Invoking: getsize ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta 1> $metrics Finished invoke: name: count_seqs status: 0 time: 0.072949 Invoking: fasta-most -min 50 < ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta 1> $metrics Finished invoke: name: most_seqs status: 0 time: 0.133548 Invoking: fasta-center -dna -len 100 < ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta 1> ./seqs-centered Finished invoke: name: center_seqs status: 0 time: 0.257885 Invoking: fasta-get-markov -nostatus -nosummary -dna -m 2 ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta ./background Finished invoke: name: bg status: 0 time: 0.040159 Invoking: meme ./seqs-centered -oc meme_out -mod zoops -nmotifs 3 -minw 6 -maxw 15 -bfile ./background -dna -searchsize 100000 -time 3663 -revcomp -nostatus Finished invoke: name: meme status: 0 time: 1695.220505 Invoking: streme -verbosity 1 -oc streme_out -dna -p ./seqs-centered -minw 6 -maxw 15 -time 7028 -kmer 3 -pvt 0.05 Finished invoke: name: streme status: 0 time: 6307.755985 Invoking: centrimo -seqlen 100 -verbosity 1 -oc centrimo_out -bfile ./background -score 5.0 -ethresh 10.0 ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta meme_out/meme.xml streme_out/streme.xml db/EUKARYOTE/jolma2013.meme db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme db/MOUSE/uniprobe_mouse.meme Finished invoke: name: centrimo status: 0 time: 171.9317 Invoking: tomtom -verbosity 1 -oc meme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc meme_out/meme.xml db/EUKARYOTE/jolma2013.meme db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme db/MOUSE/uniprobe_mouse.meme Finished invoke: name: meme_tomtom status: 0 time: 9.295152 Invoking: tomtom -verbosity 1 -oc streme_tomtom_out -min-overlap 5 -dist pearson -evalue -thresh 1 -no-ssc streme_out/streme.xml db/EUKARYOTE/jolma2013.meme db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme db/MOUSE/uniprobe_mouse.meme Finished invoke: name: streme_tomtom status: 0 time: 95.951622 Invoking: tomtom -verbosity 1 -text -thresh 0.1 ./combined.meme ./combined.meme 1> ./motif_alignment.txt Finished invoke: name: align status: 0 time: 3.698645 Invoking: spamo -verbosity 1 -oc spamo_out_1 -bgfile ./background -keepprimary -primary TTTTKTWTTTTTWGT ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta meme_out/meme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo1 status: 0 time: 0.287658 Invoking: spamo -verbosity 1 -oc spamo_out_2 -bgfile ./background -keepprimary -primary CCTGTARTCCCAGCW ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta meme_out/meme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo2 status: 0 time: 0.294738 Invoking: spamo -verbosity 1 -oc spamo_out_3 -bgfile ./background -keepprimary -primary YTYGGGAGGCYGAGG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta meme_out/meme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo3 status: 0 time: 0.28325 Invoking: spamo -verbosity 1 -oc spamo_out_4 -bgfile ./background -keepprimary -primary 1-GCCCCGCCCCYN ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo4 status: 0 time: 0.452529 Invoking: spamo -verbosity 1 -oc spamo_out_5 -bgfile ./background -keepprimary -primary 3-ACTACAWYