814AEX/, /files/ENCFF940GUI/, /files/ENCFF658PBP/, /files/ENCFF139BSO/ 219775398 ENCODE Processing Pipeline 4eab8b6f6d2645fcd7ec1b0f46af4451 https://www.encodeproject.org/files/ENCFF354VDX/@@download/ENCFF354VDX.bigWig released s3://encode-public/2020/12/27/51c8aea0-eeaf-4f70-8e63-422c8ff0828a/ENCFF354VDX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/51c8aea0-eeaf-4f70-8e63-422c8ff0828a/ENCFF354VDX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance insufficient read length extremely low read depth ENCFF571DGT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EYZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOS-human DNA 2011-10-29 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF814AEX/, /files/ENCFF139BSO/, /files/ENCFF356LFX/, /files/ENCFF940GUI/, /files/ENCFF658PBP/ 35808 ENCODE Processing Pipeline 7936abaa01edc683810b9a4de2d78900 https://www.encodeproject.org/files/ENCFF571DGT/@@download/ENCFF571DGT.bed.gz released s3://encode-public/2020/12/27/121d3fa0-096e-4ccb-b3be-82c4eae5378c/ENCFF571DGT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/121d3fa0-096e-4ccb-b3be-82c4eae5378c/ENCFF571DGT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance insufficient read length extremely low read depth ENCFF157FTE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EYZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOS-human DNA 2011-10-29 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF571DGT/ 106376 ENCODE Processing Pipeline b8e468bafecaf60e6be1feaffe347f63 https://www.encodeproject.org/files/ENCFF157FTE/@@download/ENCFF157FTE.bigBed released s3://encode-public/2020/12/27/6606df49-b3bf-45c5-9b02-081204df5ecc/ENCFF157FTE.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/6606df49-b3bf-45c5-9b02-081204df5ecc/ENCFF157FTE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance insufficient read length extremely low read depth ENCFF473ASZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BNG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2C-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF238UKB/ 427731 ENCODE Processing Pipeline d294d6f68e7d09ff460a55ed2fa6c982 https://www.encodeproject.org/files/ENCFF473ASZ/@@download/ENCFF473ASZ.bigBed released s3://encode-public/2020/12/26/1ad48f73-c888-4fb8-8d03-850caf150e9c/ENCFF473ASZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/1ad48f73-c888-4fb8-8d03-850caf150e9c/ENCFF473ASZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth, insufficient replicate concordance ENCFF462AFJ bigWig bigWig signal p-value GRCh38 ENCSR000BNG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2C-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF536BLL/, /files/ENCFF554UVL/, /files/ENCFF473DOY/ 398895763 ENCODE Processing Pipeline 53a69b62e429a9072bfba6d2211da261 https://www.encodeproject.org/files/ENCFF462AFJ/@@download/ENCFF462AFJ.bigWig released s3://encode-public/2020/12/26/5b2d4b4e-8bb5-4d94-a481-0b469c22fafe/ENCFF462AFJ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/5b2d4b4e-8bb5-4d94-a481-0b469c22fafe/ENCFF462AFJ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth, insufficient replicate concordance ENCFF238UKB bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BNG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2C-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF536BLL/, /files/ENCFF554UVL/, /files/ENCFF473DOY/, /files/ENCFF356LFX/ 207879 ENCODE Processing Pipeline c8e12391d8f61ffedf573f36bcaa0da9 https://www.encodeproject.org/files/ENCFF238UKB/@@download/ENCFF238UKB.bed.gz released s3://encode-public/2020/12/26/e19895ed-74d9-4462-912b-e1eb4a5408d5/ENCFF238UKB.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/e19895ed-74d9-4462-912b-e1eb4a5408d5/ENCFF238UKB.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient read depth, insufficient replicate concordance ENCFF914QGY bigWig bigWig signal p-value GRCh38 ENCSR000BHD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF501HUP/, /files/ENCFF075XYL/, /files/ENCFF519KIS/, /files/ENCFF882OBA/, /files/ENCFF565MKY/ 920689990 ENCODE Processing Pipeline 65700b7990b3d87ba79878a529e2bd65 https://www.encodeproject.org/files/ENCFF914QGY/@@download/ENCFF914QGY.bigWig released s3://encode-public/2020/12/27/9337641b-a5db-4bac-be35-093fdd8f0ab7/ENCFF914QGY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/9337641b-a5db-4bac-be35-093fdd8f0ab7/ENCFF914QGY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF827VVQ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF501HUP/, /files/ENCFF075XYL/, /files/ENCFF356LFX/, /files/ENCFF519KIS/, /files/ENCFF882OBA/, /files/ENCFF565MKY/ 384500 ENCODE Processing Pipeline 21a133c5e81d2ff4cacc8cc14f44fdd4 https://www.encodeproject.org/files/ENCFF827VVQ/@@download/ENCFF827VVQ.bed.gz released s3://encode-public/2020/12/27/f9b04bdf-f06d-4283-9b5a-1ce4346e55f3/ENCFF827VVQ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/f9b04bdf-f06d-4283-9b5a-1ce4346e55f3/ENCFF827VVQ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF482PUW bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PAX5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF827VVQ/ 718885 ENCODE Processing Pipeline a3878dc4ac9271fa9f074b1661712126 https://www.encodeproject.org/files/ENCFF482PUW/@@download/ENCFF482PUW.bigBed released s3://encode-public/2020/12/27/4d59438a-cf8d-43ef-8308-60abd013d8bd/ENCFF482PUW.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/4d59438a-cf8d-43ef-8308-60abd013d8bd/ENCFF482PUW.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF462GDD bigWig bigWig signal p-value GRCh38 ENCSR000BHB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF569VGS/, /files/ENCFF119SSU/, /files/ENCFF882OBA/ 964123143 ENCODE Processing Pipeline a7dc3e7cef33ce8bd01bf43ef4815afb https://www.encodeproject.org/files/ENCFF462GDD/@@download/ENCFF462GDD.bigWig released s3://encode-public/2020/12/27/9bef0d10-a380-4e1f-9d6a-22df5ced7c40/ENCFF462GDD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/27/9bef0d10-a380-4e1f-9d6a-22df5ced7c40/ENCFF462GDD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth insufficient read depth, insufficient replicate concordance ENCFF347NRI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF707DWY/ 178217 ENCODE Processing Pipeline 6e9882acf815249f74980dbe38dcf76a https://www.encodeproject.org/files/ENCFF347NRI/@@download/ENCFF347NRI.bigBed released s3://encode-public/2020/12/27/84f8a422-ccca-4ce6-8f89-3b47b50b8b4e/ENCFF347NRI.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/27/84f8a422-ccca-4ce6-8f89-3b47b50b8b4e/ENCFF347NRI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth insufficient read depth, insufficient replicate concordance ENCFF707DWY bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BHB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF356LFX/, /files/ENCFF075XYL/, /files/ENCFF569VGS/, /files/ENCFF119SSU/, /files/ENCFF882OBA/ 76682 ENCODE Processing Pipeline 9ceef50e6bbdf0d9113bdbb70a1aee43 https://www.encodeproject.org/files/ENCFF707DWY/@@download/ENCFF707DWY.bed.gz released s3://encode-public/2020/12/27/66c54b64-f3f1-40ac-931b-553cea52337c/ENCFF707DWY.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/27/66c54b64-f3f1-40ac-931b-553cea52337c/ENCFF707DWY.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth insufficient read depth, insufficient replicate concordance ENCFF474KWU bigWig bigWig signal p-value GRCh38 ENCSR000BJZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCLAF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF874YBK/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF554UVL/, /files/ENCFF408WPU/ 1152893098 ENCODE Processing Pipeline ca28312b33dd2231c651e33a360d17b2 https://www.encodeproject.org/files/ENCFF474KWU/@@download/ENCFF474KWU.bigWig released s3://encode-public/2021/01/06/0fd35234-1971-4185-a10d-f15d240af0f9/ENCFF474KWU.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/06/0fd35234-1971-4185-a10d-f15d240af0f9/ENCFF474KWU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length ENCFF306JRM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BJZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCLAF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF185BRL/ 782267 ENCODE Processing Pipeline ba54b648c0134e776ea5fe9b70249aef https://www.encodeproject.org/files/ENCFF306JRM/@@download/ENCFF306JRM.bigBed released s3://encode-public/2021/01/06/239772fa-a0ce-4e60-ae1b-fdac6f39d173/ENCFF306JRM.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/06/239772fa-a0ce-4e60-ae1b-fdac6f39d173/ENCFF306JRM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length ENCFF185BRL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BJZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCLAF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF874YBK/, /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF356LFX/, /files/ENCFF554UVL/, /files/ENCFF408WPU/ 373233 ENCODE Processing Pipeline 3367c349f280ca1026e912ef32afc53b https://www.encodeproject.org/files/ENCFF185BRL/@@download/ENCFF185BRL.bed.gz released s3://encode-public/2021/01/06/7c31bcd5-edcd-4ef8-b59b-151f84a24009/ENCFF185BRL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/06/7c31bcd5-edcd-4ef8-b59b-151f84a24009/ENCFF185BRL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length ENCFF291PLX bigWig bigWig signal p-value GRCh38 ENCSR459FTB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens UBTF-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF614DCJ/, /files/ENCFF833EYH/, /files/ENCFF402BOP/, /files/ENCFF500GXC/ 853088917 ENCODE Processing Pipeline dcb4fa874fbddadb0e5ef3c8b6d8c599 https://www.encodeproject.org/files/ENCFF291PLX/@@download/ENCFF291PLX.bigWig released s3://encode-public/2020/12/03/d155d019-bc61-4199-85c6-8c0db570f8f9/ENCFF291PLX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/d155d019-bc61-4199-85c6-8c0db570f8f9/ENCFF291PLX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF014PHS bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR459FTB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens UBTF-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF500GXC/, /files/ENCFF402BOP/, /files/ENCFF614DCJ/, /files/ENCFF833EYH/, /files/ENCFF356LFX/ 24392 ENCODE Processing Pipeline 6fea328d2275b56553e29cf02026c995 https://www.encodeproject.org/files/ENCFF014PHS/@@download/ENCFF014PHS.bed.gz released s3://encode-public/2020/12/03/6fde51b6-0d26-4a19-9abe-40862e609e16/ENCFF014PHS.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/6fde51b6-0d26-4a19-9abe-40862e609e16/ENCFF014PHS.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF323KDR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR459FTB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens UBTF-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF014PHS/ 82794 ENCODE Processing Pipeline ad61b4d7513011c4da5a1a1f4342121a https://www.encodeproject.org/files/ENCFF323KDR/@@download/ENCFF323KDR.bigBed released s3://encode-public/2020/12/03/f3e28fc5-4a01-4420-8c90-73ea94319fff/ENCFF323KDR.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/f3e28fc5-4a01-4420-8c90-73ea94319fff/ENCFF323KDR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF304QYE bigWig bigWig signal p-value GRCh38 ENCSR000DNP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SUPT20H-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF359GVP/, /files/ENCFF345ORP/ 516483359 ENCODE Processing Pipeline 59007a962d129fb4c0aaaf9ac8efb912 https://www.encodeproject.org/files/ENCFF304QYE/@@download/ENCFF304QYE.bigWig released s3://encode-public/2021/01/02/744407f1-622f-4ee9-82ca-56973a53d09f/ENCFF304QYE.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/02/744407f1-622f-4ee9-82ca-56973a53d09f/ENCFF304QYE.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking control insufficient read depth ENCFF684BIN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DNP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SUPT20H-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF356LFX/, /files/ENCFF359GVP/, /files/ENCFF345ORP/ 793 ENCODE Processing Pipeline 09fb08afc2c542a08b2225fc2cbd58d0 https://www.encodeproject.org/files/ENCFF684BIN/@@download/ENCFF684BIN.bed.gz released s3://encode-public/2021/01/02/b4e1ecb1-90e6-4557-ba0c-bad1b0f05c9c/ENCFF684BIN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/02/b4e1ecb1-90e6-4557-ba0c-bad1b0f05c9c/ENCFF684BIN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking control insufficient read depth ENCFF526ZEW bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DNP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SUPT20H-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF684BIN/ 29380 ENCODE Processing Pipeline 075bf7880345acbd88f3461c8517364b https://www.encodeproject.org/files/ENCFF526ZEW/@@download/ENCFF526ZEW.bigBed released s3://encode-public/2021/01/02/2caf3f7c-44e9-405c-ab73-fd3ad1c8ead2/ENCFF526ZEW.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/02/2caf3f7c-44e9-405c-ab73-fd3ad1c8ead2/ENCFF526ZEW.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking control insufficient read depth ENCFF149XND bigWig bigWig signal p-value GRCh38 ENCSR664POU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RELA-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF299TVN/, /files/ENCFF526WYZ/, /files/ENCFF277RXF/, /files/ENCFF783FZL/ 2139100967 ENCODE Processing Pipeline 54f87219a1b81c9fbcc639d4bd06e1df https://www.encodeproject.org/files/ENCFF149XND/@@download/ENCFF149XND.bigWig released s3://encode-public/2022/03/01/5d1cc92b-a5bf-4cc2-8704-9b6b1870afa9/ENCFF149XND.bigWig https://datasetencode.blob.core.windows.net/dataset/2022/03/01/5d1cc92b-a5bf-4cc2-8704-9b6b1870afa9/ENCFF149XND.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released borderline replicate concordance partially characterized antibody ENCFF141SMI bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR664POU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RELA-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF299TVN/, /files/ENCFF277RXF/, /files/ENCFF356LFX/, /files/ENCFF526WYZ/, /files/ENCFF783FZL/ 249121 ENCODE Processing Pipeline a3752493583589c7b849b49b379958cc https://www.encodeproject.org/files/ENCFF141SMI/@@download/ENCFF141SMI.bed.gz released s3://encode-public/2022/03/01/c878ffaf-6445-4910-bcb7-0e6177021636/ENCFF141SMI.bed.gz https://datasetencode.blob.core.windows.net/dataset/2022/03/01/c878ffaf-6445-4910-bcb7-0e6177021636/ENCFF141SMI.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released borderline replicate concordance partially characterized antibody ENCFF513IEN bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR664POU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RELA-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF141SMI/ 472029 ENCODE Processing Pipeline 8059dc08d400413b59cd171680bfb02e https://www.encodeproject.org/files/ENCFF513IEN/@@download/ENCFF513IEN.bigBed released s3://encode-public/2022/03/01/888583a0-e624-4f03-835e-5061eea2cb51/ENCFF513IEN.bigBed https://datasetencode.blob.core.windows.net/dataset/2022/03/01/888583a0-e624-4f03-835e-5061eea2cb51/ENCFF513IEN.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released borderline replicate concordance partially characterized antibody ENCFF474DNH bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DNM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFYB-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF156MUM/ 523073 ENCODE Processing Pipeline 6c322a3ed089ca630db33cc8d3dcfa65 https://www.encodeproject.org/files/ENCFF474DNH/@@download/ENCFF474DNH.bigBed released s3://encode-public/2021/01/02/65004ca5-914b-4950-b82a-bc07565d36f0/ENCFF474DNH.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/02/65004ca5-914b-4950-b82a-bc07565d36f0/ENCFF474DNH.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking insufficient read depth ENCFF225JEM bigWig bigWig signal p-value GRCh38 ENCSR000DNM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFYB-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF542URL/, /files/ENCFF863XTX/, /files/ENCFF278NPZ/, /files/ENCFF954HNR/ 262441823 ENCODE Processing Pipeline 5f2a8a478156d5536b6546d53c2da032 https://www.encodeproject.org/files/ENCFF225JEM/@@download/ENCFF225JEM.bigWig released s3://encode-public/2021/01/02/16eb2385-4ceb-42ab-956e-d69da4454fec/ENCFF225JEM.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/02/16eb2385-4ceb-42ab-956e-d69da4454fec/ENCFF225JEM.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking insufficient read depth ENCFF156MUM bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DNM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFYB-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF542URL/, /files/ENCFF863XTX/, /files/ENCFF278NPZ/, /files/ENCFF954HNR/, /files/ENCFF356LFX/ 255552 ENCODE Processing Pipeline 0bfad0a02dc87b500dbac1d0e4daa305 https://www.encodeproject.org/files/ENCFF156MUM/@@download/ENCFF156MUM.bed.gz released s3://encode-public/2021/01/02/99184283-7914-4c5d-8267-1c28c4ce1a33/ENCFF156MUM.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/02/99184283-7914-4c5d-8267-1c28c4ce1a33/ENCFF156MUM.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, improper control_type of control experiment, low read depth, mild to moderate bottlenecking insufficient read depth ENCFF492ZRZ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SPI1-human DNA 2011-07-18 ENCODE see document 2, 3 2_1, 3_1 /files/ENCFF882OBA/, /files/ENCFF436HQW/, /files/ENCFF075XYL/, /files/ENCFF519KIS/, /files/ENCFF086XFU/, /files/ENCFF356LFX/ 701921 ENCODE Processing Pipeline 288fa23cf3b0750de688c0e51dc71dc5 https://www.encodeproject.org/files/ENCFF492ZRZ/@@download/ENCFF492ZRZ.bed.gz released s3://encode-public/2021/01/02/5942b663-34f0-481a-a100-9df27982882d/ENCFF492ZRZ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/02/5942b663-34f0-481a-a100-9df27982882d/ENCFF492ZRZ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth ENCFF197ASC bigWig bigWig signal p-value GRCh38 ENCSR000BGQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SPI1-human DNA 2011-07-18 ENCODE see document 2, 3 2_1, 3_1 /files/ENCFF882OBA/, /files/ENCFF436HQW/, /files/ENCFF075XYL/, /files/ENCFF519KIS/, /files/ENCFF086XFU/ 954118453 ENCODE Processing Pipeline f32c375b682f048c2585942061b577a7 https://www.encodeproject.org/files/ENCFF197ASC/@@download/ENCFF197ASC.bigWig released s3://encode-public/2021/01/02/92a5ebaf-b8ec-427a-99d2-1699b4819821/ENCFF197ASC.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/02/92a5ebaf-b8ec-427a-99d2-1699b4819821/ENCFF197ASC.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth ENCFF134LCP bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SPI1-human DNA 2011-07-18 ENCODE see document 2, 3 2_1, 3_1 /files/ENCFF492ZRZ/ 1212335 ENCODE Processing Pipeline ea0d663aeae385089042eadd999d6021 https://www.encodeproject.org/files/ENCFF134LCP/@@download/ENCFF134LCP.bigBed released s3://encode-public/2021/01/02/fde12792-904f-49b8-907e-ebfe328388b8/ENCFF134LCP.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/02/fde12792-904f-49b8-907e-ebfe328388b8/ENCFF134LCP.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking insufficient read depth ENCFF818QFT bigWig bigWig signal p-value GRCh38 ENCSR000BRH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MTA3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF326TKN/, /files/ENCFF097QFS/, /files/ENCFF305BPN/, /files/ENCFF339NUH/, /files/ENCFF691UEA/ 1415719164 ENCODE Processing Pipeline e5fc227027cdbc5a16e1a5cf52ce0d06 https://www.encodeproject.org/files/ENCFF818QFT/@@download/ENCFF818QFT.bigWig released s3://encode-public/2020/12/28/2f68d561-a07b-4353-abdc-c12ed06d3a31/ENCFF818QFT.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/28/2f68d561-a07b-4353-abdc-c12ed06d3a31/ENCFF818QFT.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, borderline replicate concordance ENCFF475GKK bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MTA3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF326TKN/, /files/ENCFF691UEA/, /files/ENCFF097QFS/, /files/ENCFF305BPN/, /files/ENCFF339NUH/, /files/ENCFF356LFX/ 269976 ENCODE Processing Pipeline 31bc6965af1756dc68d0c085acf9d909 https://www.encodeproject.org/files/ENCFF475GKK/@@download/ENCFF475GKK.bed.gz released s3://encode-public/2020/12/28/ab2127ed-66bf-40ca-8f47-ad247919e56b/ENCFF475GKK.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/28/ab2127ed-66bf-40ca-8f47-ad247919e56b/ENCFF475GKK.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, borderline replicate concordance ENCFF681QPL bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BRH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MTA3-human DNA 2012-02-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF475GKK/ 647984 ENCODE Processing Pipeline b37b11ce12667de64565302b590f2e7e https://www.encodeproject.org/files/ENCFF681QPL/@@download/ENCFF681QPL.bigBed released s3://encode-public/2020/12/28/dd620091-7ac4-412a-926c-ca59f566c150/ENCFF681QPL.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/28/dd620091-7ac4-412a-926c-ca59f566c150/ENCFF681QPL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, borderline replicate concordance ENCFF002CPJ bed narrowPeak bed narrowPeak optimal IDR thresholded peaks hg19 ENCSR000EYU TF ChIP-seq EFO:0002784 GM12878 cell line Homo sapiens POLR3G-human DNA 2011-10-29 ENCODE see document 4779 ENCODE Consortium Analysis Working Group 712b70baad14c99c3a3b0acacf502ae7 https://www.encodeproject.org/files/ENCFF002CPJ/@@download/ENCFF002CPJ.bed.gz released s3://encode-public/2014/06/06/7197a669-5e4d-423c-a9d3-7a0d4e65e217/ENCFF002CPJ.narrowPeak.gz https://datasetencode.blob.core.windows.net/dataset/2014/06/06/7197a669-5e4d-423c-a9d3-7a0d4e65e217/ENCFF002CPJ.narrowPeak.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D Lab custom hg19 released insufficient read length ENCFF430FNU bigBed narrowPeak bigBed narrowPeak optimal IDR thresholded peaks hg19 ENCSR000EYU TF ChIP-seq EFO:0002784 GM12878 cell line Homo sapiens POLR3G-human DNA 2011-10-29 ENCODE see document /files/ENCFF002CPJ/ 86276 ENCODE Consortium 0a0051e97fb2c29a853eafdada853e03 https://www.encodeproject.org/files/ENCFF430FNU/@@download/ENCFF430FNU.bigBed released s3://encode-public/2015/06/02/20e8e5a4-e659-4088-9482-5127e003c91e/ENCFF430FNU.bigBed https://datasetencode.blob.core.windows.net/dataset/2015/06/02/20e8e5a4-e659-4088-9482-5127e003c91e/ENCFF430FNU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D Lab custom hg19 released insufficient read length ENCFF756RLY bigWig bigWig signal p-value GRCh38 ENCSR000BMB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF086JSB/, /files/ENCFF420ZXL/, /files/ENCFF554UVL/ 495760402 ENCODE Processing Pipeline c21690837f7847b4ba58350101a229f2 https://www.encodeproject.org/files/ENCFF756RLY/@@download/ENCFF756RLY.bigWig released s3://encode-public/2020/12/26/8c7941dc-e866-454b-a0a9-4400add7f08f/ENCFF756RLY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/8c7941dc-e866-454b-a0a9-4400add7f08f/ENCFF756RLY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF146SYU bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BMB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF086JSB/, /files/ENCFF420ZXL/, /files/ENCFF356LFX/ 502694 ENCODE Processing Pipeline ace1bc6770d0d7a6bc2b203a57072e6b https://www.encodeproject.org/files/ENCFF146SYU/@@download/ENCFF146SYU.bed.gz released s3://encode-public/2020/12/26/cfccbb6c-d91a-47c1-968a-3f7eba7067dc/ENCFF146SYU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/cfccbb6c-d91a-47c1-968a-3f7eba7067dc/ENCFF146SYU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF432UGA bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BMB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF146SYU/ 1018788 ENCODE Processing Pipeline dde43281ccce942bcc04e0d8ec15c221 https://www.encodeproject.org/files/ENCFF432UGA/@@download/ENCFF432UGA.bigBed released s3://encode-public/2020/12/26/5cf26ff5-fd3b-4224-b46c-109d5c8d4568/ENCFF432UGA.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/5cf26ff5-fd3b-4224-b46c-109d5c8d4568/ENCFF432UGA.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF519BGX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR637QAM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TRIM22-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF330FLG/, /files/ENCFF526WYZ/, /files/ENCFF505STX/, /files/ENCFF356LFX/, /files/ENCFF783FZL/ 309634 ENCODE Processing Pipeline 8e2876b846f859f13f9ef280155f9d0e https://www.encodeproject.org/files/ENCFF519BGX/@@download/ENCFF519BGX.bed.gz released s3://encode-public/2020/12/03/546044eb-18b7-4d4b-809a-b6aed06a5f55/ENCFF519BGX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/546044eb-18b7-4d4b-809a-b6aed06a5f55/ENCFF519BGX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF313QBQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR637QAM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TRIM22-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF519BGX/ 536834 ENCODE Processing Pipeline 375a5c3cfcc0dc0988537060fbb4e683 https://www.encodeproject.org/files/ENCFF313QBQ/@@download/ENCFF313QBQ.bigBed released s3://encode-public/2020/12/03/73d6aae8-e66d-4bcb-905b-b25e518520ad/ENCFF313QBQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/73d6aae8-e66d-4bcb-905b-b25e518520ad/ENCFF313QBQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF762EFB bigWig bigWig signal p-value GRCh38 ENCSR637QAM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TRIM22-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF783FZL/, /files/ENCFF505STX/, /files/ENCFF330FLG/ 1871176477 ENCODE Processing Pipeline a30f181832e4af7545d1be6085755576 https://www.encodeproject.org/files/ENCFF762EFB/@@download/ENCFF762EFB.bigWig released s3://encode-public/2020/12/03/05c6f507-6720-415c-ba8c-c3a57be8b1c4/ENCFF762EFB.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/05c6f507-6720-415c-ba8c-c3a57be8b1c4/ENCFF762EFB.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF093KLR bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR331HPA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens GABPA-human DNA 2014-06-30 ENCODE 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF339NUH/, /files/ENCFF025AON/, /files/ENCFF305BPN/, /files/ENCFF526CAL/, /files/ENCFF691UEA/ 257527 ENCODE Processing Pipeline 11412bed6e2135fce66a1de7da6f4241 https://www.encodeproject.org/files/ENCFF093KLR/@@download/ENCFF093KLR.bed.gz released s3://encode-public/2020/12/30/5fd3b09f-fe43-4a9f-b9c6-f753829e3809/ENCFF093KLR.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/30/5fd3b09f-fe43-4a9f-b9c6-f753829e3809/ENCFF093KLR.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, antibody characterized with exemption, low read depth ENCFF872TWR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR331HPA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens GABPA-human DNA 2014-06-30 ENCODE 1, 2 1_1, 2_1 /files/ENCFF093KLR/ 513846 ENCODE Processing Pipeline 440c1c1f8abd61d0ac3cf9ee744fbdfb https://www.encodeproject.org/files/ENCFF872TWR/@@download/ENCFF872TWR.bigBed released s3://encode-public/2020/12/30/d72eb522-3981-4f7e-9f35-8c5fffd7c23a/ENCFF872TWR.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/30/d72eb522-3981-4f7e-9f35-8c5fffd7c23a/ENCFF872TWR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, antibody characterized with exemption, low read depth ENCFF433TLK bigWig bigWig signal p-value GRCh38 ENCSR331HPA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens GABPA-human DNA 2014-06-30 ENCODE 1, 2 1_1, 2_1 /files/ENCFF339NUH/, /files/ENCFF025AON/, /files/ENCFF305BPN/, /files/ENCFF526CAL/, /files/ENCFF691UEA/ 1005049229 ENCODE Processing Pipeline 352a0a2b72db108e3169c6a146970d46 https://www.encodeproject.org/files/ENCFF433TLK/@@download/ENCFF433TLK.bigWig released s3://encode-public/2020/12/30/b213490a-30fc-4365-a9c0-ed2d71ea233b/ENCFF433TLK.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/30/b213490a-30fc-4365-a9c0-ed2d71ea233b/ENCFF433TLK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms, antibody characterized with exemption, low read depth ENCFF093WWL bigWig bigWig signal p-value GRCh38 ENCSR199WXF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EED-human DNA 2016-03-30 ENCODE sonication (generic) 1, 2 1_1, 2_1 /files/ENCFF213HNC/, /files/ENCFF167CAH/, /files/ENCFF654VKA/, /files/ENCFF449TAW/ 1380222139 ENCODE Processing Pipeline 26a1763cecd718360b5e522d58c3327e https://www.encodeproject.org/files/ENCFF093WWL/@@download/ENCFF093WWL.bigWig released s3://encode-public/2021/02/04/8c30fb59-4ce8-4485-9733-041101734ff9/ENCFF093WWL.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/8c30fb59-4ce8-4485-9733-041101734ff9/ENCFF093WWL.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF266FYW bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR199WXF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EED-human DNA 2016-03-30 ENCODE sonication (generic) 1, 2 1_1, 2_1 /files/ENCFF519PDZ/ 1208784 ENCODE Processing Pipeline 90e416ebcef579a53935a9e4eae837df https://www.encodeproject.org/files/ENCFF266FYW/@@download/ENCFF266FYW.bigBed released s3://encode-public/2021/02/04/e8afdb0b-d809-4de4-a3b2-157f128748ec/ENCFF266FYW.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/e8afdb0b-d809-4de4-a3b2-157f128748ec/ENCFF266FYW.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF519PDZ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR199WXF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EED-human DNA 2016-03-30 ENCODE sonication (generic) 1, 2 1_1, 2_1 /files/ENCFF449TAW/, /files/ENCFF167CAH/, /files/ENCFF213HNC/, /files/ENCFF654VKA/, /files/ENCFF356LFX/ 652333 ENCODE Processing Pipeline 8509a1c4448805f5e128c5a01282ea87 https://www.encodeproject.org/files/ENCFF519PDZ/@@download/ENCFF519PDZ.bed.gz released s3://encode-public/2021/02/04/a38f38c8-bdb0-4c45-bfd2-3b500bea2025/ENCFF519PDZ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/a38f38c8-bdb0-4c45-bfd2-3b500bea2025/ENCFF519PDZ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF359SOT bigWig bigWig signal p-value GRCh38 ENCSR408JQO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF3-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF125BMK/, /files/ENCFF783FZL/, /files/ENCFF698SFN/ 1834165312 ENCODE Processing Pipeline 71706fbc7f85fb8ea6bd5ede1e1327be https://www.encodeproject.org/files/ENCFF359SOT/@@download/ENCFF359SOT.bigWig released s3://encode-public/2020/12/04/4c8fea15-8c23-4a71-a02a-c64e8b309bc0/ENCFF359SOT.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/4c8fea15-8c23-4a71-a02a-c64e8b309bc0/ENCFF359SOT.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF887WLX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR408JQO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF3-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF125BMK/, /files/ENCFF356LFX/, /files/ENCFF698SFN/, /files/ENCFF526WYZ/, /files/ENCFF783FZL/ 70959 ENCODE Processing Pipeline fa5440dbb30c04ec93192388113cb135 https://www.encodeproject.org/files/ENCFF887WLX/@@download/ENCFF887WLX.bed.gz released s3://encode-public/2020/12/04/1d14142e-a5d3-421d-9d47-fb1624505511/ENCFF887WLX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/1d14142e-a5d3-421d-9d47-fb1624505511/ENCFF887WLX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF475ZIG bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR408JQO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF3-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF887WLX/ 170903 ENCODE Processing Pipeline 5a6d3fbd1c583da6b74a2bb489c0f8cf https://www.encodeproject.org/files/ENCFF475ZIG/@@download/ENCFF475ZIG.bigBed released s3://encode-public/2020/12/04/c07672a5-287c-4997-88d7-77c9801fb94e/ENCFF475ZIG.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/c07672a5-287c-4997-88d7-77c9801fb94e/ENCFF475ZIG.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF827OLT bigWig bigWig signal p-value GRCh38 ENCSR251OVJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMAD5-human DNA 2016-02-02 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF626RVO/, /files/ENCFF691XBY/, /files/ENCFF264GVN/, /files/ENCFF923QPK/ 1018731138 ENCODE Processing Pipeline df3ede8de3c6cf6d40196cf6f18865f3 https://www.encodeproject.org/files/ENCFF827OLT/@@download/ENCFF827OLT.bigWig released s3://encode-public/2021/02/04/050c77df-ac3a-4d7a-b3c8-45957e1f7f75/ENCFF827OLT.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/050c77df-ac3a-4d7a-b3c8-45957e1f7f75/ENCFF827OLT.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF485GWN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR251OVJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMAD5-human DNA 2016-02-02 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF691XBY/, /files/ENCFF356LFX/, /files/ENCFF264GVN/, /files/ENCFF923QPK/, /files/ENCFF626RVO/ 202501 ENCODE Processing Pipeline 93b676cc360d2842c6e850fc51f82ff3 https://www.encodeproject.org/files/ENCFF485GWN/@@download/ENCFF485GWN.bed.gz released s3://encode-public/2021/02/04/ccf5f76a-b88c-443a-bbad-c9856d5bb41c/ENCFF485GWN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/ccf5f76a-b88c-443a-bbad-c9856d5bb41c/ENCFF485GWN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF178LKN bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR251OVJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMAD5-human DNA 2016-02-02 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF485GWN/ 452055 ENCODE Processing Pipeline 856d22f81d0d9d3de150058b9df9dbe3 https://www.encodeproject.org/files/ENCFF178LKN/@@download/ENCFF178LKN.bigBed released s3://encode-public/2021/02/04/9d56e45a-5db4-4527-9683-d0fd9e40a74c/ENCFF178LKN.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/9d56e45a-5db4-4527-9683-d0fd9e40a74c/ENCFF178LKN.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF441LTE bigWig bigWig signal p-value GRCh38 ENCSR014YCR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF7-human DNA 2016-07-08 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF579YKO/, /files/ENCFF301KIW/, /files/ENCFF783FZL/, /files/ENCFF526WYZ/ 1721193361 ENCODE Processing Pipeline c3ee74fd9806a3a4550f577df8990c04 https://www.encodeproject.org/files/ENCFF441LTE/@@download/ENCFF441LTE.bigWig released s3://encode-public/2020/11/29/d3490b92-e2cc-4848-88de-a289ce6a2d3a/ENCFF441LTE.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/29/d3490b92-e2cc-4848-88de-a289ce6a2d3a/ENCFF441LTE.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, low read depth ENCFF277FJJ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR014YCR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF7-human DNA 2016-07-08 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF579YKO/, /files/ENCFF301KIW/, /files/ENCFF783FZL/, /files/ENCFF526WYZ/, /files/ENCFF356LFX/ 715080 ENCODE Processing Pipeline 55ca13a2e14b90838faac57fd3d3abb0 https://www.encodeproject.org/files/ENCFF277FJJ/@@download/ENCFF277FJJ.bed.gz released s3://encode-public/2020/11/29/ef473ea4-b91f-494a-92b2-3cbf468bad6e/ENCFF277FJJ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/29/ef473ea4-b91f-494a-92b2-3cbf468bad6e/ENCFF277FJJ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, low read depth ENCFF037PYH bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR014YCR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF7-human DNA 2016-07-08 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF277FJJ/ 1365627 ENCODE Processing Pipeline 5b4181869b0a272160e06ec6092097a2 https://www.encodeproject.org/files/ENCFF037PYH/@@download/ENCFF037PYH.bigBed released s3://encode-public/2020/11/29/0e0ba96c-65f4-4e6e-8249-efa1f6970bd4/ENCFF037PYH.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/29/0e0ba96c-65f4-4e6e-8249-efa1f6970bd4/ENCFF037PYH.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, low read depth ENCFF545BSZ bigWig bigWig signal p-value GRCh38 ENCSR482TWQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD51-human DNA 2016-11-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF431RHO/, /files/ENCFF526WYZ/, /files/ENCFF725MWO/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF783FZL/ 2803203359 ENCODE Processing Pipeline 7afcb2eb87962cd3608c3d294068f83a https://www.encodeproject.org/files/ENCFF545BSZ/@@download/ENCFF545BSZ.bigWig released s3://encode-public/2020/12/07/46f4c95a-dc6c-4530-8216-045b9eb587fe/ENCFF545BSZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/07/46f4c95a-dc6c-4530-8216-045b9eb587fe/ENCFF545BSZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms ENCFF916JXQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR482TWQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD51-human DNA 2016-11-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF345VPL/ 768827 ENCODE Processing Pipeline 02acd1559c7c2795eafdb4c63b3b5a61 https://www.encodeproject.org/files/ENCFF916JXQ/@@download/ENCFF916JXQ.bigBed released s3://encode-public/2020/12/07/411363f8-1c7e-41f5-ba4a-644c206847e4/ENCFF916JXQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/07/411363f8-1c7e-41f5-ba4a-644c206847e4/ENCFF916JXQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms ENCFF345VPL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR482TWQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RAD51-human DNA 2016-11-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF431RHO/, /files/ENCFF356LFX/, /files/ENCFF526WYZ/, /files/ENCFF725MWO/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF783FZL/ 325959 ENCODE Processing Pipeline 15a1f77800603e28dccb0b0fd815e2f7 https://www.encodeproject.org/files/ENCFF345VPL/@@download/ENCFF345VPL.bed.gz released s3://encode-public/2020/12/07/cf3e6168-64da-4f76-8e29-fa44ef644e24/ENCFF345VPL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/07/cf3e6168-64da-4f76-8e29-fa44ef644e24/ENCFF345VPL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms ENCFF239RAY bigWig bigWig signal p-value GRCh38 ENCSR330EXS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RBBP5-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF834ZDP/, /files/ENCFF251OOR/, /files/ENCFF556URJ/, /files/ENCFF994WVU/, /files/ENCFF597HRW/, /files/ENCFF748NUK/ 1827665174 ENCODE Processing Pipeline 1fb19483fc0e166e10ddd62e20c5b5f3 https://www.encodeproject.org/files/ENCFF239RAY/@@download/ENCFF239RAY.bigWig released s3://encode-public/2021/02/04/cfb6b3f6-666e-43fd-b188-975bf27ae7ed/ENCFF239RAY.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/cfb6b3f6-666e-43fd-b188-975bf27ae7ed/ENCFF239RAY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF474JTH bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR330EXS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RBBP5-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF834ZDP/, /files/ENCFF251OOR/, /files/ENCFF556URJ/, /files/ENCFF994WVU/, /files/ENCFF597HRW/, /files/ENCFF748NUK/ 33105 ENCODE Processing Pipeline 4bce8bd0a2d5152706ee02ff0c13a738 https://www.encodeproject.org/files/ENCFF474JTH/@@download/ENCFF474JTH.bed.gz released s3://encode-public/2021/02/04/2a9e3329-bc92-4cea-9d91-68786fc5da2b/ENCFF474JTH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/2a9e3329-bc92-4cea-9d91-68786fc5da2b/ENCFF474JTH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF020HTL bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR330EXS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RBBP5-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF474JTH/ 108532 ENCODE Processing Pipeline 86159bc153d0add0f854b9c6ab79f473 https://www.encodeproject.org/files/ENCFF020HTL/@@download/ENCFF020HTL.bigBed released s3://encode-public/2021/02/04/8fce6574-3222-4123-9ba1-b86f0d9e1d5d/ENCFF020HTL.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/8fce6574-3222-4123-9ba1-b86f0d9e1d5d/ENCFF020HTL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF277AUO bigWig bigWig signal p-value GRCh38 ENCSR117KWH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF207-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF634UNM/, /files/ENCFF526WYZ/, /files/ENCFF184HZS/, /files/ENCFF783FZL/ 2235294388 ENCODE Processing Pipeline f18d93df1ff63cf24920e37495a82caf https://www.encodeproject.org/files/ENCFF277AUO/@@download/ENCFF277AUO.bigWig released s3://encode-public/2020/11/28/b8035654-b3ce-42a8-a4c7-bb9b05e2d99c/ENCFF277AUO.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/28/b8035654-b3ce-42a8-a4c7-bb9b05e2d99c/ENCFF277AUO.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF153KBD bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR117KWH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF207-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF854NOE/ 380401 ENCODE Processing Pipeline f31528e40e02338a152deee0b33ae7bd https://www.encodeproject.org/files/ENCFF153KBD/@@download/ENCFF153KBD.bigBed released s3://encode-public/2020/11/28/798ed680-2524-4023-9af9-82b44034c6c8/ENCFF153KBD.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/28/798ed680-2524-4023-9af9-82b44034c6c8/ENCFF153KBD.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF854NOE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR117KWH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF207-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF634UNM/, /files/ENCFF526WYZ/, /files/ENCFF184HZS/, /files/ENCFF356LFX/ 200391 ENCODE Processing Pipeline 32505e6a67af2276e9f74c92acc18610 https://www.encodeproject.org/files/ENCFF854NOE/@@download/ENCFF854NOE.bed.gz released s3://encode-public/2020/11/28/67e318b8-80f4-45c6-ab96-8197dbbc53e1/ENCFF854NOE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/28/67e318b8-80f4-45c6-ab96-8197dbbc53e1/ENCFF854NOE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF002GST bigWig bigWig signal p-value GRCh38 ENCSR000DKT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF158NCR/, /files/ENCFF355JUH/, /files/ENCFF424XHE/ 337784636 ENCODE Processing Pipeline 054ad9efecc91b3466674280b308f5a3 https://www.encodeproject.org/files/ENCFF002GST/@@download/ENCFF002GST.bigWig released s3://encode-public/2021/01/06/5a09a51b-7495-4590-a079-a87661cd7748/ENCFF002GST.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/06/5a09a51b-7495-4590-a079-a87661cd7748/ENCFF002GST.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, low read depth, mixed read lengths, mild to moderate bottlenecking insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking, insufficient read length ENCFF712JXT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DKT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF158NCR/, /files/ENCFF355JUH/, /files/ENCFF424XHE/, /files/ENCFF356LFX/ 376469 ENCODE Processing Pipeline 5f8a759199df40166ca0b59c039d866c https://www.encodeproject.org/files/ENCFF712JXT/@@download/ENCFF712JXT.bed.gz released s3://encode-public/2021/01/06/f945e98c-ddad-425c-a56f-900056567b02/ENCFF712JXT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/06/f945e98c-ddad-425c-a56f-900056567b02/ENCFF712JXT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, low read depth, mixed read lengths, mild to moderate bottlenecking insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking, insufficient read length ENCFF631ERR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DKT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2011-03-17 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF712JXT/ 871681 ENCODE Processing Pipeline a5ff79bd0165efd550daf63fab0847d0 https://www.encodeproject.org/files/ENCFF631ERR/@@download/ENCFF631ERR.bigBed released s3://encode-public/2021/01/06/4211a512-8950-44ae-9b6b-cfa54fd7110f/ENCFF631ERR.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/06/4211a512-8950-44ae-9b6b-cfa54fd7110f/ENCFF631ERR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, low read depth, mixed read lengths, mild to moderate bottlenecking insufficient read depth, insufficient replicate concordance, poor library complexity, severe bottlenecking, insufficient read length ENCFF559MJP bigWig bigWig signal p-value GRCh38 ENCSR000DNN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFYA-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF797PCH/, /files/ENCFF278NPZ/, /files/ENCFF906LHW/, /files/ENCFF863XTX/ 330204158 ENCODE Processing Pipeline dc92a705d1264232cfaa087a634bd5bf https://www.encodeproject.org/files/ENCFF559MJP/@@download/ENCFF559MJP.bigWig released s3://encode-public/2020/12/12/f68305b2-0e20-471c-a404-8190be672926/ENCFF559MJP.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/12/f68305b2-0e20-471c-a404-8190be672926/ENCFF559MJP.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF937QTP bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DNN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFYA-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF797PCH/, /files/ENCFF356LFX/, /files/ENCFF278NPZ/, /files/ENCFF863XTX/, /files/ENCFF906LHW/ 17933 ENCODE Processing Pipeline 2da4bf1a32c700d20bf803320c9d2986 https://www.encodeproject.org/files/ENCFF937QTP/@@download/ENCFF937QTP.bed.gz released s3://encode-public/2020/12/12/6e52c1b8-56b0-49db-8435-66ad1756451c/ENCFF937QTP.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/12/6e52c1b8-56b0-49db-8435-66ad1756451c/ENCFF937QTP.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF718CBS bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DNN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFYA-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF937QTP/ 71698 ENCODE Processing Pipeline e26165e4a705f6540bdae535661bca76 https://www.encodeproject.org/files/ENCFF718CBS/@@download/ENCFF718CBS.bigBed released s3://encode-public/2020/12/12/a346095f-f6a9-4347-a258-277e53a03a62/ENCFF718CBS.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/12/a346095f-f6a9-4347-a258-277e53a03a62/ENCFF718CBS.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF063XXQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR330OEO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDAC2-human DNA 2017-08-12 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF581FMI/ 98783 ENCODE Processing Pipeline ae6ee7e1c1f46dd86173fbb8b2588f32 https://www.encodeproject.org/files/ENCFF063XXQ/@@download/ENCFF063XXQ.bigBed released s3://encode-public/2021/02/04/c1dfeed2-21e8-4ded-8860-de4f3f8f80b9/ENCFF063XXQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/c1dfeed2-21e8-4ded-8860-de4f3f8f80b9/ENCFF063XXQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF581FMI bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR330OEO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDAC2-human DNA 2017-08-12 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF994WVU/, /files/ENCFF434QLO/, /files/ENCFF121LBW/, /files/ENCFF748NUK/, /files/ENCFF834ZDP/, /files/ENCFF556URJ/, /files/ENCFF356LFX/ 27564 ENCODE Processing Pipeline 9266ad57124419f5d37a8169f2c9dd82 https://www.encodeproject.org/files/ENCFF581FMI/@@download/ENCFF581FMI.bed.gz released s3://encode-public/2021/02/04/8dd3cd1d-e660-41c9-b55c-51c78a4e4d2b/ENCFF581FMI.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/8dd3cd1d-e660-41c9-b55c-51c78a4e4d2b/ENCFF581FMI.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF561SYI bigWig bigWig signal p-value GRCh38 ENCSR330OEO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDAC2-human DNA 2017-08-12 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF994WVU/, /files/ENCFF434QLO/, /files/ENCFF121LBW/, /files/ENCFF748NUK/, /files/ENCFF834ZDP/, /files/ENCFF556URJ/ 1722385658 ENCODE Processing Pipeline 9ca263e5f45827ed0e4ad9c3cce27249 https://www.encodeproject.org/files/ENCFF561SYI/@@download/ENCFF561SYI.bigWig released s3://encode-public/2021/02/04/295ad728-bf99-4439-92a9-cae5d6b8c6b4/ENCFF561SYI.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/295ad728-bf99-4439-92a9-cae5d6b8c6b4/ENCFF561SYI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF089YRX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF945KYF/, /files/ENCFF098EHX/, /files/ENCFF356LFX/, /files/ENCFF002PKP/, /files/ENCFF768KPY/ 58874 ENCODE Processing Pipeline 884468134d07c65aee27cef511240b1b https://www.encodeproject.org/files/ENCFF089YRX/@@download/ENCFF089YRX.bed.gz released s3://encode-public/2020/12/26/7ccd4ac0-f454-440d-b317-57ad877b52ef/ENCFF089YRX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/7ccd4ac0-f454-440d-b317-57ad877b52ef/ENCFF089YRX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF880MVC bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF089YRX/ 166925 ENCODE Processing Pipeline d67cb9e838fe08ba15785a7bd37e51b6 https://www.encodeproject.org/files/ENCFF880MVC/@@download/ENCFF880MVC.bigBed released s3://encode-public/2020/12/26/4163b190-8504-4d6c-a916-ed9ec9795cd1/ENCFF880MVC.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/4163b190-8504-4d6c-a916-ed9ec9795cd1/ENCFF880MVC.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF472IQU bigWig bigWig signal p-value GRCh38 ENCSR000BGE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF002PKP/, /files/ENCFF945KYF/, /files/ENCFF098EHX/, /files/ENCFF768KPY/ 733529211 ENCODE Processing Pipeline c5faab152e8d857728acd372060ce324 https://www.encodeproject.org/files/ENCFF472IQU/@@download/ENCFF472IQU.bigWig released s3://encode-public/2020/12/26/3ed3fcbc-b554-44af-a450-cbbdb8956315/ENCFF472IQU.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/3ed3fcbc-b554-44af-a450-cbbdb8956315/ENCFF472IQU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF765PMV bigWig bigWig signal p-value GRCh38 ENCSR469WII TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BMI1-human DNA 2016-11-18 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF550DZG/, /files/ENCFF829BHI/, /files/ENCFF232AKP/ 2073506351 ENCODE Processing Pipeline eff768bd4cbeb7cc4cb1dfa4237da3b1 https://www.encodeproject.org/files/ENCFF765PMV/@@download/ENCFF765PMV.bigWig released s3://encode-public/2020/12/30/3b28f701-4db5-4dde-bd2a-8ab706c2d1ee/ENCFF765PMV.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/30/3b28f701-4db5-4dde-bd2a-8ab706c2d1ee/ENCFF765PMV.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF160PIE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR469WII TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BMI1-human DNA 2016-11-18 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF356LFX/, /files/ENCFF829BHI/, /files/ENCFF377KFK/, /files/ENCFF550DZG/ 238078 ENCODE Processing Pipeline 74eb4a87d172f7891490d9fddb1c9f74 https://www.encodeproject.org/files/ENCFF160PIE/@@download/ENCFF160PIE.bed.gz released s3://encode-public/2020/12/30/b9d407ac-d9bb-4b4f-8300-a52c7c308ef8/ENCFF160PIE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/30/b9d407ac-d9bb-4b4f-8300-a52c7c308ef8/ENCFF160PIE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF249AMT bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR469WII TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BMI1-human DNA 2016-11-18 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF160PIE/ 568958 ENCODE Processing Pipeline 4403a1cad52830a61b0e29d806e24b11 https://www.encodeproject.org/files/ENCFF249AMT/@@download/ENCFF249AMT.bigBed released s3://encode-public/2020/12/30/2b6c7272-55ce-4159-bbc6-546a80fb7bf8/ENCFF249AMT.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/30/2b6c7272-55ce-4159-bbc6-546a80fb7bf8/ENCFF249AMT.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF680XUD bigWig bigWig signal p-value GRCh38 ENCSR000DKV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-03-17 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF668ROZ/, /files/ENCFF158NCR/, /files/ENCFF500UFQ/, /files/ENCFF758YTP/ 345369209 ENCODE Processing Pipeline 01b5e63923f4a1d35889448422819162 https://www.encodeproject.org/files/ENCFF680XUD/@@download/ENCFF680XUD.bigWig released s3://encode-public/2020/09/26/739f27c9-58b5-4074-a698-e7323dfbdd8c/ENCFF680XUD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/09/26/739f27c9-58b5-4074-a698-e7323dfbdd8c/ENCFF680XUD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms, low read depth insufficient read depth, insufficient read length ENCFF827JRI bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DKV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-03-17 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF758YTP/, /files/ENCFF158NCR/, /files/ENCFF356LFX/, /files/ENCFF668ROZ/, /files/ENCFF500UFQ/ 829301 ENCODE Processing Pipeline a63064a7119b92f71eaef6bf7d3761fb https://www.encodeproject.org/files/ENCFF827JRI/@@download/ENCFF827JRI.bed.gz released s3://encode-public/2020/09/26/baaf8336-dbf0-401f-8216-abcdcfb13f7d/ENCFF827JRI.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/09/26/baaf8336-dbf0-401f-8216-abcdcfb13f7d/ENCFF827JRI.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms, low read depth insufficient read depth, insufficient read length ENCFF511URZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DKV TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-03-17 ENCODE see document 1, 2, 3 1_1, 2_1, 3_1 /files/ENCFF827JRI/ 1540507 ENCODE Processing Pipeline a483af747fd0e6d43e88ec683c7c616e https://www.encodeproject.org/files/ENCFF511URZ/@@download/ENCFF511URZ.bigBed released s3://encode-public/2020/09/26/109d964f-cb47-4cee-9dd3-d4b00bd051b8/ENCFF511URZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/09/26/109d964f-cb47-4cee-9dd3-d4b00bd051b8/ENCFF511URZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms, low read depth insufficient read depth, insufficient read length ENCFF716MIY bigWig bigWig signal p-value GRCh38 ENCSR000BGT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BATF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF859PRS/, /files/ENCFF755RCM/, /files/ENCFF882OBA/, /files/ENCFF075XYL/, /files/ENCFF519KIS/ 1054156606 ENCODE Processing Pipeline 78ccee418cca341d45761b51c390c04c https://www.encodeproject.org/files/ENCFF716MIY/@@download/ENCFF716MIY.bigWig released s3://encode-public/2020/12/28/d0056151-3102-4ed2-89b5-8c6a268bb290/ENCFF716MIY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/28/d0056151-3102-4ed2-89b5-8c6a268bb290/ENCFF716MIY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF728KFD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BATF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF859PRS/, /files/ENCFF755RCM/, /files/ENCFF356LFX/, /files/ENCFF882OBA/, /files/ENCFF075XYL/, /files/ENCFF519KIS/ 583115 ENCODE Processing Pipeline 7f22a3244fa244a435a39df67ec6a4f0 https://www.encodeproject.org/files/ENCFF728KFD/@@download/ENCFF728KFD.bed.gz released s3://encode-public/2020/12/28/67b52cf7-2366-43ec-b319-9eb58f7bea62/ENCFF728KFD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/28/67b52cf7-2366-43ec-b319-9eb58f7bea62/ENCFF728KFD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF954REE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BATF-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF728KFD/ 1057995 ENCODE Processing Pipeline bd764b8117dddc77341802653c6d6b9a https://www.encodeproject.org/files/ENCFF954REE/@@download/ENCFF954REE.bigBed released s3://encode-public/2020/12/28/c91962a1-57b9-4594-a987-4787583cd0e0/ENCFF954REE.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/28/c91962a1-57b9-4594-a987-4787583cd0e0/ENCFF954REE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF151UJT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR626VUC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETV6-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF729UXS/, /files/ENCFF974ACI/, /files/ENCFF356LFX/, /files/ENCFF028PUX/, /files/ENCFF923QPK/ 371509 ENCODE Processing Pipeline c17e4b2ecad7bfd5626f3711d549cb8d https://www.encodeproject.org/files/ENCFF151UJT/@@download/ENCFF151UJT.bed.gz released s3://encode-public/2021/02/04/6375cfba-89d6-43d2-b10b-5d76c69fdb05/ENCFF151UJT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/6375cfba-89d6-43d2-b10b-5d76c69fdb05/ENCFF151UJT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF105ZMI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR626VUC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETV6-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF151UJT/ 781266 ENCODE Processing Pipeline c3046b3a66b31c2297fe9f60b53338bb https://www.encodeproject.org/files/ENCFF105ZMI/@@download/ENCFF105ZMI.bigBed released s3://encode-public/2021/02/04/8f095ca7-c0d1-4b21-9982-f67be94dbfeb/ENCFF105ZMI.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/8f095ca7-c0d1-4b21-9982-f67be94dbfeb/ENCFF105ZMI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF203NIA bigWig bigWig signal p-value GRCh38 ENCSR626VUC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ETV6-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF923QPK/, /files/ENCFF729UXS/, /files/ENCFF974ACI/, /files/ENCFF028PUX/ 1138909750 ENCODE Processing Pipeline e0987ca3ea667a89fdbefe26a775dd51 https://www.encodeproject.org/files/ENCFF203NIA/@@download/ENCFF203NIA.bigWig released s3://encode-public/2021/02/04/7338edce-a29c-434f-a2ec-ffe4d5c3ae29/ENCFF203NIA.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/7338edce-a29c-434f-a2ec-ffe4d5c3ae29/ENCFF203NIA.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF295SGB bigWig bigWig signal p-value GRCh38 ENCSR514VAY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HCFC1-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF516MCF/, /files/ENCFF402BOP/, /files/ENCFF049MIZ/, /files/ENCFF500GXC/ 1057928677 ENCODE Processing Pipeline 231e274c040ea9b7fad2e742a20ff0ed https://www.encodeproject.org/files/ENCFF295SGB/@@download/ENCFF295SGB.bigWig released s3://encode-public/2020/12/01/04760546-2f94-4b60-9696-6eb558390090/ENCFF295SGB.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/04760546-2f94-4b60-9696-6eb558390090/ENCFF295SGB.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length ENCFF479QQB bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR514VAY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HCFC1-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF500GXC/, /files/ENCFF516MCF/, /files/ENCFF402BOP/, /files/ENCFF049MIZ/, /files/ENCFF356LFX/ 166233 ENCODE Processing Pipeline 0eb0e0c56d34cf9ba93564255336c61b https://www.encodeproject.org/files/ENCFF479QQB/@@download/ENCFF479QQB.bed.gz released s3://encode-public/2020/12/01/2beb3bae-7361-4ada-a6fb-d8c60b9456b3/ENCFF479QQB.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/2beb3bae-7361-4ada-a6fb-d8c60b9456b3/ENCFF479QQB.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length ENCFF372SXO bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR514VAY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HCFC1-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF479QQB/ 378898 ENCODE Processing Pipeline 347a829c1ac3b1c9dcda4a76465b0e09 https://www.encodeproject.org/files/ENCFF372SXO/@@download/ENCFF372SXO.bigBed released s3://encode-public/2020/12/01/6078eaf6-af69-4a82-bbe3-773eb535003b/ENCFF372SXO.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/6078eaf6-af69-4a82-bbe3-773eb535003b/ENCFF372SXO.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length ENCFF749DPM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR501DKS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF7-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF900GTF/ 383263 ENCODE Processing Pipeline 60fe4ad3b22920786aed7b946f9b524d https://www.encodeproject.org/files/ENCFF749DPM/@@download/ENCFF749DPM.bigBed released s3://encode-public/2021/02/04/34a1efba-f1a9-46d4-ba43-f7bafc21c737/ENCFF749DPM.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/34a1efba-f1a9-46d4-ba43-f7bafc21c737/ENCFF749DPM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF200BQY bigWig bigWig signal p-value GRCh38 ENCSR501DKS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF7-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF028PUX/, /files/ENCFF612NNB/, /files/ENCFF298VEV/, /files/ENCFF362PXX/ 864613697 ENCODE Processing Pipeline 489915d1870163ddf7443cc74d95e2b9 https://www.encodeproject.org/files/ENCFF200BQY/@@download/ENCFF200BQY.bigWig released s3://encode-public/2021/02/04/375fa270-f8af-412d-b786-8ea040de4640/ENCFF200BQY.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/375fa270-f8af-412d-b786-8ea040de4640/ENCFF200BQY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF900GTF bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR501DKS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF7-human DNA 2014-07-07 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF612NNB/, /files/ENCFF362PXX/, /files/ENCFF298VEV/, /files/ENCFF028PUX/ 180118 ENCODE Processing Pipeline 5f5528baf6b3cc6da91d6ff83bed81d5 https://www.encodeproject.org/files/ENCFF900GTF/@@download/ENCFF900GTF.bed.gz released s3://encode-public/2021/02/04/29de87ec-21dc-449b-9d1b-dfcce7cd7e80/ENCFF900GTF.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/29de87ec-21dc-449b-9d1b-dfcce7cd7e80/ENCFF900GTF.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, antibody characterized with exemption ENCFF710TOZ bigWig bigWig signal p-value GRCh38 ENCSR372GIN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBX5-human DNA 2016-10-27 ENCODE sonication (generic) 1, 2 1_1, 2_1 /files/ENCFF247VXP/, /files/ENCFF178HOE/, /files/ENCFF305BPN/, /files/ENCFF339NUH/, /files/ENCFF691UEA/ 1081201679 ENCODE Processing Pipeline 4d0f1620c77188da2d91e8aa846d7802 https://www.encodeproject.org/files/ENCFF710TOZ/@@download/ENCFF710TOZ.bigWig released s3://encode-public/2020/12/04/75a01511-b37c-4a78-b316-159191478d65/ENCFF710TOZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/75a01511-b37c-4a78-b316-159191478d65/ENCFF710TOZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms, low read depth ENCFF864AYJ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR372GIN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBX5-human DNA 2016-10-27 ENCODE sonication (generic) 1, 2 1_1, 2_1 /files/ENCFF247VXP/, /files/ENCFF178HOE/, /files/ENCFF305BPN/, /files/ENCFF356LFX/, /files/ENCFF339NUH/, /files/ENCFF691UEA/ 285377 ENCODE Processing Pipeline fcec4f86d5253813f2427b8ec99e2a95 https://www.encodeproject.org/files/ENCFF864AYJ/@@download/ENCFF864AYJ.bed.gz released s3://encode-public/2020/12/04/a2bc6d73-61bb-4cc4-978c-143404d2b780/ENCFF864AYJ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/a2bc6d73-61bb-4cc4-978c-143404d2b780/ENCFF864AYJ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms, low read depth ENCFF542UDC bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR372GIN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBX5-human DNA 2016-10-27 ENCODE sonication (generic) 1, 2 1_1, 2_1 /files/ENCFF864AYJ/ 621036 ENCODE Processing Pipeline 9b1f2fb9ee446f4cb5d75a8db0f76dae https://www.encodeproject.org/files/ENCFF542UDC/@@download/ENCFF542UDC.bigBed released s3://encode-public/2020/12/04/9b89edd2-b0f1-413b-b1b0-eed568ce98ba/ENCFF542UDC.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/9b89edd2-b0f1-413b-b1b0-eed568ce98ba/ENCFF542UDC.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms, low read depth ENCFF708UJN bigWig bigWig signal p-value GRCh38 ENCSR819ATC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MYB-human DNA 2014-07-07 ENCODE 150-350 1, 3 1_1, 3_1 /files/ENCFF648JIW/, /files/ENCFF500GXC/, /files/ENCFF402BOP/, /files/ENCFF969KVU/ 862792104 ENCODE Processing Pipeline 7d226f240a4aa3f583f80f25442b82d3 https://www.encodeproject.org/files/ENCFF708UJN/@@download/ENCFF708UJN.bigWig released s3://encode-public/2020/11/30/cea5e961-c5ce-44c4-ba76-57c650973c9b/ENCFF708UJN.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/30/cea5e961-c5ce-44c4-ba76-57c650973c9b/ENCFF708UJN.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF904SON bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR819ATC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MYB-human DNA 2014-07-07 ENCODE 150-350 1, 3 1_1, 3_1 /files/ENCFF705CGM/ 163185 ENCODE Processing Pipeline 281cf4b9a7baede12abb05f2c6ee316f https://www.encodeproject.org/files/ENCFF904SON/@@download/ENCFF904SON.bigBed released s3://encode-public/2020/11/30/e03614d7-59a7-4fdc-ac5d-dbc849289930/ENCFF904SON.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/30/e03614d7-59a7-4fdc-ac5d-dbc849289930/ENCFF904SON.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF705CGM bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR819ATC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MYB-human DNA 2014-07-07 ENCODE 150-350 1, 3 1_1, 3_1 /files/ENCFF402BOP/, /files/ENCFF356LFX/, /files/ENCFF648JIW/, /files/ENCFF969KVU/, /files/ENCFF500GXC/ 68416 ENCODE Processing Pipeline 1b16672375637a21b3e84f1476e184e6 https://www.encodeproject.org/files/ENCFF705CGM/@@download/ENCFF705CGM.bed.gz released s3://encode-public/2020/11/30/9b6322a6-2e40-49fc-8700-3f415d8be7b8/ENCFF705CGM.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/30/9b6322a6-2e40-49fc-8700-3f415d8be7b8/ENCFF705CGM.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, borderline replicate concordance, low read depth ENCFF627JOG bigWig bigWig signal p-value GRCh38 ENCSR009MBP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HSF1-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF860SXP/, /files/ENCFF500GXC/, /files/ENCFF266YJY/, /files/ENCFF402BOP/ 986738917 ENCODE Processing Pipeline d2525ca55a3b13907bb1f94fb06c2e3e https://www.encodeproject.org/files/ENCFF627JOG/@@download/ENCFF627JOG.bigWig released s3://encode-public/2020/12/01/18269e0b-0b74-4871-8bb8-d1dbfd068a77/ENCFF627JOG.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/18269e0b-0b74-4871-8bb8-d1dbfd068a77/ENCFF627JOG.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF663ODL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR009MBP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HSF1-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF500GXC/, /files/ENCFF860SXP/, /files/ENCFF266YJY/, /files/ENCFF402BOP/ 49689 ENCODE Processing Pipeline fe61248bc4625ca88a38fe0ff88b3902 https://www.encodeproject.org/files/ENCFF663ODL/@@download/ENCFF663ODL.bed.gz released s3://encode-public/2020/12/01/cde6c0b2-3fe6-4b1a-8a98-575763273353/ENCFF663ODL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/cde6c0b2-3fe6-4b1a-8a98-575763273353/ENCFF663ODL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF845UGP bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR009MBP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HSF1-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF663ODL/ 136804 ENCODE Processing Pipeline f278201e61000c52e1d7834febf39b1d https://www.encodeproject.org/files/ENCFF845UGP/@@download/ENCFF845UGP.bigBed released s3://encode-public/2020/12/01/2219174f-1df3-4c85-a64e-d7cab0126a7a/ENCFF845UGP.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/2219174f-1df3-4c85-a64e-d7cab0126a7a/ENCFF845UGP.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF337MYH bigWig bigWig signal p-value GRCh38 ENCSR000DYY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E2F4-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF182QPN/, /files/ENCFF278NPZ/, /files/ENCFF683ICJ/, /files/ENCFF863XTX/, /files/ENCFF053HZD/, /files/ENCFF042LWY/ 618051395 ENCODE Processing Pipeline 2f059b46ee552db77fb2583baa55d938 https://www.encodeproject.org/files/ENCFF337MYH/@@download/ENCFF337MYH.bigWig released s3://encode-public/2021/01/08/7923502f-571e-4ce6-bb4d-3094a8160fd0/ENCFF337MYH.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/7923502f-571e-4ce6-bb4d-3094a8160fd0/ENCFF337MYH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF509WLQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E2F4-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF744QAC/ 189891 ENCODE Processing Pipeline bef13cec695736df197b5e6a6cf2959c https://www.encodeproject.org/files/ENCFF509WLQ/@@download/ENCFF509WLQ.bigBed released s3://encode-public/2021/01/08/00e0fef5-13d4-4763-889f-ad499e4b7ae0/ENCFF509WLQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/00e0fef5-13d4-4763-889f-ad499e4b7ae0/ENCFF509WLQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF744QAC bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DYY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E2F4-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF182QPN/, /files/ENCFF278NPZ/, /files/ENCFF683ICJ/, /files/ENCFF356LFX/, /files/ENCFF863XTX/, /files/ENCFF053HZD/, /files/ENCFF042LWY/ 82772 ENCODE Processing Pipeline 118bb00dbbce25b22bdb4881167bce4d https://www.encodeproject.org/files/ENCFF744QAC/@@download/ENCFF744QAC.bed.gz released s3://encode-public/2021/01/08/30e580d8-8ffb-449d-8249-daf783ae09a6/ENCFF744QAC.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/30e580d8-8ffb-449d-8249-daf783ae09a6/ENCFF744QAC.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF474KMR bigWig bigWig signal p-value GRCh38 ENCSR000EUK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF274-human DNA 2011-10-29 ENCODE see document 1 1_1 /files/ENCFF658PBP/, /files/ENCFF833GZY/ 169523427 ENCODE Processing Pipeline d707682f9eeca1ef9f42192c941cc617 https://www.encodeproject.org/files/ENCFF474KMR/@@download/ENCFF474KMR.bigWig released s3://encode-public/2021/07/29/2248c5e0-5c50-42aa-9445-e5ba15232c5d/ENCFF474KMR.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/07/29/2248c5e0-5c50-42aa-9445-e5ba15232c5d/ENCFF474KMR.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released insufficient read depth, insufficient read length ENCFF034UEJ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EUK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF274-human DNA 2011-10-29 ENCODE see document 1 1_1 /files/ENCFF356LFX/, /files/ENCFF658PBP/, /files/ENCFF833GZY/ 7479 ENCODE Processing Pipeline 7084a71fc840244535437a1806f21f6a https://www.encodeproject.org/files/ENCFF034UEJ/@@download/ENCFF034UEJ.bed.gz released s3://encode-public/2021/07/29/9917f9f8-ef9c-4487-baec-d3a8a276717d/ENCFF034UEJ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/07/29/9917f9f8-ef9c-4487-baec-d3a8a276717d/ENCFF034UEJ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released insufficient read depth, insufficient read length ENCFF728JYE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000EUK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF274-human DNA 2011-10-29 ENCODE see document 1 1_1 /files/ENCFF034UEJ/ 96242 ENCODE Processing Pipeline 826357612d9ef7a8ab690fb53d98ff8d https://www.encodeproject.org/files/ENCFF728JYE/@@download/ENCFF728JYE.bigBed released s3://encode-public/2021/07/29/4b2c3e08-7e36-4974-a827-f0260e147340/ENCFF728JYE.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/07/29/4b2c3e08-7e36-4974-a827-f0260e147340/ENCFF728JYE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released insufficient read depth, insufficient read length ENCFF810XRY bigWig bigWig signal p-value GRCh38 ENCSR000BGU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EBF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF650TOW/, /files/ENCFF519KIS/, /files/ENCFF679DWX/ 974116422 ENCODE Processing Pipeline 9857ef82acf93016ecad36bff95c43ee https://www.encodeproject.org/files/ENCFF810XRY/@@download/ENCFF810XRY.bigWig released s3://encode-public/2020/12/12/6314d155-6e8b-4279-a6c0-8d7f73114394/ENCFF810XRY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/12/6314d155-6e8b-4279-a6c0-8d7f73114394/ENCFF810XRY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF895MHN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EBF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF650TOW/, /files/ENCFF519KIS/, /files/ENCFF679DWX/, /files/ENCFF356LFX/ 744477 ENCODE Processing Pipeline 62c5cdd498d2027d029b847f0ab2241a https://www.encodeproject.org/files/ENCFF895MHN/@@download/ENCFF895MHN.bed.gz released s3://encode-public/2020/12/12/4cbad5c1-c53a-4484-aeb7-75ae90addb79/ENCFF895MHN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/12/4cbad5c1-c53a-4484-aeb7-75ae90addb79/ENCFF895MHN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF813OXE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EBF1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF895MHN/ 1504250 ENCODE Processing Pipeline 77c5e93a5c79e3078631e697e67d0966 https://www.encodeproject.org/files/ENCFF813OXE/@@download/ENCFF813OXE.bigBed released s3://encode-public/2020/12/12/32521618-cb57-4ca1-bea5-04aed89d6856/ENCFF813OXE.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/12/32521618-cb57-4ca1-bea5-04aed89d6856/ENCFF813OXE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF385JTY bigWig bigWig signal p-value GRCh38 ENCSR000DZB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELK1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF863XTX/, /files/ENCFF042LWY/, /files/ENCFF536CQB/, /files/ENCFF553HGU/, /files/ENCFF278NPZ/ 709511701 ENCODE Processing Pipeline 0f7d80d762b8515ba0c21f25b93dda36 https://www.encodeproject.org/files/ENCFF385JTY/@@download/ENCFF385JTY.bigWig released s3://encode-public/2021/01/08/ff64a6a0-4cb9-469b-a383-dc32037d7c55/ENCFF385JTY.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/01/08/ff64a6a0-4cb9-469b-a383-dc32037d7c55/ENCFF385JTY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF164MPE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELK1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF683ICJ/, /files/ENCFF356LFX/, /files/ENCFF863XTX/, /files/ENCFF042LWY/, /files/ENCFF536CQB/, /files/ENCFF553HGU/, /files/ENCFF278NPZ/ 134754 ENCODE Processing Pipeline 47257cc399b9e2aadc6f385b6dcd6caa https://www.encodeproject.org/files/ENCFF164MPE/@@download/ENCFF164MPE.bed.gz released s3://encode-public/2021/01/08/cb478cb0-89d8-41de-8edd-08bd216c6d66/ENCFF164MPE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/01/08/cb478cb0-89d8-41de-8edd-08bd216c6d66/ENCFF164MPE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF807NFQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELK1-human DNA 2012-05-14 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF164MPE/ 300359 ENCODE Processing Pipeline 535196b295a47eb25cbdcb0d712299b1 https://www.encodeproject.org/files/ENCFF807NFQ/@@download/ENCFF807NFQ.bigBed released s3://encode-public/2021/01/08/6aa5b039-46f8-4c3b-9979-5fefdd76ba39/ENCFF807NFQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/01/08/6aa5b039-46f8-4c3b-9979-5fefdd76ba39/ENCFF807NFQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, improper control_type of control experiment, low read depth ENCFF660MMF bigWig bigWig signal p-value GRCh38 ENCSR681NOM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPB-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF402BOP/, /files/ENCFF869GAT/, /files/ENCFF168ITH/, /files/ENCFF500GXC/ 950367147 ENCODE Processing Pipeline 760138cf3b618dc5a07ea9cd5cc8bc87 https://www.encodeproject.org/files/ENCFF660MMF/@@download/ENCFF660MMF.bigWig released s3://encode-public/2020/11/30/02ba0045-a4ba-45af-9614-45c4828b1c80/ENCFF660MMF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/30/02ba0045-a4ba-45af-9614-45c4828b1c80/ENCFF660MMF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF864EON bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR681NOM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPB-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF869GAT/, /files/ENCFF168ITH/, /files/ENCFF500GXC/, /files/ENCFF402BOP/, /files/ENCFF356LFX/ 42985 ENCODE Processing Pipeline 0ad92c484e0e42d145b1290895d8edde https://www.encodeproject.org/files/ENCFF864EON/@@download/ENCFF864EON.bed.gz released s3://encode-public/2020/11/30/47d70e51-dc5b-4163-a7e9-2d5194ba3c36/ENCFF864EON.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/30/47d70e51-dc5b-4163-a7e9-2d5194ba3c36/ENCFF864EON.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF088LCU bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR681NOM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPB-human DNA 2014-07-07 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF864EON/ 109786 ENCODE Processing Pipeline 04e8d5e22b46e4f9fa5ce7cfad819e2d https://www.encodeproject.org/files/ENCFF088LCU/@@download/ENCFF088LCU.bigBed released s3://encode-public/2020/11/30/1153af7c-f8a1-4f1d-a57a-b36622f1a8da/ENCFF088LCU.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/30/1153af7c-f8a1-4f1d-a57a-b36622f1a8da/ENCFF088LCU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF530IKD bigWig bigWig signal p-value GRCh38 ENCSR900XDB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZFP36-human DNA 2014-07-07 ENCODE 150-350 4, 5 4_1, 5_1 /files/ENCFF140KJO/, /files/ENCFF809HYS/, /files/ENCFF402BOP/, /files/ENCFF500GXC/ 1046562477 ENCODE Processing Pipeline 1bf412d03a5654c7f828e7c5bb1b4c03 https://www.encodeproject.org/files/ENCFF530IKD/@@download/ENCFF530IKD.bigWig released s3://encode-public/2020/12/02/da366aaf-c7a5-4b5c-85cd-ce623ffafd0d/ENCFF530IKD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/da366aaf-c7a5-4b5c-85cd-ce623ffafd0d/ENCFF530IKD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking partially characterized antibody ENCFF234WRG bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR900XDB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZFP36-human DNA 2014-07-07 ENCODE 150-350 4, 5 4_1, 5_1 /files/ENCFF627JQX/ 405652 ENCODE Processing Pipeline 9c59755ee22103321b792c96d61b86f3 https://www.encodeproject.org/files/ENCFF234WRG/@@download/ENCFF234WRG.bigBed released s3://encode-public/2020/12/02/ea8c7289-1f9d-463f-86dd-231f60ee3647/ENCFF234WRG.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/ea8c7289-1f9d-463f-86dd-231f60ee3647/ENCFF234WRG.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking partially characterized antibody ENCFF627JQX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR900XDB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZFP36-human DNA 2014-07-07 ENCODE 150-350 4, 5 4_1, 5_1 /files/ENCFF809HYS/, /files/ENCFF140KJO/, /files/ENCFF402BOP/, /files/ENCFF356LFX/, /files/ENCFF500GXC/ 191611 ENCODE Processing Pipeline 8165c2b5217ec3b1f139b690912c4877 https://www.encodeproject.org/files/ENCFF627JQX/@@download/ENCFF627JQX.bed.gz released s3://encode-public/2020/12/02/630effaf-ff8c-4131-b791-8f33720d6314/ENCFF627JQX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/630effaf-ff8c-4131-b791-8f33720d6314/ENCFF627JQX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking partially characterized antibody ENCFF153YIM bigWig bigWig signal p-value GRCh38 ENCSR347NOB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPZ-human DNA 2016-03-02 ENCODE 150-350 1, 3 1_1, 3_1 /files/ENCFF500GXC/, /files/ENCFF775BYP/, /files/ENCFF746XZL/, /files/ENCFF402BOP/ 948060721 ENCODE Processing Pipeline 36dd6f30caacac192acd15025b73208a https://www.encodeproject.org/files/ENCFF153YIM/@@download/ENCFF153YIM.bigWig released s3://encode-public/2020/12/04/bf113f56-0953-4568-b436-0bf553c8f42d/ENCFF153YIM.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/bf113f56-0953-4568-b436-0bf553c8f42d/ENCFF153YIM.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF932XBQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR347NOB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPZ-human DNA 2016-03-02 ENCODE 150-350 1, 3 1_1, 3_1 /files/ENCFF639KLW/ 99111 ENCODE Processing Pipeline 8916c05d01c62e8186d6c587e6526c31 https://www.encodeproject.org/files/ENCFF932XBQ/@@download/ENCFF932XBQ.bigBed released s3://encode-public/2020/12/04/3a9eed9b-be5d-4417-abbd-8ef1bfbe2ebe/ENCFF932XBQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/3a9eed9b-be5d-4417-abbd-8ef1bfbe2ebe/ENCFF932XBQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF639KLW bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR347NOB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CEBPZ-human DNA 2016-03-02 ENCODE 150-350 1, 3 1_1, 3_1 /files/ENCFF500GXC/, /files/ENCFF356LFX/, /files/ENCFF402BOP/, /files/ENCFF746XZL/, /files/ENCFF775BYP/ 24856 ENCODE Processing Pipeline 4b94ae9e97ddcf319219d074c3e81ec0 https://www.encodeproject.org/files/ENCFF639KLW/@@download/ENCFF639KLW.bed.gz released s3://encode-public/2020/12/04/a9e9596f-3835-4dcc-9c70-74efea41c3af/ENCFF639KLW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/a9e9596f-3835-4dcc-9c70-74efea41c3af/ENCFF639KLW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, low read depth ENCFF023CDP bigWig bigWig signal p-value GRCh38 ENCSR860UHK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBFB-human DNA 2016-06-13 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF116KZS/, /files/ENCFF612URF/, /files/ENCFF792KPG/, /files/ENCFF213HNC/ 976295780 ENCODE Processing Pipeline 7c7c84062b3b24582d1bf66ccb058b0b https://www.encodeproject.org/files/ENCFF023CDP/@@download/ENCFF023CDP.bigWig released s3://encode-public/2021/02/04/df8ada00-8407-4326-899a-5c2a0142ed59/ENCFF023CDP.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/df8ada00-8407-4326-899a-5c2a0142ed59/ENCFF023CDP.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF876CUT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR860UHK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBFB-human DNA 2016-06-13 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF116KZS/, /files/ENCFF612URF/, /files/ENCFF213HNC/, /files/ENCFF792KPG/, /files/ENCFF356LFX/ 365685 ENCODE Processing Pipeline 9b3ac04062facf95319ef5ac6fc87ae2 https://www.encodeproject.org/files/ENCFF876CUT/@@download/ENCFF876CUT.bed.gz released s3://encode-public/2021/02/04/29d60e4a-0c0d-4b38-a57d-27b8c86d3a17/ENCFF876CUT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/29d60e4a-0c0d-4b38-a57d-27b8c86d3a17/ENCFF876CUT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF056JUS bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR860UHK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBFB-human DNA 2016-06-13 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF876CUT/ 759186 ENCODE Processing Pipeline d242002a6565b27fec01b9531c6679ac https://www.encodeproject.org/files/ENCFF056JUS/@@download/ENCFF056JUS.bigBed released s3://encode-public/2021/02/04/5f77f12c-38ea-4bb0-9413-8c93b91ca3e1/ENCFF056JUS.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/5f77f12c-38ea-4bb0-9413-8c93b91ca3e1/ENCFF056JUS.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption, low read depth ENCFF480ZQT bigWig bigWig signal p-value GRCh38 ENCSR000BGR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PBX3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF271RCM/, /files/ENCFF114FPE/, /files/ENCFF882OBA/ 847004615 ENCODE Processing Pipeline 1c02f92adbe8ed488c5b318b69f1cb08 https://www.encodeproject.org/files/ENCFF480ZQT/@@download/ENCFF480ZQT.bigWig released s3://encode-public/2020/12/26/2cfc8472-58b6-42f0-8db8-99f5a05a875b/ENCFF480ZQT.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/2cfc8472-58b6-42f0-8db8-99f5a05a875b/ENCFF480ZQT.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient replicate concordance ENCFF285BQQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PBX3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF402DQD/ 488249 ENCODE Processing Pipeline 5e8a0df0c46dd2882db8aff30e503148 https://www.encodeproject.org/files/ENCFF285BQQ/@@download/ENCFF285BQQ.bigBed released s3://encode-public/2020/12/26/eda40543-ba65-4944-b822-6f9b4b9eaba3/ENCFF285BQQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/eda40543-ba65-4944-b822-6f9b4b9eaba3/ENCFF285BQQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient replicate concordance ENCFF402DQD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PBX3-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF356LFX/, /files/ENCFF075XYL/, /files/ENCFF271RCM/, /files/ENCFF114FPE/, /files/ENCFF882OBA/ 222293 ENCODE Processing Pipeline 53e0ad8a2cb23cd7a4e744e097ac7c44 https://www.encodeproject.org/files/ENCFF402DQD/@@download/ENCFF402DQD.bed.gz released s3://encode-public/2020/12/26/12957dcd-9e6b-4432-9758-b416fe056e72/ENCFF402DQD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/12957dcd-9e6b-4432-9758-b416fe056e72/ENCFF402DQD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth insufficient replicate concordance ENCFF193HGA bigWig bigWig signal p-value GRCh38 ENCSR000BMQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EGR1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF849AGI/, /files/ENCFF449ZMP/ 506523969 ENCODE Processing Pipeline 381bad33ca0e13d15a4689dff256c543 https://www.encodeproject.org/files/ENCFF193HGA/@@download/ENCFF193HGA.bigWig released s3://encode-public/2020/12/11/b31476b1-1d0a-4819-8a46-8dec2fdf8711/ENCFF193HGA.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/11/b31476b1-1d0a-4819-8a46-8dec2fdf8711/ENCFF193HGA.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF092DJY bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BMQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EGR1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF637UJN/ 662727 ENCODE Processing Pipeline 3e2b14325e7cb38a2279ab1b77b51906 https://www.encodeproject.org/files/ENCFF092DJY/@@download/ENCFF092DJY.bigBed released s3://encode-public/2020/12/11/4db77e4c-e98b-4b28-9c3b-94ef4cb98f34/ENCFF092DJY.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/11/4db77e4c-e98b-4b28-9c3b-94ef4cb98f34/ENCFF092DJY.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF637UJN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BMQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EGR1-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF554UVL/, /files/ENCFF849AGI/, /files/ENCFF449ZMP/, /files/ENCFF356LFX/ 364268 ENCODE Processing Pipeline 4b3398f1a9525638dc40f8b371904505 https://www.encodeproject.org/files/ENCFF637UJN/@@download/ENCFF637UJN.bed.gz released s3://encode-public/2020/12/11/14e3700d-0ef4-4dd5-a606-f274c5e856f0/ENCFF637UJN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/11/14e3700d-0ef4-4dd5-a606-f274c5e856f0/ENCFF637UJN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, moderate library complexity, low read depth, borderline replicate concordance, mild to moderate bottlenecking ENCFF011BMN bigWig bigWig signal p-value GRCh38 ENCSR332EYT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT1-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF440ACE/, /files/ENCFF783FZL/, /files/ENCFF526SHJ/, /files/ENCFF526WYZ/ 2021698677 ENCODE Processing Pipeline 70326658e1c544574e7b72554ee96c93 https://www.encodeproject.org/files/ENCFF011BMN/@@download/ENCFF011BMN.bigWig released s3://encode-public/2020/11/28/1292b573-4050-44bc-abfc-03bef4a1ef03/ENCFF011BMN.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/28/1292b573-4050-44bc-abfc-03bef4a1ef03/ENCFF011BMN.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF973ACG bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR332EYT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT1-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF440ACE/, /files/ENCFF526SHJ/, /files/ENCFF356LFX/, /files/ENCFF783FZL/, /files/ENCFF526WYZ/ 106128 ENCODE Processing Pipeline 4e4f15c238139508d07788a5cea7f0d0 https://www.encodeproject.org/files/ENCFF973ACG/@@download/ENCFF973ACG.bed.gz released s3://encode-public/2020/11/28/0b579f39-5ee6-4c64-a7a9-946497f06b8f/ENCFF973ACG.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/28/0b579f39-5ee6-4c64-a7a9-946497f06b8f/ENCFF973ACG.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF655XMZ bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR332EYT TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens STAT1-human DNA 2014-07-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF973ACG/ 248549 ENCODE Processing Pipeline cd0c360b94f9e61f68a85885b3e7c8fd https://www.encodeproject.org/files/ENCFF655XMZ/@@download/ENCFF655XMZ.bigBed released s3://encode-public/2020/11/28/d8466c15-519e-439a-9dc3-c7a730962fd2/ENCFF655XMZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/28/d8466c15-519e-439a-9dc3-c7a730962fd2/ENCFF655XMZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF063QHK bigWig bigWig signal p-value GRCh38 ENCSR016UEH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TARDBP-human DNA 2016-11-08 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF776NRF/, /files/ENCFF612NNB/, /files/ENCFF707WGY/, /files/ENCFF923QPK/ 853356803 ENCODE Processing Pipeline 36f7cabba17ffa0f10a48b4e3b92d43f https://www.encodeproject.org/files/ENCFF063QHK/@@download/ENCFF063QHK.bigWig released s3://encode-public/2021/02/04/422e4d39-7ee2-4115-ad33-fc46aff14829/ENCFF063QHK.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/422e4d39-7ee2-4115-ad33-fc46aff14829/ENCFF063QHK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF701YIT bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR016UEH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TARDBP-human DNA 2016-11-08 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF847AAV/ 272134 ENCODE Processing Pipeline 522409b26f75ed95bf616a5179e7a34a https://www.encodeproject.org/files/ENCFF701YIT/@@download/ENCFF701YIT.bigBed released s3://encode-public/2021/02/04/39fdd091-7a0b-462d-aac5-c199cef0f5b2/ENCFF701YIT.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/39fdd091-7a0b-462d-aac5-c199cef0f5b2/ENCFF701YIT.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF847AAV bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR016UEH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TARDBP-human DNA 2016-11-08 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF612NNB/, /files/ENCFF776NRF/, /files/ENCFF707WGY/, /files/ENCFF923QPK/ 119630 ENCODE Processing Pipeline 5c9675915722c346ad5d66a0ad28cab4 https://www.encodeproject.org/files/ENCFF847AAV/@@download/ENCFF847AAV.bed.gz released s3://encode-public/2021/02/04/6ef01ae4-08ed-425e-b445-33ba466d572a/ENCFF847AAV.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/6ef01ae4-08ed-425e-b445-33ba466d572a/ENCFF847AAV.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF179MUG bigWig bigWig signal p-value GRCh38 ENCSR437GBJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFATC3-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF377KFK/, /files/ENCFF828IJJ/, /files/ENCFF526WYZ/, /files/ENCFF232AKP/, /files/ENCFF207IHK/ 4101697531 ENCODE Processing Pipeline c660d8108a864c348e82d47e4b5e2714 https://www.encodeproject.org/files/ENCFF179MUG/@@download/ENCFF179MUG.bigWig released s3://encode-public/2020/12/08/8ea9c746-be19-4001-baca-cd48ece97db2/ENCFF179MUG.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/08/8ea9c746-be19-4001-baca-cd48ece97db2/ENCFF179MUG.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms poor library complexity, partially characterized antibody, severe bottlenecking ENCFF340KVJ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR437GBJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFATC3-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF002XEC/ 940744 ENCODE Processing Pipeline 73f063d318c93ecb326816c4178f6e7e https://www.encodeproject.org/files/ENCFF340KVJ/@@download/ENCFF340KVJ.bigBed released s3://encode-public/2020/12/08/683b48f7-da9c-4243-b8ca-4d928f21b902/ENCFF340KVJ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/08/683b48f7-da9c-4243-b8ca-4d928f21b902/ENCFF340KVJ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms poor library complexity, partially characterized antibody, severe bottlenecking ENCFF002XEC bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR437GBJ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFATC3-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF377KFK/, /files/ENCFF356LFX/, /files/ENCFF828IJJ/, /files/ENCFF526WYZ/, /files/ENCFF232AKP/, /files/ENCFF207IHK/ 475948 ENCODE Processing Pipeline a79736d09239335af4a9a370042f39cd https://www.encodeproject.org/files/ENCFF002XEC/@@download/ENCFF002XEC.bed.gz released s3://encode-public/2020/12/08/4fa76d72-689f-4e31-a782-2c5d270f5752/ENCFF002XEC.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/08/4fa76d72-689f-4e31-a782-2c5d270f5752/ENCFF002XEC.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, inconsistent platforms poor library complexity, partially characterized antibody, severe bottlenecking ENCFF051AGM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR549NPZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBX3-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF670JSE/ 95845 ENCODE Processing Pipeline 541eeb46d82056353c9dfe5c201a7401 https://www.encodeproject.org/files/ENCFF051AGM/@@download/ENCFF051AGM.bigBed released s3://encode-public/2020/12/01/acdcf8fb-9a70-4607-a9eb-69d2603a14e5/ENCFF051AGM.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/acdcf8fb-9a70-4607-a9eb-69d2603a14e5/ENCFF051AGM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth ENCFF561TEK bigWig bigWig signal p-value GRCh38 ENCSR549NPZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBX3-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF490CWU/, /files/ENCFF748NUK/, /files/ENCFF994WVU/, /files/ENCFF640LQQ/, /files/ENCFF556URJ/, /files/ENCFF834ZDP/ 1618054288 ENCODE Processing Pipeline a1b87953adca49f278e7621e00a2cf09 https://www.encodeproject.org/files/ENCFF561TEK/@@download/ENCFF561TEK.bigWig released s3://encode-public/2020/12/01/491d32a1-ccd4-4eec-9f40-d91ebb3c154b/ENCFF561TEK.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/491d32a1-ccd4-4eec-9f40-d91ebb3c154b/ENCFF561TEK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth ENCFF670JSE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR549NPZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CBX3-human DNA 2016-11-23 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF490CWU/, /files/ENCFF748NUK/, /files/ENCFF356LFX/, /files/ENCFF994WVU/, /files/ENCFF640LQQ/, /files/ENCFF556URJ/, /files/ENCFF834ZDP/ 5850 ENCODE Processing Pipeline 61bb20d5d445d18a1cc4fe6380ce0057 https://www.encodeproject.org/files/ENCFF670JSE/@@download/ENCFF670JSE.bed.gz released s3://encode-public/2020/12/01/a6437b9c-c32e-411f-b215-3b08c4c7887e/ENCFF670JSE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/a6437b9c-c32e-411f-b215-3b08c4c7887e/ENCFF670JSE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, low read depth ENCFF381KVT bigWig bigWig signal p-value GRCh38 ENCSR835XKS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TRIM22-human DNA 2016-07-28 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF783FZL/, /files/ENCFF909ZUA/, /files/ENCFF870NKL/ 1829551445 ENCODE Processing Pipeline 4704d5ed8c65c2ed3ada963287113722 https://www.encodeproject.org/files/ENCFF381KVT/@@download/ENCFF381KVT.bigWig released s3://encode-public/2020/12/01/05e2485a-ee29-495f-bfcf-5570ff3db1ff/ENCFF381KVT.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/05e2485a-ee29-495f-bfcf-5570ff3db1ff/ENCFF381KVT.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read depth ENCFF919OMX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR835XKS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TRIM22-human DNA 2016-07-28 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF796RRA/ 1303732 ENCODE Processing Pipeline c747477cccd3d69a7baaed954cad3ca1 https://www.encodeproject.org/files/ENCFF919OMX/@@download/ENCFF919OMX.bigBed released s3://encode-public/2020/12/01/22e22495-3f90-4369-a686-547899a80bfe/ENCFF919OMX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/22e22495-3f90-4369-a686-547899a80bfe/ENCFF919OMX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read depth ENCFF796RRA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR835XKS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TRIM22-human DNA 2016-07-28 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF909ZUA/, /files/ENCFF526WYZ/, /files/ENCFF870NKL/, /files/ENCFF356LFX/ 642011 ENCODE Processing Pipeline 787904add27f59a4af1712d6892af11b https://www.encodeproject.org/files/ENCFF796RRA/@@download/ENCFF796RRA.bed.gz released s3://encode-public/2020/12/01/9a3c7086-611a-414a-b26c-01fecf8c9f4a/ENCFF796RRA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/9a3c7086-611a-414a-b26c-01fecf8c9f4a/ENCFF796RRA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read depth ENCFF263UKR bigWig bigWig signal p-value GRCh38 ENCSR861JUQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOXK2-human DNA 2017-01-27 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF297OGU/, /files/ENCFF232AKP/, /files/ENCFF805NWO/ 2199590209 ENCODE Processing Pipeline 4b9f9560ca65d34a1dc1c2f86a1d2962 https://www.encodeproject.org/files/ENCFF263UKR/@@download/ENCFF263UKR.bigWig released s3://encode-public/2020/12/01/b3287645-dfb9-470b-a4ae-d247c0bc0cda/ENCFF263UKR.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/b3287645-dfb9-470b-a4ae-d247c0bc0cda/ENCFF263UKR.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF546FJN bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR861JUQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOXK2-human DNA 2017-01-27 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF639XYN/ 235285 ENCODE Processing Pipeline cf22cf2c14b346c5e5f871145205a36f https://www.encodeproject.org/files/ENCFF546FJN/@@download/ENCFF546FJN.bigBed released s3://encode-public/2020/12/01/0b0580af-1d18-4f4d-80c5-29ad38f96ed0/ENCFF546FJN.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/0b0580af-1d18-4f4d-80c5-29ad38f96ed0/ENCFF546FJN.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF639XYN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR861JUQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens FOXK2-human DNA 2017-01-27 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF297OGU/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF356LFX/, /files/ENCFF805NWO/ 93905 ENCODE Processing Pipeline 8fd7c812dd4de560a866d9089377c258 https://www.encodeproject.org/files/ENCFF639XYN/@@download/ENCFF639XYN.bed.gz released s3://encode-public/2020/12/01/fb24d4f2-8fd8-48fc-9931-04c996286d08/ENCFF639XYN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/fb24d4f2-8fd8-48fc-9931-04c996286d08/ENCFF639XYN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF884QQW bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR177VFS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2B-human DNA 2018-02-13 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF356LFX/, /files/ENCFF825OSX/, /files/ENCFF975LGL/, /files/ENCFF377KFK/ 728009 ENCODE Processing Pipeline bd698cc089132f62702fea9189d128a7 https://www.encodeproject.org/files/ENCFF884QQW/@@download/ENCFF884QQW.bed.gz released s3://encode-public/2020/12/30/ac06c6fb-4e7c-4617-9559-588ed4b561b0/ENCFF884QQW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/30/ac06c6fb-4e7c-4617-9559-588ed4b561b0/ENCFF884QQW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity poor library complexity, partially characterized antibody, severe bottlenecking ENCFF715JTY bigWig bigWig signal p-value GRCh38 ENCSR177VFS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2B-human DNA 2018-02-13 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF975LGL/, /files/ENCFF232AKP/, /files/ENCFF825OSX/, /files/ENCFF377KFK/ 2084986959 ENCODE Processing Pipeline d9ebecf564c39eaeb34d0df7a4ef6133 https://www.encodeproject.org/files/ENCFF715JTY/@@download/ENCFF715JTY.bigWig released s3://encode-public/2020/12/30/f2782c4b-8d53-4c28-9f27-bcf495ee1b90/ENCFF715JTY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/30/f2782c4b-8d53-4c28-9f27-bcf495ee1b90/ENCFF715JTY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity poor library complexity, partially characterized antibody, severe bottlenecking ENCFF427QAI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR177VFS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens MEF2B-human DNA 2018-02-13 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF884QQW/ 1656187 ENCODE Processing Pipeline 5cdba1e4dc6c39e74a572d0517beee32 https://www.encodeproject.org/files/ENCFF427QAI/@@download/ENCFF427QAI.bigBed released s3://encode-public/2020/12/30/beb1df13-5703-4ba5-9b6d-9eb22aa537a4/ENCFF427QAI.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/30/beb1df13-5703-4ba5-9b6d-9eb22aa537a4/ENCFF427QAI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity poor library complexity, partially characterized antibody, severe bottlenecking ENCFF066HPG bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR961PPA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF2-human DNA 2016-10-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF213LSA/ 660459 ENCODE Processing Pipeline a4307b340c673682653660d7321f70ec https://www.encodeproject.org/files/ENCFF066HPG/@@download/ENCFF066HPG.bigBed released s3://encode-public/2020/12/01/1a8e634d-2d3b-4415-9f74-c11ee174a4da/ENCFF066HPG.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/1a8e634d-2d3b-4415-9f74-c11ee174a4da/ENCFF066HPG.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth poor library complexity, severe bottlenecking ENCFF295GYI bigWig bigWig signal p-value GRCh38 ENCSR961PPA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF2-human DNA 2016-10-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF956ZQI/, /files/ENCFF920SPT/, /files/ENCFF232AKP/, /files/ENCFF377KFK/ 2157839732 ENCODE Processing Pipeline 36e6687afcde3bac6a13442c0dbda6e5 https://www.encodeproject.org/files/ENCFF295GYI/@@download/ENCFF295GYI.bigWig released s3://encode-public/2020/12/01/17a66b98-eb1d-428f-b2d7-3f733eab76d3/ENCFF295GYI.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/17a66b98-eb1d-428f-b2d7-3f733eab76d3/ENCFF295GYI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth poor library complexity, severe bottlenecking ENCFF213LSA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR961PPA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ATF2-human DNA 2016-10-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF956ZQI/, /files/ENCFF920SPT/ 322186 ENCODE Processing Pipeline 622bd4de4e35bbf374698063aa0ade7f https://www.encodeproject.org/files/ENCFF213LSA/@@download/ENCFF213LSA.bed.gz released s3://encode-public/2020/12/01/69f61e03-f03d-4ab4-bffc-d206e57cc0ef/ENCFF213LSA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/69f61e03-f03d-4ab4-bffc-d206e57cc0ef/ENCFF213LSA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth poor library complexity, severe bottlenecking ENCFF655GBI bigWig bigWig signal p-value GRCh38 ENCSR976TBC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF5-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF510PTR/, /files/ENCFF526WYZ/, /files/ENCFF881PDA/ 2026401237 ENCODE Processing Pipeline 2588858cf11f8e87bb01d8882586cfd9 https://www.encodeproject.org/files/ENCFF655GBI/@@download/ENCFF655GBI.bigWig released s3://encode-public/2020/11/30/32468cc7-d2a8-4ba2-84f0-2e864e94110c/ENCFF655GBI.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/30/32468cc7-d2a8-4ba2-84f0-2e864e94110c/ENCFF655GBI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF478SRO bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR976TBC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF5-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF510PTR/, /files/ENCFF526WYZ/, /files/ENCFF356LFX/, /files/ENCFF881PDA/ 39360 ENCODE Processing Pipeline 3c63d6c7f40aff208210d69e5e5b2a38 https://www.encodeproject.org/files/ENCFF478SRO/@@download/ENCFF478SRO.bed.gz released s3://encode-public/2020/11/30/7b897266-028c-4273-86e7-c34120a71224/ENCFF478SRO.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/30/7b897266-028c-4273-86e7-c34120a71224/ENCFF478SRO.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF562PPN bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR976TBC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IRF5-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF478SRO/ 125977 ENCODE Processing Pipeline 847390e60d6899c67165c56dd6690630 https://www.encodeproject.org/files/ENCFF562PPN/@@download/ENCFF562PPN.bigBed released s3://encode-public/2020/11/30/b52306a8-b6f5-440a-b014-6dc099f82eb6/ENCFF562PPN.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/30/b52306a8-b6f5-440a-b014-6dc099f82eb6/ENCFF562PPN.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF825XTN bigWig bigWig signal p-value GRCh38 ENCSR680UQE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF2-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF806BUE/, /files/ENCFF210IIT/, /files/ENCFF232AKP/ 1885556890 ENCODE Processing Pipeline 311859edf41a834b1a2f34766b4f51c4 https://www.encodeproject.org/files/ENCFF825XTN/@@download/ENCFF825XTN.bigWig released s3://encode-public/2020/12/02/881aa9f2-e730-4b48-bfbd-7e335f3b60d5/ENCFF825XTN.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/881aa9f2-e730-4b48-bfbd-7e335f3b60d5/ENCFF825XTN.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF723ZRN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR680UQE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF2-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF210IIT/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF806BUE/, /files/ENCFF356LFX/ 882139 ENCODE Processing Pipeline 23ae14b94db9a737e2b7954ba880c769 https://www.encodeproject.org/files/ENCFF723ZRN/@@download/ENCFF723ZRN.bed.gz released s3://encode-public/2020/12/02/49fb4cf5-1b59-4a1f-bc7e-d4b36ad2b850/ENCFF723ZRN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/49fb4cf5-1b59-4a1f-bc7e-d4b36ad2b850/ENCFF723ZRN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF918AID bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR680UQE TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF2-human DNA 2017-02-21 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF723ZRN/ 1891598 ENCODE Processing Pipeline 5333a5bc5f3da559166cf3025efe83c9 https://www.encodeproject.org/files/ENCFF918AID/@@download/ENCFF918AID.bigBed released s3://encode-public/2020/12/02/b0544b77-dcee-4c5c-9d46-b1d693e7df69/ENCFF918AID.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/b0544b77-dcee-4c5c-9d46-b1d693e7df69/ENCFF918AID.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF322NNB bigWig bigWig signal p-value GRCh38 ENCSR711XNY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PKNOX1-human DNA 2016-11-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF359OVA/, /files/ENCFF526WYZ/, /files/ENCFF568MVO/, /files/ENCFF783FZL/ 1819015961 ENCODE Processing Pipeline 86de8cf53326b6a35eb1258a2b90b283 https://www.encodeproject.org/files/ENCFF322NNB/@@download/ENCFF322NNB.bigWig released s3://encode-public/2020/12/02/6a1d8b2e-c6fa-4dfe-93a7-00bd6e82c67a/ENCFF322NNB.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/6a1d8b2e-c6fa-4dfe-93a7-00bd6e82c67a/ENCFF322NNB.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF946JFA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR711XNY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PKNOX1-human DNA 2016-11-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF359OVA/, /files/ENCFF568MVO/, /files/ENCFF356LFX/, /files/ENCFF783FZL/, /files/ENCFF526WYZ/ 609495 ENCODE Processing Pipeline 1b664a58c27b7933ca6a66593d60f821 https://www.encodeproject.org/files/ENCFF946JFA/@@download/ENCFF946JFA.bed.gz released s3://encode-public/2020/12/02/394bee3b-59ab-46d0-849a-8188e7c4a2f7/ENCFF946JFA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/394bee3b-59ab-46d0-849a-8188e7c4a2f7/ENCFF946JFA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF589FCY bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR711XNY TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens PKNOX1-human DNA 2016-11-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF946JFA/ 1275964 ENCODE Processing Pipeline 2a1a93b2080f1281e65c38456514b7b9 https://www.encodeproject.org/files/ENCFF589FCY/@@download/ENCFF589FCY.bigBed released s3://encode-public/2020/12/02/df817b2c-1841-4df2-827a-b5e932143368/ENCFF589FCY.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/df817b2c-1841-4df2-827a-b5e932143368/ENCFF589FCY.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF314XVK bigWig bigWig signal p-value GRCh38 ENCSR793HVL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E2F8-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF830RYD/, /files/ENCFF783FZL/, /files/ENCFF526WYZ/, /files/ENCFF785HHC/ 1621685376 ENCODE Processing Pipeline c97745921feb69c83b5cef6192cf5351 https://www.encodeproject.org/files/ENCFF314XVK/@@download/ENCFF314XVK.bigWig released s3://encode-public/2020/12/03/637da70b-d8bb-4581-bd7f-a41ce88f6084/ENCFF314XVK.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/637da70b-d8bb-4581-bd7f-a41ce88f6084/ENCFF314XVK.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth partially characterized antibody ENCFF961ZFW bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR793HVL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E2F8-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF785HHC/, /files/ENCFF356LFX/, /files/ENCFF830RYD/, /files/ENCFF783FZL/ 100859 ENCODE Processing Pipeline f0d0e32b583d19e3fd33871a6d0142b1 https://www.encodeproject.org/files/ENCFF961ZFW/@@download/ENCFF961ZFW.bed.gz released s3://encode-public/2020/12/03/df8f8e0a-710b-4dd4-8689-f74ccdbffc21/ENCFF961ZFW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/df8f8e0a-710b-4dd4-8689-f74ccdbffc21/ENCFF961ZFW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth partially characterized antibody ENCFF910KAC bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR793HVL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E2F8-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF961ZFW/ 250179 ENCODE Processing Pipeline 76d8680d133089315dc0bfbb532aed4f https://www.encodeproject.org/files/ENCFF910KAC/@@download/ENCFF910KAC.bigBed released s3://encode-public/2020/12/03/c9262784-093d-48cf-855b-27e87bf8ebd6/ENCFF910KAC.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/c9262784-093d-48cf-855b-27e87bf8ebd6/ENCFF910KAC.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth partially characterized antibody ENCFF757ZKU bigWig bigWig signal p-value GRCh38 ENCSR933EYC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDAC6-human DNA 2017-12-14 ENCODE sonication (generic) 200-600 1 1_1 /files/ENCFF346AWT/, /files/ENCFF834ZDP/, /files/ENCFF748NUK/, /files/ENCFF556URJ/, /files/ENCFF994WVU/ 1653003403 ENCODE Processing Pipeline f4650307353dd1c7520c22ff9fab2592 https://www.encodeproject.org/files/ENCFF757ZKU/@@download/ENCFF757ZKU.bigWig released s3://encode-public/2021/07/08/d407a040-cc62-4b2f-ae26-8b8e2bdc77eb/ENCFF757ZKU.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/07/08/d407a040-cc62-4b2f-ae26-8b8e2bdc77eb/ENCFF757ZKU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released antibody characterized with exemption unreplicated experiment ENCFF588SBL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR933EYC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDAC6-human DNA 2017-12-14 ENCODE sonication (generic) 200-600 1 1_1 /files/ENCFF356LFX/, /files/ENCFF346AWT/, /files/ENCFF834ZDP/, /files/ENCFF748NUK/, /files/ENCFF556URJ/, /files/ENCFF994WVU/ 81525 ENCODE Processing Pipeline 6a90b39f69e85abeab0a6961f905ea45 https://www.encodeproject.org/files/ENCFF588SBL/@@download/ENCFF588SBL.bed.gz released s3://encode-public/2021/07/08/fb93bb9a-6648-4f75-803b-9458d68830f9/ENCFF588SBL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/07/08/fb93bb9a-6648-4f75-803b-9458d68830f9/ENCFF588SBL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released antibody characterized with exemption unreplicated experiment ENCFF918SGD bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR933EYC TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDAC6-human DNA 2017-12-14 ENCODE sonication (generic) 200-600 1 1_1 /files/ENCFF588SBL/ 208625 ENCODE Processing Pipeline f3c28b8860d6001871c7347ebd3c3fb3 https://www.encodeproject.org/files/ENCFF918SGD/@@download/ENCFF918SGD.bigBed released s3://encode-public/2021/07/08/3b8dd51c-8ef4-48ae-a557-4af1c6ccc4ac/ENCFF918SGD.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/07/08/3b8dd51c-8ef4-48ae-a557-4af1c6ccc4ac/ENCFF918SGD.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.8.0 GRCh38 released antibody characterized with exemption unreplicated experiment ENCFF855PXT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR439WAF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E4F1-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF359RBL/, /files/ENCFF443FEI/, /files/ENCFF356LFX/, /files/ENCFF783FZL/ 97014 ENCODE Processing Pipeline a26a71750efb9c9d2462c8031393da11 https://www.encodeproject.org/files/ENCFF855PXT/@@download/ENCFF855PXT.bed.gz released s3://encode-public/2020/12/30/07fd62fa-5b30-4c7a-90b1-d367f3d5cb0b/ENCFF855PXT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/30/07fd62fa-5b30-4c7a-90b1-d367f3d5cb0b/ENCFF855PXT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking partially characterized antibody ENCFF007QKJ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR439WAF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E4F1-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF855PXT/ 202627 ENCODE Processing Pipeline 0037eb05805e934ac244955494426d91 https://www.encodeproject.org/files/ENCFF007QKJ/@@download/ENCFF007QKJ.bigBed released s3://encode-public/2020/12/30/6d8c87fc-92ea-4c2a-b656-14bc194fa09d/ENCFF007QKJ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/30/6d8c87fc-92ea-4c2a-b656-14bc194fa09d/ENCFF007QKJ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking partially characterized antibody ENCFF586RSP bigWig bigWig signal p-value GRCh38 ENCSR439WAF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens E4F1-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF443FEI/, /files/ENCFF526WYZ/, /files/ENCFF783FZL/, /files/ENCFF359RBL/ 2007999336 ENCODE Processing Pipeline df83d052fc9543f9e20d9f7db08aca54 https://www.encodeproject.org/files/ENCFF586RSP/@@download/ENCFF586RSP.bigWig released s3://encode-public/2020/12/30/d8f20d3d-09a6-4458-9623-44121a0865d0/ENCFF586RSP.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/30/d8f20d3d-09a6-4458-9623-44121a0865d0/ENCFF586RSP.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking partially characterized antibody ENCFF831TWO bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR590KEQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ARNT-human DNA 2017-11-14 ENCODE 450-650 2, 3 2_1, 3_1 /files/ENCFF596RIT/ 739330 ENCODE Processing Pipeline dd095f25b8359e6bf423cecf53a733ce https://www.encodeproject.org/files/ENCFF831TWO/@@download/ENCFF831TWO.bigBed released s3://encode-public/2020/12/03/ddd7dc55-3d63-448f-a678-c6386f147958/ENCFF831TWO.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/ddd7dc55-3d63-448f-a678-c6386f147958/ENCFF831TWO.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF538DNI bigWig bigWig signal p-value GRCh38 ENCSR590KEQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ARNT-human DNA 2017-11-14 ENCODE 450-650 2, 3 2_1, 3_1 /files/ENCFF377KFK/, /files/ENCFF232AKP/, /files/ENCFF209QIF/, /files/ENCFF458NGB/ 1815780800 ENCODE Processing Pipeline 3f05981f9bbbec360fe62df2ee2660c0 https://www.encodeproject.org/files/ENCFF538DNI/@@download/ENCFF538DNI.bigWig released s3://encode-public/2020/12/03/90c3960c-9b65-49ca-9a28-94fef308747d/ENCFF538DNI.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/90c3960c-9b65-49ca-9a28-94fef308747d/ENCFF538DNI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF596RIT bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR590KEQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ARNT-human DNA 2017-11-14 ENCODE 450-650 2, 3 2_1, 3_1 /files/ENCFF377KFK/, /files/ENCFF232AKP/, /files/ENCFF209QIF/, /files/ENCFF356LFX/, /files/ENCFF458NGB/ 356592 ENCODE Processing Pipeline 1b6ae8af0a29cc99c895e2cd502a439c https://www.encodeproject.org/files/ENCFF596RIT/@@download/ENCFF596RIT.bed.gz released s3://encode-public/2020/12/03/3cf18c80-324a-4852-b2cb-0c6f52518c61/ENCFF596RIT.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/3cf18c80-324a-4852-b2cb-0c6f52518c61/ENCFF596RIT.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF435JXH bigWig bigWig signal p-value hg19 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF562TOQ/, /files/ENCFF485RWA/, /files/ENCFF620EZL/, /files/ENCFF602SNK/ 1090185106 ENCODE Processing Pipeline 736287690931cd6fabb3805c4c375810 https://www.encodeproject.org/files/ENCFF435JXH/@@download/ENCFF435JXH.bigWig released s3://encode-public/2016/11/14/29b83ad6-3e38-4b7f-addc-61439cb78975/ENCFF435JXH.bigWig https://datasetencode.blob.core.windows.net/dataset/2016/11/14/29b83ad6-3e38-4b7f-addc-61439cb78975/ENCFF435JXH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE3 hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF336YAH bigWig bigWig signal p-value GRCh38 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF401XXH/, /files/ENCFF898CWV/, /files/ENCFF279PAE/, /files/ENCFF142VHH/ 1259602243 ENCODE Processing Pipeline fc1d30f0108e663bac983f5a04b451ed https://www.encodeproject.org/files/ENCFF336YAH/@@download/ENCFF336YAH.bigWig released s3://encode-public/2016/11/14/7d836c27-a489-4a1a-9b31-6d07da3712fa/ENCFF336YAH.bigWig https://datasetencode.blob.core.windows.net/dataset/2016/11/14/7d836c27-a489-4a1a-9b31-6d07da3712fa/ENCFF336YAH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE3 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF655FLB bigBed narrowPeak bigBed narrowPeak optimal IDR thresholded peaks GRCh38 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF096XRG/ 339605 ENCODE Processing Pipeline 25d5d2b277b42e9baea23484fec46d73 https://www.encodeproject.org/files/ENCFF655FLB/@@download/ENCFF655FLB.bigBed released s3://encode-public/2016/11/14/bedc3208-d83d-4497-98a7-ecb2a9b590f9/ENCFF655FLB.bigBed https://datasetencode.blob.core.windows.net/dataset/2016/11/14/bedc3208-d83d-4497-98a7-ecb2a9b590f9/ENCFF655FLB.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE3 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF096XRG bed narrowPeak bed narrowPeak optimal IDR thresholded peaks GRCh38 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF419RSJ/, /files/ENCFF386BDU/, /files/ENCFF413AVP/, /files/ENCFF056UDK/ 134070 ENCODE Processing Pipeline 09621cf52ce936bec51f40622f0870ab https://www.encodeproject.org/files/ENCFF096XRG/@@download/ENCFF096XRG.bed.gz released s3://encode-public/2016/11/14/f23a027a-96dd-4cea-93a1-ee641b4cc554/ENCFF096XRG.bed.gz https://datasetencode.blob.core.windows.net/dataset/2016/11/14/f23a027a-96dd-4cea-93a1-ee641b4cc554/ENCFF096XRG.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE3 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF917CXD bed narrowPeak bed narrowPeak optimal IDR thresholded peaks hg19 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF001TDO/, /files/ENCFF801ULT/, /files/ENCFF684QPN/, /files/ENCFF217GDM/ 136236 ENCODE Processing Pipeline 80e778a2362eb91eb3f36ec00813c9d6 https://www.encodeproject.org/files/ENCFF917CXD/@@download/ENCFF917CXD.bed.gz released s3://encode-public/2016/11/14/d9ab123f-b4d9-4e2e-adb9-ccfe31358a37/ENCFF917CXD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2016/11/14/d9ab123f-b4d9-4e2e-adb9-ccfe31358a37/ENCFF917CXD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE3 hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF818IPG bigBed narrowPeak bigBed narrowPeak optimal IDR thresholded peaks hg19 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF917CXD/ 341603 ENCODE Processing Pipeline 6cedc1b5816bbe839faf367b5735cd1e https://www.encodeproject.org/files/ENCFF818IPG/@@download/ENCFF818IPG.bigBed released s3://encode-public/2016/11/14/44587797-d2b1-43e6-adfc-381d4aa1e7af/ENCFF818IPG.bigBed https://datasetencode.blob.core.windows.net/dataset/2016/11/14/44587797-d2b1-43e6-adfc-381d4aa1e7af/ENCFF818IPG.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE3 hg19 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF844JPO bigWig bigWig signal p-value GRCh38 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF748NUK/, /files/ENCFF556URJ/, /files/ENCFF834ZDP/, /files/ENCFF994WVU/, /files/ENCFF536XNC/, /files/ENCFF741HFQ/ 1846953270 ENCODE Processing Pipeline f2d929abbc7029641f31570118e49bb5 https://www.encodeproject.org/files/ENCFF844JPO/@@download/ENCFF844JPO.bigWig released s3://encode-public/2021/02/04/a9be0e64-500f-4219-8b47-cd9f6b93df2e/ENCFF844JPO.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/a9be0e64-500f-4219-8b47-cd9f6b93df2e/ENCFF844JPO.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF552EPA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF748NUK/, /files/ENCFF556URJ/, /files/ENCFF834ZDP/, /files/ENCFF994WVU/, /files/ENCFF536XNC/, /files/ENCFF741HFQ/, /files/ENCFF356LFX/ 122206 ENCODE Processing Pipeline 75a7ecfeb65f04a38969cc492a4fd85c https://www.encodeproject.org/files/ENCFF552EPA/@@download/ENCFF552EPA.bed.gz released s3://encode-public/2021/02/04/470389a3-23e8-4b2c-944b-16722abe4333/ENCFF552EPA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/470389a3-23e8-4b2c-944b-16722abe4333/ENCFF552EPA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF143PXG bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR849WCQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ASH2L-human DNA 2017-01-08 ENCODE sonication (generic) 300-600, 200-600 1, 2 1_1, 2_1 /files/ENCFF552EPA/ 271486 ENCODE Processing Pipeline 64af90ca9ee95faa638734448e2a2c83 https://www.encodeproject.org/files/ENCFF143PXG/@@download/ENCFF143PXG.bigBed released s3://encode-public/2021/02/04/f1d6cb5a-c590-40f6-9d7c-23b4559bc1b7/ENCFF143PXG.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/f1d6cb5a-c590-40f6-9d7c-23b4559bc1b7/ENCFF143PXG.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF229JKZ bigWig bigWig signal p-value GRCh38 ENCSR391IWM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KDM1A-human DNA 2016-11-24 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF500VLK/, /files/ENCFF556URJ/, /files/ENCFF067FQB/, /files/ENCFF994WVU/, /files/ENCFF748NUK/, /files/ENCFF834ZDP/ 1827188551 ENCODE Processing Pipeline 087e6f13081d225b13c6a4636e49f08a https://www.encodeproject.org/files/ENCFF229JKZ/@@download/ENCFF229JKZ.bigWig released s3://encode-public/2021/02/04/ae562dd3-bb80-4ad0-961f-0711a910b6f5/ENCFF229JKZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/ae562dd3-bb80-4ad0-961f-0711a910b6f5/ENCFF229JKZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF996NUD bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR391IWM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KDM1A-human DNA 2016-11-24 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF500VLK/, /files/ENCFF556URJ/, /files/ENCFF356LFX/, /files/ENCFF067FQB/, /files/ENCFF994WVU/, /files/ENCFF748NUK/, /files/ENCFF834ZDP/ 9307 ENCODE Processing Pipeline e37a53d8e3ae0e98b36b05c58b4132f8 https://www.encodeproject.org/files/ENCFF996NUD/@@download/ENCFF996NUD.bed.gz released s3://encode-public/2021/02/04/91755d78-110f-4ed6-a121-3ed7285124a0/ENCFF996NUD.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/91755d78-110f-4ed6-a121-3ed7285124a0/ENCFF996NUD.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF868FMX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR391IWM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens KDM1A-human DNA 2016-11-24 ENCODE sonication (generic) 200-600 1, 2 1_1, 2_1 /files/ENCFF996NUD/ 68331 ENCODE Processing Pipeline 2ed213eda598722378ef54d8e0b671dc https://www.encodeproject.org/files/ENCFF868FMX/@@download/ENCFF868FMX.bigBed released s3://encode-public/2021/02/04/6b523a19-164a-40c9-965d-680966da203d/ENCFF868FMX.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/6b523a19-164a-40c9-965d-680966da203d/ENCFF868FMX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance ENCFF250ELD bigWig bigWig signal p-value GRCh38 ENCSR091BOQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SUZ12-human DNA 2018-01-17 ENCODE sonication (generic) 200-600 1 1_1 /files/ENCFF151PWJ/, /files/ENCFF834ZDP/, /files/ENCFF748NUK/, /files/ENCFF994WVU/, /files/ENCFF556URJ/ 1603238111 ENCODE Processing Pipeline 15f624c8132ddf4bfb4e33101f0a2f20 https://www.encodeproject.org/files/ENCFF250ELD/@@download/ENCFF250ELD.bigWig released s3://encode-public/2020/12/01/35630eeb-8623-4ee2-9806-c214c77c9a46/ENCFF250ELD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/35630eeb-8623-4ee2-9806-c214c77c9a46/ENCFF250ELD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption unreplicated experiment ENCFF894BBO bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR091BOQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SUZ12-human DNA 2018-01-17 ENCODE sonication (generic) 200-600 1 1_1 /files/ENCFF151PWJ/, /files/ENCFF834ZDP/, /files/ENCFF748NUK/, /files/ENCFF994WVU/, /files/ENCFF356LFX/, /files/ENCFF556URJ/ 63309 ENCODE Processing Pipeline 84cfedbe2656c3cb509d9473ee6577fe https://www.encodeproject.org/files/ENCFF894BBO/@@download/ENCFF894BBO.bed.gz released s3://encode-public/2020/12/01/74019533-ec00-422e-a27f-9ed95d135929/ENCFF894BBO.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/74019533-ec00-422e-a27f-9ed95d135929/ENCFF894BBO.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption unreplicated experiment ENCFF498QAM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR091BOQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SUZ12-human DNA 2018-01-17 ENCODE sonication (generic) 200-600 1 1_1 /files/ENCFF894BBO/ 200844 ENCODE Processing Pipeline 5e3a75d73a326d468296437d9981b2cc https://www.encodeproject.org/files/ENCFF498QAM/@@download/ENCFF498QAM.bigBed released s3://encode-public/2020/12/01/282a142e-405c-479e-984a-cbd6e139556a/ENCFF498QAM.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/282a142e-405c-479e-984a-cbd6e139556a/ENCFF498QAM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption unreplicated experiment ENCFF822IJO bigWig bigWig signal p-value GRCh38 ENCSR189YYK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB40-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF711HMY/, /files/ENCFF377KFK/, /files/ENCFF375UVD/, /files/ENCFF232AKP/ 1618606914 ENCODE Processing Pipeline 0b01d4202ebf6df3fa8e3c03d2142890 https://www.encodeproject.org/files/ENCFF822IJO/@@download/ENCFF822IJO.bigWig released s3://encode-public/2020/12/30/7ccdf29c-51e0-413a-86b8-e559688319ed/ENCFF822IJO.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/30/7ccdf29c-51e0-413a-86b8-e559688319ed/ENCFF822IJO.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF346DYM bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR189YYK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB40-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF171FMR/ 737142 ENCODE Processing Pipeline cf1fb8a14e4be602ff6d3d7e6818ac16 https://www.encodeproject.org/files/ENCFF346DYM/@@download/ENCFF346DYM.bigBed released s3://encode-public/2020/12/30/6d420159-4431-4af8-bfc4-9f23f4c2374f/ENCFF346DYM.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/30/6d420159-4431-4af8-bfc4-9f23f4c2374f/ENCFF346DYM.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF171FMR bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR189YYK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZBTB40-human DNA 2016-09-20 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF711HMY/, /files/ENCFF356LFX/, /files/ENCFF375UVD/, /files/ENCFF377KFK/, /files/ENCFF232AKP/ 328614 ENCODE Processing Pipeline fd88be387079bf68dff26ddf2f3cdc74 https://www.encodeproject.org/files/ENCFF171FMR/@@download/ENCFF171FMR.bed.gz released s3://encode-public/2020/12/30/bf18f359-c5db-4f4f-a571-6c96aa8369e5/ENCFF171FMR.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/30/bf18f359-c5db-4f4f-a571-6c96aa8369e5/ENCFF171FMR.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, moderate library complexity ENCFF511QTQ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR278SQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NBN-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF224UPF/, /files/ENCFF783FZL/, /files/ENCFF356LFX/, /files/ENCFF439GDA/ 667422 ENCODE Processing Pipeline f734df61e92da920832cdb3bf0486008 https://www.encodeproject.org/files/ENCFF511QTQ/@@download/ENCFF511QTQ.bed.gz released s3://encode-public/2020/11/28/d8f6fe4a-df8b-4282-9c6c-a4629cace7af/ENCFF511QTQ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/28/d8f6fe4a-df8b-4282-9c6c-a4629cace7af/ENCFF511QTQ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF638YLG bigWig bigWig signal p-value GRCh38 ENCSR278SQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NBN-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF783FZL/, /files/ENCFF224UPF/, /files/ENCFF439GDA/ 2001442567 ENCODE Processing Pipeline ac0a313992c6c77306bfd668c0e7cb5f https://www.encodeproject.org/files/ENCFF638YLG/@@download/ENCFF638YLG.bigWig released s3://encode-public/2020/11/28/098f05bf-cb38-4939-875f-a56042b2fe74/ENCFF638YLG.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/28/098f05bf-cb38-4939-875f-a56042b2fe74/ENCFF638YLG.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF213ZNN bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR278SQL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NBN-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF511QTQ/ 1458706 ENCODE Processing Pipeline d90fa82463fd747e9d5542eb4f20e66d https://www.encodeproject.org/files/ENCFF213ZNN/@@download/ENCFF213ZNN.bigBed released s3://encode-public/2020/11/28/34f571e9-e143-42d3-99af-88eefdadb56f/ENCFF213ZNN.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/28/34f571e9-e143-42d3-99af-88eefdadb56f/ENCFF213ZNN.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF574KFH bigWig bigWig signal p-value GRCh38 ENCSR145XQO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDGF-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF783FZL/, /files/ENCFF881IJX/, /files/ENCFF668EPR/ 2146639067 ENCODE Processing Pipeline 99e3681477a6bafae00becbfa502824c https://www.encodeproject.org/files/ENCFF574KFH/@@download/ENCFF574KFH.bigWig released s3://encode-public/2020/11/28/6938448e-f266-4b4f-96ce-6b7c59700ef9/ENCFF574KFH.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/28/6938448e-f266-4b4f-96ce-6b7c59700ef9/ENCFF574KFH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption ENCFF626TYH bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR145XQO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDGF-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF881IJX/, /files/ENCFF783FZL/, /files/ENCFF668EPR/, /files/ENCFF526WYZ/ 398583 ENCODE Processing Pipeline 094e190c0d51c8fb63367d04c04bd294 https://www.encodeproject.org/files/ENCFF626TYH/@@download/ENCFF626TYH.bed.gz released s3://encode-public/2020/11/28/a7e1effe-38c3-493e-8853-4c6ee585857d/ENCFF626TYH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/28/a7e1effe-38c3-493e-8853-4c6ee585857d/ENCFF626TYH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption ENCFF653WYI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR145XQO TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens HDGF-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF626TYH/ 918619 ENCODE Processing Pipeline 2bce59dedd1f2f38536523724b61cc45 https://www.encodeproject.org/files/ENCFF653WYI/@@download/ENCFF653WYI.bigBed released s3://encode-public/2020/11/28/5dddf839-555a-4bb4-a002-504ac172d01d/ENCFF653WYI.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/28/5dddf839-555a-4bb4-a002-504ac172d01d/ENCFF653WYI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption ENCFF928ZSR bigWig bigWig signal p-value GRCh38 ENCSR041XML TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF908DFN/, /files/ENCFF377KFK/, /files/ENCFF143EPW/ 2134393078 ENCODE Processing Pipeline 0b4f09d00c308b3c301d2a1e8f5723d5 https://www.encodeproject.org/files/ENCFF928ZSR/@@download/ENCFF928ZSR.bigWig released s3://encode-public/2020/11/29/ace48c7a-ab21-4738-85f2-c300d9d18406/ENCFF928ZSR.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/29/ace48c7a-ab21-4738-85f2-c300d9d18406/ENCFF928ZSR.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity partially characterized antibody ENCFF432PLY bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR041XML TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF143EPW/, /files/ENCFF908DFN/, /files/ENCFF356LFX/ 326514 ENCODE Processing Pipeline 4a7fb446d6ebbcfe25517ba79f59a6b7 https://www.encodeproject.org/files/ENCFF432PLY/@@download/ENCFF432PLY.bed.gz released s3://encode-public/2020/11/29/efee1cb3-2c88-4510-980d-610ba819d01a/ENCFF432PLY.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/29/efee1cb3-2c88-4510-980d-610ba819d01a/ENCFF432PLY.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity partially characterized antibody ENCFF878IIX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR041XML TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SRF-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF432PLY/ 628110 ENCODE Processing Pipeline df4d7dfaaced3d2efecb16ca6668e571 https://www.encodeproject.org/files/ENCFF878IIX/@@download/ENCFF878IIX.bigBed released s3://encode-public/2020/11/29/e3c70aa1-3e02-40b3-aad7-4e151413f693/ENCFF878IIX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/29/e3c70aa1-3e02-40b3-aad7-4e151413f693/ENCFF878IIX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity partially characterized antibody ENCFF237RYP bigWig bigWig signal p-value GRCh38 ENCSR412QBS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TARDBP-human DNA 2016-04-22 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF834LZX/, /files/ENCFF592TJP/, /files/ENCFF783FZL/, /files/ENCFF526WYZ/ 2018672897 ENCODE Processing Pipeline a665c6883c86def1880238a15649df3b https://www.encodeproject.org/files/ENCFF237RYP/@@download/ENCFF237RYP.bigWig released s3://encode-public/2020/12/04/fd246d8b-876a-4150-ae7e-540126f83353/ENCFF237RYP.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/fd246d8b-876a-4150-ae7e-540126f83353/ENCFF237RYP.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF600LZY bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR412QBS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TARDBP-human DNA 2016-04-22 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF783FZL/, /files/ENCFF526WYZ/, /files/ENCFF834LZX/, /files/ENCFF592TJP/ 385620 ENCODE Processing Pipeline fad0cccb286166399cf9746de1884bfc https://www.encodeproject.org/files/ENCFF600LZY/@@download/ENCFF600LZY.bed.gz released s3://encode-public/2020/12/04/6e626ea3-a535-4a6c-8617-e896e6119aa1/ENCFF600LZY.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/6e626ea3-a535-4a6c-8617-e896e6119aa1/ENCFF600LZY.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF866POT bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR412QBS TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TARDBP-human DNA 2016-04-22 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF600LZY/ 804406 ENCODE Processing Pipeline e4afb32dd14ce0b4bf927971944273b8 https://www.encodeproject.org/files/ENCFF866POT/@@download/ENCFF866POT.bigBed released s3://encode-public/2020/12/04/d87134da-4f6d-4675-b962-5a68dff1b8b8/ENCFF866POT.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/d87134da-4f6d-4675-b962-5a68dff1b8b8/ENCFF866POT.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released ENCFF796WRU bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR000DZN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF356LFX/, /files/ENCFF876QCV/, /files/ENCFF747TJH/ 711745 ENCODE Processing Pipeline 3f36655eb9a421a542ff031fc7b5e9aa https://www.encodeproject.org/files/ENCFF796WRU/@@download/ENCFF796WRU.bed.gz released s3://encode-public/2020/09/25/7e8d6767-53ef-45db-93e9-dcc111ebd38d/ENCFF796WRU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/09/25/7e8d6767-53ef-45db-93e9-dcc111ebd38d/ENCFF796WRU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth control insufficient read depth ENCFF635MMB bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR000DZN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF796WRU/ 1338264 ENCODE Processing Pipeline 94468990ecb9e2820dbe867b8453f83b https://www.encodeproject.org/files/ENCFF635MMB/@@download/ENCFF635MMB.bigBed released s3://encode-public/2020/09/25/a1b32d36-fc74-4e06-993c-d7074365af60/ENCFF635MMB.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/09/25/a1b32d36-fc74-4e06-993c-d7074365af60/ENCFF635MMB.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth control insufficient read depth ENCFF637RGD bigWig bigWig signal p-value GRCh38 ENCSR000DZN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CTCF-human DNA 2011-10-29 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF658PBP/, /files/ENCFF876QCV/, /files/ENCFF747TJH/ 328551173 ENCODE Processing Pipeline 01acfb02e4d49d65c908e2d47e0a2eca https://www.encodeproject.org/files/ENCFF637RGD/@@download/ENCFF637RGD.bigWig released s3://encode-public/2020/09/25/d208f784-8344-43cd-9262-9caaf12e6f81/ENCFF637RGD.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/09/25/d208f784-8344-43cd-9262-9caaf12e6f81/ENCFF637RGD.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.1 GRCh38 released low read length, mild to moderate bottlenecking, moderate library complexity, low read depth control insufficient read depth ENCFF635LQI bigWig bigWig signal p-value GRCh38 ENCSR828NCB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens GATAD2B-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF849VQM/, /files/ENCFF320ICA/, /files/ENCFF232AKP/, /files/ENCFF377KFK/ 1829633108 ENCODE Processing Pipeline 2f068ae3e6138a91665cf372765b7528 https://www.encodeproject.org/files/ENCFF635LQI/@@download/ENCFF635LQI.bigWig released s3://encode-public/2020/12/01/63af62e3-4a60-44b1-8e05-01dbed346e04/ENCFF635LQI.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/63af62e3-4a60-44b1-8e05-01dbed346e04/ENCFF635LQI.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF781IAU bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR828NCB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens GATAD2B-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF963DVH/ 1251967 ENCODE Processing Pipeline 138f99d4e05c7df272d2ae424a1c85a4 https://www.encodeproject.org/files/ENCFF781IAU/@@download/ENCFF781IAU.bigBed released s3://encode-public/2020/12/01/3bd39e18-b8ab-47e6-83a6-3d5ccf1410c2/ENCFF781IAU.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/3bd39e18-b8ab-47e6-83a6-3d5ccf1410c2/ENCFF781IAU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF963DVH bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR828NCB TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens GATAD2B-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF849VQM/, /files/ENCFF232AKP/, /files/ENCFF356LFX/, /files/ENCFF320ICA/, /files/ENCFF377KFK/ 571514 ENCODE Processing Pipeline 322056d7414b7df9baa7d53a139380f8 https://www.encodeproject.org/files/ENCFF963DVH/@@download/ENCFF963DVH.bed.gz released s3://encode-public/2020/12/01/158ba0b2-cc50-4f42-8e94-728265421b79/ENCFF963DVH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/158ba0b2-cc50-4f42-8e94-728265421b79/ENCFF963DVH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF983OKU bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR412YGM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZSCAN29-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF828NYA/ 261205 ENCODE Processing Pipeline 1dd321694cad9564c35974b19d657318 https://www.encodeproject.org/files/ENCFF983OKU/@@download/ENCFF983OKU.bigBed released s3://encode-public/2020/12/04/b94835d5-bd73-4fc9-a30f-7dbbeebe1af8/ENCFF983OKU.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/b94835d5-bd73-4fc9-a30f-7dbbeebe1af8/ENCFF983OKU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF038SSG bigWig bigWig signal p-value GRCh38 ENCSR412YGM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZSCAN29-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF711JVL/, /files/ENCFF232AKP/, /files/ENCFF724UTV/, /files/ENCFF377KFK/ 1751861465 ENCODE Processing Pipeline 623461fd08d4eb69c1856fe20b6b72d5 https://www.encodeproject.org/files/ENCFF038SSG/@@download/ENCFF038SSG.bigWig released s3://encode-public/2020/12/04/fc6426bc-c1a3-46b0-bd9d-343e687b06e4/ENCFF038SSG.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/fc6426bc-c1a3-46b0-bd9d-343e687b06e4/ENCFF038SSG.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF828NYA bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR412YGM TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZSCAN29-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF724UTV/, /files/ENCFF711JVL/, /files/ENCFF356LFX/, /files/ENCFF377KFK/ 103988 ENCODE Processing Pipeline b1774d2776de5ba9da94b569fac4eea4 https://www.encodeproject.org/files/ENCFF828NYA/@@download/ENCFF828NYA.bed.gz released s3://encode-public/2020/12/04/db85b6a7-8e0b-4ff9-9d72-ddfb8427d8fe/ENCFF828NYA.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/db85b6a7-8e0b-4ff9-9d72-ddfb8427d8fe/ENCFF828NYA.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF033MGN bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR813DCK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMAD1-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF262ESX/, /files/ENCFF526WYZ/, /files/ENCFF955YTJ/, /files/ENCFF356LFX/ 179225 ENCODE Processing Pipeline 94ba88d57587d635bcb888912b7d8069 https://www.encodeproject.org/files/ENCFF033MGN/@@download/ENCFF033MGN.bed.gz released s3://encode-public/2020/12/02/d260b517-acf3-4c89-9e2f-b470a8d03b05/ENCFF033MGN.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/d260b517-acf3-4c89-9e2f-b470a8d03b05/ENCFF033MGN.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, low read depth partially characterized antibody ENCFF682KYZ bigWig bigWig signal p-value GRCh38 ENCSR813DCK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMAD1-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF783FZL/, /files/ENCFF262ESX/, /files/ENCFF526WYZ/, /files/ENCFF955YTJ/ 2006674129 ENCODE Processing Pipeline 5db1529fce4824786c13f63aeae660d5 https://www.encodeproject.org/files/ENCFF682KYZ/@@download/ENCFF682KYZ.bigWig released s3://encode-public/2020/12/02/b6166f84-1583-43d4-9179-06f3e1ee0d67/ENCFF682KYZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/b6166f84-1583-43d4-9179-06f3e1ee0d67/ENCFF682KYZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, low read depth partially characterized antibody ENCFF130NRZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR813DCK TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMAD1-human DNA 2018-01-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF033MGN/ 423968 ENCODE Processing Pipeline 7d2a2b76b12729be92f2012d3cc5b9f5 https://www.encodeproject.org/files/ENCFF130NRZ/@@download/ENCFF130NRZ.bigBed released s3://encode-public/2020/12/02/50f5b383-93ec-4a98-b65d-4193e60a930c/ENCFF130NRZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/50f5b383-93ec-4a98-b65d-4193e60a930c/ENCFF130NRZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, low read depth partially characterized antibody ENCFF042VGY bigWig bigWig signal p-value GRCh38 ENCSR205SKQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YBX1-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF410MRB/, /files/ENCFF526WYZ/, /files/ENCFF786DTU/, /files/ENCFF783FZL/ 1932184661 ENCODE Processing Pipeline 1b9d1b51b48fe06cd9cee2efed99edce https://www.encodeproject.org/files/ENCFF042VGY/@@download/ENCFF042VGY.bigWig released s3://encode-public/2020/11/28/815fbbec-9a17-4daf-9671-a39462a1787a/ENCFF042VGY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/28/815fbbec-9a17-4daf-9671-a39462a1787a/ENCFF042VGY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption ENCFF488IGF bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR205SKQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YBX1-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF526WYZ/, /files/ENCFF786DTU/, /files/ENCFF356LFX/, /files/ENCFF410MRB/, /files/ENCFF783FZL/ 25728 ENCODE Processing Pipeline 6053d790c8defdc6abe4b2d18ba70b7e https://www.encodeproject.org/files/ENCFF488IGF/@@download/ENCFF488IGF.bed.gz released s3://encode-public/2020/11/28/ea2292e9-1f25-4098-9670-8d2c0091084e/ENCFF488IGF.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/28/ea2292e9-1f25-4098-9670-8d2c0091084e/ENCFF488IGF.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption ENCFF641EEK bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR205SKQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens YBX1-human DNA 2016-08-24 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF488IGF/ 97718 ENCODE Processing Pipeline 7a288efe1185645db30ef9aba4ce2219 https://www.encodeproject.org/files/ENCFF641EEK/@@download/ENCFF641EEK.bigBed released s3://encode-public/2020/11/28/ded49fac-db66-48ec-9efc-1c1cc71c6d0d/ENCFF641EEK.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/28/ded49fac-db66-48ec-9efc-1c1cc71c6d0d/ENCFF641EEK.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released antibody characterized with exemption ENCFF119FKZ bigWig bigWig signal p-value GRCh38 ENCSR732PJX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NKRF-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF756TJY/, /files/ENCFF322HVR/, /files/ENCFF232AKP/, /files/ENCFF377KFK/ 2066993557 ENCODE Processing Pipeline e37519e58520538bb87a99d9732d9866 https://www.encodeproject.org/files/ENCFF119FKZ/@@download/ENCFF119FKZ.bigWig released s3://encode-public/2020/12/04/075f3503-8b80-4735-a700-daea68896cea/ENCFF119FKZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/075f3503-8b80-4735-a700-daea68896cea/ENCFF119FKZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF862GDZ bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR732PJX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NKRF-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF756TJY/, /files/ENCFF356LFX/, /files/ENCFF322HVR/, /files/ENCFF232AKP/, /files/ENCFF377KFK/ 393800 ENCODE Processing Pipeline 3d80cd6b60dbb844575834f1550fdb3c https://www.encodeproject.org/files/ENCFF862GDZ/@@download/ENCFF862GDZ.bed.gz released s3://encode-public/2020/12/04/f80259fc-85a6-4360-9955-64d8015f8b95/ENCFF862GDZ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/f80259fc-85a6-4360-9955-64d8015f8b95/ENCFF862GDZ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF392NLB bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR732PJX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NKRF-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF862GDZ/ 936780 ENCODE Processing Pipeline 2a70e08006955e74a1c0d8dbfbbf358d https://www.encodeproject.org/files/ENCFF392NLB/@@download/ENCFF392NLB.bigBed released s3://encode-public/2020/12/04/3f4e0f47-da52-46cd-b68e-02468b184e7b/ENCFF392NLB.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/3f4e0f47-da52-46cd-b68e-02468b184e7b/ENCFF392NLB.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF734BGL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR859FDL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF687-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF941QOM/, /files/ENCFF377KFK/, /files/ENCFF356LFX/, /files/ENCFF232AKP/, /files/ENCFF682VYT/ 583917 ENCODE Processing Pipeline d0530174002284f3831ebbbd509873c1 https://www.encodeproject.org/files/ENCFF734BGL/@@download/ENCFF734BGL.bed.gz released s3://encode-public/2020/12/03/90cb10ad-61b5-405b-b178-136862ad6157/ENCFF734BGL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/90cb10ad-61b5-405b-b178-136862ad6157/ENCFF734BGL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF233SGE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR859FDL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF687-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF734BGL/ 1255343 ENCODE Processing Pipeline ce96da97d9ae193136c43d135b266ed0 https://www.encodeproject.org/files/ENCFF233SGE/@@download/ENCFF233SGE.bigBed released s3://encode-public/2020/12/03/fcc36468-7575-4eaf-ba92-fc0021cb6992/ENCFF233SGE.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/fcc36468-7575-4eaf-ba92-fc0021cb6992/ENCFF233SGE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF789XNH bigWig bigWig signal p-value GRCh38 ENCSR859FDL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF687-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF941QOM/, /files/ENCFF377KFK/, /files/ENCFF232AKP/, /files/ENCFF682VYT/ 2290598392 ENCODE Processing Pipeline 8bc8da905ec2303c415af57fc4a41d1c https://www.encodeproject.org/files/ENCFF789XNH/@@download/ENCFF789XNH.bigWig released s3://encode-public/2020/12/03/3913a7ca-7ac0-48f3-949b-735c51e6b211/ENCFF789XNH.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/3913a7ca-7ac0-48f3-949b-735c51e6b211/ENCFF789XNH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF859VLX bigWig bigWig signal p-value GRCh38 ENCSR636MKU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BACH1-human DNA 2017-01-31 ENCODE 450-650 3, 4 3_1, 4_1 /files/ENCFF377KFK/, /files/ENCFF232AKP/, /files/ENCFF965UYJ/, /files/ENCFF054MKW/ 1841204213 ENCODE Processing Pipeline 37757eeb64660072db117ce16377a8e1 https://www.encodeproject.org/files/ENCFF859VLX/@@download/ENCFF859VLX.bigWig released s3://encode-public/2020/12/03/1333f22f-96fd-4c6c-952e-a20edf09a583/ENCFF859VLX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/1333f22f-96fd-4c6c-952e-a20edf09a583/ENCFF859VLX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF631RZH bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR636MKU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BACH1-human DNA 2017-01-31 ENCODE 450-650 3, 4 3_1, 4_1 /files/ENCFF356LFX/, /files/ENCFF965UYJ/, /files/ENCFF377KFK/, /files/ENCFF232AKP/, /files/ENCFF054MKW/ 417038 ENCODE Processing Pipeline a3bdd144dfebe5bcbebab56fdafc67d8 https://www.encodeproject.org/files/ENCFF631RZH/@@download/ENCFF631RZH.bed.gz released s3://encode-public/2020/12/03/d55e0fa7-8562-499b-8cdf-59624a6fc0b5/ENCFF631RZH.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/d55e0fa7-8562-499b-8cdf-59624a6fc0b5/ENCFF631RZH.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF576UEQ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR636MKU TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BACH1-human DNA 2017-01-31 ENCODE 450-650 3, 4 3_1, 4_1 /files/ENCFF631RZH/ 862148 ENCODE Processing Pipeline 0d079afcd3341b561ab959fce446e5d1 https://www.encodeproject.org/files/ENCFF576UEQ/@@download/ENCFF576UEQ.bigBed released s3://encode-public/2020/12/03/ce6016cd-871e-4507-9077-ad8d031fdfcb/ENCFF576UEQ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/ce6016cd-871e-4507-9077-ad8d031fdfcb/ENCFF576UEQ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF673GWX bigWig bigWig signal p-value GRCh38 ENCSR987MTA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BHLHE40-human DNA 2017-01-31 ENCODE 450-650 4, 5 4_1, 5_1 /files/ENCFF827XJM/, /files/ENCFF314PKF/, /files/ENCFF377KFK/, /files/ENCFF232AKP/ 1720475457 ENCODE Processing Pipeline 2533fa3539729f7cdac84b4473e2211c https://www.encodeproject.org/files/ENCFF673GWX/@@download/ENCFF673GWX.bigWig released s3://encode-public/2020/11/30/a091e1e6-d3bb-465b-839d-42b7f771dd2d/ENCFF673GWX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/30/a091e1e6-d3bb-465b-839d-42b7f771dd2d/ENCFF673GWX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF521IZR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR987MTA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BHLHE40-human DNA 2017-01-31 ENCODE 450-650 4, 5 4_1, 5_1 /files/ENCFF445XYV/ 1707491 ENCODE Processing Pipeline 4836b5c1d6116b4e7b80902da039baf6 https://www.encodeproject.org/files/ENCFF521IZR/@@download/ENCFF521IZR.bigBed released s3://encode-public/2020/11/30/fc637e8d-7d87-4efa-a334-ca1cfaaf2f86/ENCFF521IZR.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/30/fc637e8d-7d87-4efa-a334-ca1cfaaf2f86/ENCFF521IZR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF445XYV bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR987MTA TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BHLHE40-human DNA 2017-01-31 ENCODE 450-650 4, 5 4_1, 5_1 /files/ENCFF356LFX/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF827XJM/, /files/ENCFF314PKF/ 893880 ENCODE Processing Pipeline 3960306a37a9fb54d9dd99c66ed09df0 https://www.encodeproject.org/files/ENCFF445XYV/@@download/ENCFF445XYV.bed.gz released s3://encode-public/2020/11/30/3e43a3f2-c428-4cd8-b68b-b32b22c66e9a/ENCFF445XYV.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/30/3e43a3f2-c428-4cd8-b68b-b32b22c66e9a/ENCFF445XYV.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, low read depth ENCFF740CNX bigWig bigWig signal p-value GRCh38 ENCSR075FNZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF622-human DNA 2017-11-13 ENCODE 450-650 1, 3 1_1, 3_1 /files/ENCFF783FZL/, /files/ENCFF349EDR/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF526WYZ/, /files/ENCFF419RWP/ 2532649249 ENCODE Processing Pipeline 5555d758ea8ba6c06bdb06ddcbf8b1b9 https://www.encodeproject.org/files/ENCFF740CNX/@@download/ENCFF740CNX.bigWig released s3://encode-public/2020/12/09/977d7af3-ad0f-4a47-b53f-9486d6c71f40/ENCFF740CNX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/09/977d7af3-ad0f-4a47-b53f-9486d6c71f40/ENCFF740CNX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms ENCFF463AFX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR075FNZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF622-human DNA 2017-11-13 ENCODE 450-650 1, 3 1_1, 3_1 /files/ENCFF359PUY/ 58461 ENCODE Processing Pipeline f584e3edceb7d9203b82a951c853408b https://www.encodeproject.org/files/ENCFF463AFX/@@download/ENCFF463AFX.bigBed released s3://encode-public/2020/12/09/d9576c36-fa5c-473f-90d3-e6e6540a0893/ENCFF463AFX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/09/d9576c36-fa5c-473f-90d3-e6e6540a0893/ENCFF463AFX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms ENCFF359PUY bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR075FNZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF622-human DNA 2017-11-13 ENCODE 450-650 1, 3 1_1, 3_1 /files/ENCFF783FZL/, /files/ENCFF349EDR/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF356LFX/, /files/ENCFF526WYZ/, /files/ENCFF419RWP/ 3834 ENCODE Processing Pipeline 797843fcbbcc05f756544e03cb8312e5 https://www.encodeproject.org/files/ENCFF359PUY/@@download/ENCFF359PUY.bed.gz released s3://encode-public/2020/12/09/4e871179-4c2a-4dd1-ba50-9d623ced2916/ENCFF359PUY.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/09/4e871179-4c2a-4dd1-ba50-9d623ced2916/ENCFF359PUY.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, inconsistent platforms ENCFF653KLN bigWig bigWig signal p-value GRCh38 ENCSR841NDX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELF1-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF041QIN/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF290PIQ/ 2109825981 ENCODE Processing Pipeline 48510ba911a3d7a98cd097bcd5d594aa https://www.encodeproject.org/files/ENCFF653KLN/@@download/ENCFF653KLN.bigWig released s3://encode-public/2020/12/01/ecdaa79c-c1aa-4bd9-b0dd-16f9231db793/ENCFF653KLN.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/01/ecdaa79c-c1aa-4bd9-b0dd-16f9231db793/ENCFF653KLN.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF479HJF bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR841NDX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELF1-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF041QIN/, /files/ENCFF232AKP/, /files/ENCFF356LFX/, /files/ENCFF377KFK/, /files/ENCFF290PIQ/ 616239 ENCODE Processing Pipeline f169d9998ed1995c7bfcead7633ada75 https://www.encodeproject.org/files/ENCFF479HJF/@@download/ENCFF479HJF.bed.gz released s3://encode-public/2020/12/01/d7c5e02c-69ad-490e-8d89-84194d81d0ed/ENCFF479HJF.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/01/d7c5e02c-69ad-490e-8d89-84194d81d0ed/ENCFF479HJF.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF692SMY bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR841NDX TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ELF1-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF479HJF/ 1235653 ENCODE Processing Pipeline 34ecb0c74619670eb484b9c18ef7c4e0 https://www.encodeproject.org/files/ENCFF692SMY/@@download/ENCFF692SMY.bigBed released s3://encode-public/2020/12/01/8a9285c4-d7c6-466d-b407-9917d3e6cb87/ENCFF692SMY.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/01/8a9285c4-d7c6-466d-b407-9917d3e6cb87/ENCFF692SMY.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF522DCZ bigWig bigWig signal p-value GRCh38 ENCSR072PWP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF24-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF928WUT/, /files/ENCFF659BAL/, /files/ENCFF232AKP/, /files/ENCFF377KFK/ 2083025883 ENCODE Processing Pipeline 83456f85a0ba2f4e1efdf1e72e63999d https://www.encodeproject.org/files/ENCFF522DCZ/@@download/ENCFF522DCZ.bigWig released s3://encode-public/2020/11/29/a414e42d-9e4e-4c73-94fc-7bb8ffa8fcc8/ENCFF522DCZ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/11/29/a414e42d-9e4e-4c73-94fc-7bb8ffa8fcc8/ENCFF522DCZ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF664TYB bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR072PWP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF24-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF356LFX/, /files/ENCFF928WUT/, /files/ENCFF659BAL/ 310660 ENCODE Processing Pipeline c0f09d1561061e5e6791bcd06de06892 https://www.encodeproject.org/files/ENCFF664TYB/@@download/ENCFF664TYB.bed.gz released s3://encode-public/2020/11/29/5846d915-f51b-4b07-b515-b7ea93231949/ENCFF664TYB.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/11/29/5846d915-f51b-4b07-b515-b7ea93231949/ENCFF664TYB.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF688STO bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR072PWP TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF24-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF664TYB/ 583922 ENCODE Processing Pipeline 6f3ac0b3ec547fd25cc64ccbac432bcd https://www.encodeproject.org/files/ENCFF688STO/@@download/ENCFF688STO.bigBed released s3://encode-public/2020/11/29/5da6f435-b003-4607-92d0-4f65e37d15a8/ENCFF688STO.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/11/29/5da6f435-b003-4607-92d0-4f65e37d15a8/ENCFF688STO.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF550FDV bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR706YUH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMARCA5-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF070IQU/, /files/ENCFF377KFK/, /files/ENCFF998MCZ/, /files/ENCFF356LFX/ 511634 ENCODE Processing Pipeline 0824bb9814884df9aa0528923cc7d8f6 https://www.encodeproject.org/files/ENCFF550FDV/@@download/ENCFF550FDV.bed.gz released s3://encode-public/2020/12/02/46a9d65c-b684-45cb-8796-898f98e52428/ENCFF550FDV.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/46a9d65c-b684-45cb-8796-898f98e52428/ENCFF550FDV.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF349QKS bigWig bigWig signal p-value GRCh38 ENCSR706YUH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMARCA5-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF070IQU/, /files/ENCFF998MCZ/, /files/ENCFF377KFK/, /files/ENCFF232AKP/ 2009977137 ENCODE Processing Pipeline 51e591b7345097fbd5b7d7c958ab9253 https://www.encodeproject.org/files/ENCFF349QKS/@@download/ENCFF349QKS.bigWig released s3://encode-public/2020/12/02/05c9a6d0-079e-4908-867f-99511c3dfc0e/ENCFF349QKS.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/05c9a6d0-079e-4908-867f-99511c3dfc0e/ENCFF349QKS.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF327LDR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR706YUH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens SMARCA5-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF550FDV/ 1170142 ENCODE Processing Pipeline a5e0e01de141c289c016a2c62751aed7 https://www.encodeproject.org/files/ENCFF327LDR/@@download/ENCFF327LDR.bigBed released s3://encode-public/2020/12/02/f3a73ccd-1cdb-459d-9723-ad0a0de7547a/ENCFF327LDR.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/f3a73ccd-1cdb-459d-9723-ad0a0de7547a/ENCFF327LDR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF012ZPU bigWig bigWig signal p-value GRCh38 ENCSR441VHN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF247FMB/, /files/ENCFF487CFV/ 2076339900 ENCODE Processing Pipeline d2f2af4a351e0721c7fc4af4d74d4e6f https://www.encodeproject.org/files/ENCFF012ZPU/@@download/ENCFF012ZPU.bigWig released s3://encode-public/2020/12/04/f931b633-f106-458b-9d3f-88065ae839fa/ENCFF012ZPU.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/f931b633-f106-458b-9d3f-88065ae839fa/ENCFF012ZPU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF824TGK bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR441VHN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF448JWW/ 2542341 ENCODE Processing Pipeline 92ffcb15e5537cb37eaf2acb203a92c8 https://www.encodeproject.org/files/ENCFF824TGK/@@download/ENCFF824TGK.bigBed released s3://encode-public/2020/12/04/ba57becf-1d3e-4f64-afb2-aeb6f2fa8940/ENCFF824TGK.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/ba57becf-1d3e-4f64-afb2-aeb6f2fa8940/ENCFF824TGK.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF448JWW bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR441VHN TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens IKZF1-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF356LFX/, /files/ENCFF487CFV/, /files/ENCFF377KFK/, /files/ENCFF247FMB/ 1321131 ENCODE Processing Pipeline 5b0cd5e95705235e764884a58adc74c0 https://www.encodeproject.org/files/ENCFF448JWW/@@download/ENCFF448JWW.bed.gz released s3://encode-public/2020/12/04/51dcf99c-6b92-43ad-91bb-5a50466dc144/ENCFF448JWW.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/51dcf99c-6b92-43ad-91bb-5a50466dc144/ENCFF448JWW.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF725MJO bigWig bigWig signal p-value GRCh38 ENCSR057DTZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'dbxrefs': ['FactorBook:ZBTB11'], 'aliases': [], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/27107/'], '@type': ['Target', 'Item'], 'label': 'ZBTB11', 'title': 'ZBTB11 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'e6b7c1f8-62d9-48fb-a633-b01a6c77ac69', 'schema_version': '14', 'name': 'ZBTB11-human', '@id': '/targets/ZBTB11-human/', 'status': 'released'} ZBTB11-human DNA formaldehyde 2022-06-10 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF044JTQ/, /files/ENCFF620DRI/, /files/ENCFF897HIU/ 1760102092 ENCODE Processing Pipeline d80293ab60a7790509dba710431599cd https://www.encodeproject.org/files/ENCFF725MJO/@@download/ENCFF725MJO.bigWig released s3://encode-public/2020/07/09/66414eae-66ef-4d10-b9a7-9717ccf7bd93/ENCFF725MJO.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/07/09/66414eae-66ef-4d10-b9a7-9717ccf7bd93/ENCFF725MJO.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.0 GRCh38 released mild to moderate bottlenecking, missing genetic modification characterization ENCFF083GTV bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR057DTZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'dbxrefs': ['FactorBook:ZBTB11'], 'aliases': [], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/27107/'], '@type': ['Target', 'Item'], 'label': 'ZBTB11', 'title': 'ZBTB11 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'e6b7c1f8-62d9-48fb-a633-b01a6c77ac69', 'schema_version': '14', 'name': 'ZBTB11-human', '@id': '/targets/ZBTB11-human/', 'status': 'released'} ZBTB11-human DNA formaldehyde 2022-06-10 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF044JTQ/, /files/ENCFF356LFX/, /files/ENCFF620DRI/, /files/ENCFF897HIU/ 53626 ENCODE Processing Pipeline 169be69044b9490756d4da450e52a8d0 https://www.encodeproject.org/files/ENCFF083GTV/@@download/ENCFF083GTV.bed.gz released s3://encode-public/2020/07/09/2cf2e21d-0da6-474a-96d6-85e47972f890/ENCFF083GTV.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/07/09/2cf2e21d-0da6-474a-96d6-85e47972f890/ENCFF083GTV.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.0 GRCh38 released mild to moderate bottlenecking, missing genetic modification characterization ENCFF431EUZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR057DTZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens CRISPR insertion {'dbxrefs': ['FactorBook:ZBTB11'], 'aliases': [], 'organism': {'schema_version': '6', '@type': ['Organism', 'Item'], 'name': 'human', 'taxon_id': '9606', 'scientific_name': 'Homo sapiens', '@id': '/organisms/human/', 'uuid': '7745b647-ff15-4ff3-9ced-b897d4e2983c', 'status': 'released'}, 'genes': ['/genes/27107/'], '@type': ['Target', 'Item'], 'label': 'ZBTB11', 'title': 'ZBTB11 (Homo sapiens)', 'investigated_as': ['transcription factor'], 'uuid': 'e6b7c1f8-62d9-48fb-a633-b01a6c77ac69', 'schema_version': '14', 'name': 'ZBTB11-human', '@id': '/targets/ZBTB11-human/', 'status': 'released'} ZBTB11-human DNA formaldehyde 2022-06-10 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF083GTV/ 147010 ENCODE Processing Pipeline f38b2f242b5f39b3c3eed369666a52b4 https://www.encodeproject.org/files/ENCFF431EUZ/@@download/ENCFF431EUZ.bigBed released s3://encode-public/2020/07/09/24d8fa5e-5c39-479d-948d-a15ed5c756cd/ENCFF431EUZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/07/09/24d8fa5e-5c39-479d-948d-a15ed5c756cd/ENCFF431EUZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.5.0 GRCh38 released mild to moderate bottlenecking, missing genetic modification characterization ENCFF322DRU bigWig bigWig signal p-value GRCh38 ENCSR000BGD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF002PKP/, /files/ENCFF886CYK/, /files/ENCFF768KPY/, /files/ENCFF501USI/ 713926544 ENCODE Processing Pipeline 6aed031d98405bae33818a16c268e224 https://www.encodeproject.org/files/ENCFF322DRU/@@download/ENCFF322DRU.bigWig released s3://encode-public/2020/12/26/82cdd225-ccfe-448f-b4ef-d2e3364f42ba/ENCFF322DRU.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/82cdd225-ccfe-448f-b4ef-d2e3364f42ba/ENCFF322DRU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF521FXC bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF535TAL/ 1942769 ENCODE Processing Pipeline b6df7a98bab026a1765d110cf21a9c1f https://www.encodeproject.org/files/ENCFF521FXC/@@download/ENCFF521FXC.bigBed released s3://encode-public/2020/12/26/cc65a555-70d6-4772-bf50-5d395048f8f3/ENCFF521FXC.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/cc65a555-70d6-4772-bf50-5d395048f8f3/ENCFF521FXC.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF535TAL bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BGD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2A-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF501USI/, /files/ENCFF002PKP/, /files/ENCFF886CYK/, /files/ENCFF768KPY/ 855704 ENCODE Processing Pipeline 765be426799cb183e703aa6d6eb3098c https://www.encodeproject.org/files/ENCFF535TAL/@@download/ENCFF535TAL.bed.gz released s3://encode-public/2020/12/26/aad60488-1fdc-4708-be3e-2b96798e7a7c/ENCFF535TAL.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/aad60488-1fdc-4708-be3e-2b96798e7a7c/ENCFF535TAL.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, low read depth ENCFF681AJV bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR509FWH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens DPF2-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF003ZLG/ 1747799 ENCODE Processing Pipeline e115a50555c57fbc0567490b630e5646 https://www.encodeproject.org/files/ENCFF681AJV/@@download/ENCFF681AJV.bigBed released s3://encode-public/2020/12/04/4ea6de9b-ce40-41e3-be3f-c7b92a7d6f82/ENCFF681AJV.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/4ea6de9b-ce40-41e3-be3f-c7b92a7d6f82/ENCFF681AJV.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF300KFL bigWig bigWig signal p-value GRCh38 ENCSR509FWH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens DPF2-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF475ECM/, /files/ENCFF546GNE/, /files/ENCFF232AKP/ 1750241206 ENCODE Processing Pipeline aa840bbb90aae867da78332a23a45bc3 https://www.encodeproject.org/files/ENCFF300KFL/@@download/ENCFF300KFL.bigWig released s3://encode-public/2020/12/04/435a66db-a62d-4075-a269-01d6e9f838e7/ENCFF300KFL.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/435a66db-a62d-4075-a269-01d6e9f838e7/ENCFF300KFL.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF003ZLG bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR509FWH TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens DPF2-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF475ECM/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF546GNE/, /files/ENCFF356LFX/ 812289 ENCODE Processing Pipeline 592f8e412f773f490de48e776d71f787 https://www.encodeproject.org/files/ENCFF003ZLG/@@download/ENCFF003ZLG.bed.gz released s3://encode-public/2020/12/04/fc3e68a3-00ea-44cf-9908-8ba7757acb36/ENCFF003ZLG.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/fc3e68a3-00ea-44cf-9908-8ba7757acb36/ENCFF003ZLG.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF888DIY bigWig bigWig signal p-value GRCh38 ENCSR785OKZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RB1-human DNA formaldehyde 2017-06-07 ENCODE 450-650 3, 4 3_1, 4_1 /files/ENCFF432IFW/, /files/ENCFF006SZZ/, /files/ENCFF526WYZ/, /files/ENCFF783FZL/ 1802146129 ENCODE Processing Pipeline b970ec3aee8f2f33bbaa1ca7785535d2 https://www.encodeproject.org/files/ENCFF888DIY/@@download/ENCFF888DIY.bigWig released s3://encode-public/2020/12/02/a5237835-6a79-4316-a25b-e6b3819f130b/ENCFF888DIY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/a5237835-6a79-4316-a25b-e6b3819f130b/ENCFF888DIY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF844GNV bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR785OKZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RB1-human DNA formaldehyde 2017-06-07 ENCODE 450-650 3, 4 3_1, 4_1 /files/ENCFF432IFW/, /files/ENCFF526WYZ/, /files/ENCFF006SZZ/, /files/ENCFF783FZL/, /files/ENCFF356LFX/ 305914 ENCODE Processing Pipeline a6ceb3947b744eb31a0770fc665010be https://www.encodeproject.org/files/ENCFF844GNV/@@download/ENCFF844GNV.bed.gz released s3://encode-public/2020/12/02/78683aba-0df3-46d1-881d-49add12e7ed8/ENCFF844GNV.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/78683aba-0df3-46d1-881d-49add12e7ed8/ENCFF844GNV.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF495RZI bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR785OKZ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens RB1-human DNA formaldehyde 2017-06-07 ENCODE 450-650 3, 4 3_1, 4_1 /files/ENCFF844GNV/ 654386 ENCODE Processing Pipeline 9b199490b65d87a0544c9fef5a50d53e https://www.encodeproject.org/files/ENCFF495RZI/@@download/ENCFF495RZI.bigBed released s3://encode-public/2020/12/02/ed4cea89-f850-4d5e-b123-4c93319f9618/ENCFF495RZI.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/ed4cea89-f850-4d5e-b123-4c93319f9618/ENCFF495RZI.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking ENCFF743ECS bigWig bigWig signal p-value GRCh38 ENCSR342THD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCLAF1-human DNA 2017-04-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF232AKP/, /files/ENCFF621IXQ/, /files/ENCFF985QHV/ 2053020894 ENCODE Processing Pipeline b48bf08c517d49afb3db6d488786fee8 https://www.encodeproject.org/files/ENCFF743ECS/@@download/ENCFF743ECS.bigWig released s3://encode-public/2021/02/04/00c296f9-e0f1-44d5-80ed-d08596788943/ENCFF743ECS.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/00c296f9-e0f1-44d5-80ed-d08596788943/ENCFF743ECS.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF055QPX bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR342THD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCLAF1-human DNA 2017-04-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF985QHV/, /files/ENCFF621IXQ/, /files/ENCFF356LFX/, /files/ENCFF232AKP/ 36288 ENCODE Processing Pipeline 417faf596df362c2d9d8c5469158efd5 https://www.encodeproject.org/files/ENCFF055QPX/@@download/ENCFF055QPX.bed.gz released s3://encode-public/2021/02/04/158faf3e-3c8a-4331-a13f-3805e7f2f752/ENCFF055QPX.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/158faf3e-3c8a-4331-a13f-3805e7f2f752/ENCFF055QPX.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF655JCD bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR342THD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens BCLAF1-human DNA 2017-04-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF055QPX/ 118403 ENCODE Processing Pipeline 14a5f383d0bce04c94d466900dfe36b3 https://www.encodeproject.org/files/ENCFF655JCD/@@download/ENCFF655JCD.bigBed released s3://encode-public/2021/02/04/7d4b1d89-2480-4e31-8c07-3d402994979e/ENCFF655JCD.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/7d4b1d89-2480-4e31-8c07-3d402994979e/ENCFF655JCD.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF626EEU bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR784VIQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2C1-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF901UAR/, /files/ENCFF232AKP/, /files/ENCFF658ETS/, /files/ENCFF356LFX/ 193321 ENCODE Processing Pipeline 17303270a69285b301a2d294842744b7 https://www.encodeproject.org/files/ENCFF626EEU/@@download/ENCFF626EEU.bed.gz released s3://encode-public/2020/12/03/76446fbc-f619-4e09-8ebe-c398e05fa1cb/ENCFF626EEU.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/76446fbc-f619-4e09-8ebe-c398e05fa1cb/ENCFF626EEU.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF986VHR bigWig bigWig signal p-value GRCh38 ENCSR784VIQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2C1-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF901UAR/, /files/ENCFF658ETS/, /files/ENCFF232AKP/, /files/ENCFF377KFK/ 1890349693 ENCODE Processing Pipeline 09f3fbfff7dbd30fc8335101fca3f381 https://www.encodeproject.org/files/ENCFF986VHR/@@download/ENCFF986VHR.bigWig released s3://encode-public/2020/12/03/1e60a959-9a8d-4199-9607-2fbf17c3a44d/ENCFF986VHR.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/1e60a959-9a8d-4199-9607-2fbf17c3a44d/ENCFF986VHR.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF101ELO bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR784VIQ TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2C1-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF626EEU/ 416895 ENCODE Processing Pipeline 2e784060b60da5aa19426f727157a562 https://www.encodeproject.org/files/ENCFF101ELO/@@download/ENCFF101ELO.bigBed released s3://encode-public/2020/12/03/fa4b0959-20df-4c39-b0fb-8894f3c3c703/ENCFF101ELO.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/fa4b0959-20df-4c39-b0fb-8894f3c3c703/ENCFF101ELO.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption, moderate library complexity ENCFF006ARY bigWig bigWig signal p-value GRCh38 ENCSR514VYD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2F1-human DNA 2017-04-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF677LIC/, /files/ENCFF534AXH/, /files/ENCFF232AKP/ 1793109442 ENCODE Processing Pipeline 680e80c037facbdc84558de0e17152e6 https://www.encodeproject.org/files/ENCFF006ARY/@@download/ENCFF006ARY.bigWig released s3://encode-public/2020/12/04/8ba1a2eb-927d-4564-bb1d-093a2a9c21c2/ENCFF006ARY.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/04/8ba1a2eb-927d-4564-bb1d-093a2a9c21c2/ENCFF006ARY.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF118UKC bed narrowPeak bed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR514VYD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2F1-human DNA 2017-04-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF356LFX/, /files/ENCFF232AKP/, /files/ENCFF677LIC/, /files/ENCFF534AXH/ 751485 ENCODE Processing Pipeline c49702fa31f06f27bdcdbf806a514f7d https://www.encodeproject.org/files/ENCFF118UKC/@@download/ENCFF118UKC.bed.gz released s3://encode-public/2020/12/04/e790c15b-1b6a-4009-9696-37ead98fc0a3/ENCFF118UKC.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/04/e790c15b-1b6a-4009-9696-37ead98fc0a3/ENCFF118UKC.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF273VKX bigBed narrowPeak bigBed narrowPeak conservative IDR thresholded peaks GRCh38 ENCSR514VYD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NR2F1-human DNA 2017-04-14 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF118UKC/ 1706997 ENCODE Processing Pipeline 5699bdcb6bc5b2da75a79152ef5b9cc5 https://www.encodeproject.org/files/ENCFF273VKX/@@download/ENCFF273VKX.bigBed released s3://encode-public/2020/12/04/673a6f4d-bd56-411f-abf0-e892518a6b53/ENCFF273VKX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/04/673a6f4d-bd56-411f-abf0-e892518a6b53/ENCFF273VKX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF510ZBJ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR173ZVL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF592-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF831HFY/, /files/ENCFF110PUQ/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF356LFX/ 166418 ENCODE Processing Pipeline 959c6fcbb13ccf10bdeaa2bf73e768c1 https://www.encodeproject.org/files/ENCFF510ZBJ/@@download/ENCFF510ZBJ.bed.gz released s3://encode-public/2021/02/04/0943bb96-bf6f-47ce-89f2-4dfcf4686632/ENCFF510ZBJ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2021/02/04/0943bb96-bf6f-47ce-89f2-4dfcf4686632/ENCFF510ZBJ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF513RQU bigWig bigWig signal p-value GRCh38 ENCSR173ZVL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF592-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF110PUQ/, /files/ENCFF377KFK/, /files/ENCFF831HFY/ 1996560133 ENCODE Processing Pipeline 481a68f978666a62c3d2ee75db236bfe https://www.encodeproject.org/files/ENCFF513RQU/@@download/ENCFF513RQU.bigWig released s3://encode-public/2021/02/04/ae9d07c5-771c-4f33-9f01-146b365a7a94/ENCFF513RQU.bigWig https://datasetencode.blob.core.windows.net/dataset/2021/02/04/ae9d07c5-771c-4f33-9f01-146b365a7a94/ENCFF513RQU.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF818ABS bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR173ZVL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF592-human DNA 2017-06-26 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF510ZBJ/ 346756 ENCODE Processing Pipeline c7c98118df54ba1be7f108346987d55d https://www.encodeproject.org/files/ENCFF818ABS/@@download/ENCFF818ABS.bigBed released s3://encode-public/2021/02/04/e5852aff-0e47-4d5c-9f80-039182e5be46/ENCFF818ABS.bigBed https://datasetencode.blob.core.windows.net/dataset/2021/02/04/e5852aff-0e47-4d5c-9f80-039182e5be46/ENCFF818ABS.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity ENCFF203JRX bigWig bigWig signal p-value GRCh38 ENCSR725VFL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF12-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF781YRX/, /files/ENCFF275DGB/, /files/ENCFF377KFK/, /files/ENCFF232AKP/ 1635439393 ENCODE Processing Pipeline 1a6878fd2f8e5c185378e46536872112 https://www.encodeproject.org/files/ENCFF203JRX/@@download/ENCFF203JRX.bigWig released s3://encode-public/2020/12/02/0728a39a-94a2-437a-81c3-7c6c8f68f747/ENCFF203JRX.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/0728a39a-94a2-437a-81c3-7c6c8f68f747/ENCFF203JRX.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption ENCFF433DMU bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR725VFL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF12-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF154RAJ/ 506068 ENCODE Processing Pipeline 3489994f0085b95483a8a851b15068f0 https://www.encodeproject.org/files/ENCFF433DMU/@@download/ENCFF433DMU.bigBed released s3://encode-public/2020/12/02/b3630ae5-c96d-4710-b2cd-4a573c1bd072/ENCFF433DMU.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/b3630ae5-c96d-4710-b2cd-4a573c1bd072/ENCFF433DMU.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption ENCFF154RAJ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR725VFL TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens TCF12-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF232AKP/, /files/ENCFF781YRX/, /files/ENCFF275DGB/, /files/ENCFF356LFX/ 257836 ENCODE Processing Pipeline c46c6f68563dc5b4200fa4a65c3178bb https://www.encodeproject.org/files/ENCFF154RAJ/@@download/ENCFF154RAJ.bed.gz released s3://encode-public/2020/12/02/e16df952-ccf1-4711-b832-c3e4ba41a40d/ENCFF154RAJ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/e16df952-ccf1-4711-b832-c3e4ba41a40d/ENCFF154RAJ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, antibody characterized with exemption ENCFF956YSH bigWig bigWig signal p-value GRCh38 ENCSR657PEW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens LARP7-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF272NSK/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF367CQI/ 1853290979 ENCODE Processing Pipeline af6bc8f444065a25f82a9fe17f84e4c2 https://www.encodeproject.org/files/ENCFF956YSH/@@download/ENCFF956YSH.bigWig released s3://encode-public/2020/12/03/8d60313c-1fd5-4b93-8cfd-2fd7e88c23ff/ENCFF956YSH.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/8d60313c-1fd5-4b93-8cfd-2fd7e88c23ff/ENCFF956YSH.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF927IGC bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR657PEW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens LARP7-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF367CQI/, /files/ENCFF377KFK/, /files/ENCFF272NSK/, /files/ENCFF232AKP/, /files/ENCFF356LFX/ 381056 ENCODE Processing Pipeline 9777a97e27b0cc89d0b38e8e9c7359e7 https://www.encodeproject.org/files/ENCFF927IGC/@@download/ENCFF927IGC.bed.gz released s3://encode-public/2020/12/03/677db548-8600-4120-8b78-262c1283947b/ENCFF927IGC.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/677db548-8600-4120-8b78-262c1283947b/ENCFF927IGC.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF513CEX bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR657PEW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens LARP7-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF927IGC/ 899870 ENCODE Processing Pipeline 605b13b44d139bbc4739127a7cb5fe66 https://www.encodeproject.org/files/ENCFF513CEX/@@download/ENCFF513CEX.bigBed released s3://encode-public/2020/12/03/89439491-4024-4590-8ec0-c90e8486dff9/ENCFF513CEX.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/89439491-4024-4590-8ec0-c90e8486dff9/ENCFF513CEX.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking ENCFF109QHL bigWig bigWig signal p-value GRCh38 ENCSR746XEG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFXL1-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF885HTW/, /files/ENCFF377KFK/, /files/ENCFF246FIF/, /files/ENCFF232AKP/ 2199853973 ENCODE Processing Pipeline 19806c61e829c985a6fb18387ff88993 https://www.encodeproject.org/files/ENCFF109QHL/@@download/ENCFF109QHL.bigWig released s3://encode-public/2020/12/02/00916445-cc63-4c1f-a082-8886d00f0aa8/ENCFF109QHL.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/00916445-cc63-4c1f-a082-8886d00f0aa8/ENCFF109QHL.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF057NHJ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR746XEG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFXL1-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF232AKP/, /files/ENCFF885HTW/, /files/ENCFF377KFK/, /files/ENCFF356LFX/, /files/ENCFF246FIF/ 90433 ENCODE Processing Pipeline cb23bb603bd4072055593a97f33d8893 https://www.encodeproject.org/files/ENCFF057NHJ/@@download/ENCFF057NHJ.bed.gz released s3://encode-public/2020/12/02/34772c83-a9b1-4327-a6cd-5cca37cce51a/ENCFF057NHJ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/34772c83-a9b1-4327-a6cd-5cca37cce51a/ENCFF057NHJ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF513WDR bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR746XEG TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens NFXL1-human DNA 2017-05-17 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF057NHJ/ 261572 ENCODE Processing Pipeline 23cbc3d2917966479825c58d8cc972ff https://www.encodeproject.org/files/ENCFF513WDR/@@download/ENCFF513WDR.bigBed released s3://encode-public/2020/12/02/9596a166-cf6e-48ae-8c3b-0945730a7245/ENCFF513WDR.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/9596a166-cf6e-48ae-8c3b-0945730a7245/ENCFF513WDR.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released borderline replicate concordance, mild to moderate bottlenecking, antibody characterized with exemption ENCFF572PJF bigWig bigWig signal p-value GRCh38 ENCSR764CZW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF217-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF377KFK/, /files/ENCFF233IZM/, /files/ENCFF232AKP/, /files/ENCFF793MYQ/ 2196434265 ENCODE Processing Pipeline 5a85b0530c8fe778d5165a14c3f98d6a https://www.encodeproject.org/files/ENCFF572PJF/@@download/ENCFF572PJF.bigWig released s3://encode-public/2020/12/03/2c29f0c0-a902-4c7d-a6fa-8f651c4db657/ENCFF572PJF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/03/2c29f0c0-a902-4c7d-a6fa-8f651c4db657/ENCFF572PJF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF131ALE bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR764CZW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF217-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF356LFX/, /files/ENCFF232AKP/, /files/ENCFF377KFK/, /files/ENCFF233IZM/, /files/ENCFF793MYQ/ 331830 ENCODE Processing Pipeline 3232e38574dab10eb8d6eae39b22da03 https://www.encodeproject.org/files/ENCFF131ALE/@@download/ENCFF131ALE.bed.gz released s3://encode-public/2020/12/03/3143eeea-ad68-4a08-a454-ecf11366e08c/ENCFF131ALE.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/03/3143eeea-ad68-4a08-a454-ecf11366e08c/ENCFF131ALE.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF978IGL bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR764CZW TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ZNF217-human DNA 2017-06-07 ENCODE 450-650 1, 2 1_1, 2_1 /files/ENCFF131ALE/ 682091 ENCODE Processing Pipeline 4ca46eadbebe6e2bd344c9322e26748f https://www.encodeproject.org/files/ENCFF978IGL/@@download/ENCFF978IGL.bigBed released s3://encode-public/2020/12/03/7fcb5900-4493-4ed4-af7a-cf898b7f5004/ENCFF978IGL.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/03/7fcb5900-4493-4ed4-af7a-cf898b7f5004/ENCFF978IGL.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, antibody characterized with exemption ENCFF242HCG bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2012-05-14 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF718TWQ/ 719423 ENCODE Processing Pipeline a706d6e23fa82c7d6362717d19ad7472 https://www.encodeproject.org/files/ENCFF242HCG/@@download/ENCFF242HCG.bigBed released s3://encode-public/2020/12/26/d2594cab-e3bd-4d08-bc95-890197e362ce/ENCFF242HCG.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/d2594cab-e3bd-4d08-bc95-890197e362ce/ENCFF242HCG.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, improper control_type of control experiment, low read depth ENCFF718TWQ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000DZD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2012-05-14 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF363VYY/, /files/ENCFF791IGI/, /files/ENCFF278NPZ/, /files/ENCFF356LFX/ 351945 ENCODE Processing Pipeline da0dd7f0aa0c074d1d3661c1bfb0c208 https://www.encodeproject.org/files/ENCFF718TWQ/@@download/ENCFF718TWQ.bed.gz released s3://encode-public/2020/12/26/0414fafe-a881-4f2b-aa61-3c594e080823/ENCFF718TWQ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/0414fafe-a881-4f2b-aa61-3c594e080823/ENCFF718TWQ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, improper control_type of control experiment, low read depth ENCFF259DSQ bigWig bigWig signal p-value GRCh38 ENCSR000DZD TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens EP300-human DNA 2012-05-14 ENCODE 150-350 1, 2 1_1, 2_1 /files/ENCFF863XTX/, /files/ENCFF363VYY/, /files/ENCFF278NPZ/, /files/ENCFF791IGI/ 487582481 ENCODE Processing Pipeline 5f54a9766a424e35100d053034958e6a https://www.encodeproject.org/files/ENCFF259DSQ/@@download/ENCFF259DSQ.bigWig released s3://encode-public/2020/12/26/2ec0dc9b-b08e-4afd-b94d-7607baa5fdb4/ENCFF259DSQ.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/2ec0dc9b-b08e-4afd-b94d-7607baa5fdb4/ENCFF259DSQ.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, inconsistent platforms, improper control_type of control experiment, low read depth ENCFF503CWF bigWig bigWig signal p-value GRCh38 ENCSR778UBR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ARID3A-human DNA 2017-01-31 ENCODE 450-650 5, 6 5_1, 6_1 /files/ENCFF676OTD/, /files/ENCFF232AKP/, /files/ENCFF157WOW/, /files/ENCFF377KFK/ 1638630521 ENCODE Processing Pipeline f1ecfdd5a064b8058f22fb53fca2ab08 https://www.encodeproject.org/files/ENCFF503CWF/@@download/ENCFF503CWF.bigWig released s3://encode-public/2020/12/02/01e67e92-93dc-4309-ae85-bed4624f4332/ENCFF503CWF.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/02/01e67e92-93dc-4309-ae85-bed4624f4332/ENCFF503CWF.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF531CLQ bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR778UBR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ARID3A-human DNA 2017-01-31 ENCODE 450-650 5, 6 5_1, 6_1 /files/ENCFF157WOW/, /files/ENCFF232AKP/, /files/ENCFF356LFX/, /files/ENCFF676OTD/, /files/ENCFF377KFK/ 318227 ENCODE Processing Pipeline c9585d49fdab51337c7cabff49d85207 https://www.encodeproject.org/files/ENCFF531CLQ/@@download/ENCFF531CLQ.bed.gz released s3://encode-public/2020/12/02/edd4b134-63b5-42d9-a29d-b57cac1657a6/ENCFF531CLQ.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/02/edd4b134-63b5-42d9-a29d-b57cac1657a6/ENCFF531CLQ.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF006WWZ bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR778UBR TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens ARID3A-human DNA 2017-01-31 ENCODE 450-650 5, 6 5_1, 6_1 /files/ENCFF531CLQ/ 687101 ENCODE Processing Pipeline 593cf84059d425fb4aba7170053647ee https://www.encodeproject.org/files/ENCFF006WWZ/@@download/ENCFF006WWZ.bigBed released s3://encode-public/2020/12/02/22ad5755-0700-475e-85b8-3d66ae6adbf4/ENCFF006WWZ.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/02/22ad5755-0700-475e-85b8-3d66ae6adbf4/ENCFF006WWZ.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released mild to moderate bottlenecking, moderate library complexity, low read depth ENCFF107UMF bed narrowPeak bed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BIF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2AphosphoS5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF356LFX/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF521NGV/, /files/ENCFF557MXS/ 648279 ENCODE Processing Pipeline 566c729848b6eac01970cbb117259986 https://www.encodeproject.org/files/ENCFF107UMF/@@download/ENCFF107UMF.bed.gz released s3://encode-public/2020/12/26/50cad768-4f6f-4393-a096-99be64880fe9/ENCFF107UMF.bed.gz https://datasetencode.blob.core.windows.net/dataset/2020/12/26/50cad768-4f6f-4393-a096-99be64880fe9/ENCFF107UMF.bed.gz?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, inconsistent platforms ENCFF646YFR bigWig bigWig signal p-value GRCh38 ENCSR000BIF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2AphosphoS5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF519KIS/, /files/ENCFF075XYL/, /files/ENCFF882OBA/, /files/ENCFF521NGV/, /files/ENCFF557MXS/ 1033965025 ENCODE Processing Pipeline 46483d9aa217702e7012d24d5c610489 https://www.encodeproject.org/files/ENCFF646YFR/@@download/ENCFF646YFR.bigWig released s3://encode-public/2020/12/26/52af1758-ff7e-40ba-aa54-fb5091043156/ENCFF646YFR.bigWig https://datasetencode.blob.core.windows.net/dataset/2020/12/26/52af1758-ff7e-40ba-aa54-fb5091043156/ENCFF646YFR.bigWig?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, inconsistent platforms ENCFF412KAE bigBed narrowPeak bigBed narrowPeak IDR thresholded peaks GRCh38 ENCSR000BIF TF ChIP-seq /human-donors/ENCDO000AAK/ EFO:0002784 GM12878 cell line Homo sapiens POLR2AphosphoS5-human DNA 2011-07-18 ENCODE see document 1, 2 1_1, 2_1 /files/ENCFF107UMF/ 1420530 ENCODE Processing Pipeline 04454642dfb92185145ef7d5f5cb2fb0 https://www.encodeproject.org/files/ENCFF412KAE/@@download/ENCFF412KAE.bigBed released s3://encode-public/2020/12/26/07312a8e-0515-4194-b217-72868535f194/ENCFF412KAE.bigBed https://datasetencode.blob.core.windows.net/dataset/2020/12/26/07312a8e-0515-4194-b217-72868535f194/ENCFF412KAE.bigBed?sv=2019-10-10&si=prod&sr=c&sig=9qSQZo4ggrCNpybBExU8SypuUZV33igI11xw0P7rB3c%3D ENCODE4 v1.6.1 GRCh38 released low read length, mild to moderate bottlenecking, inconsistent platforms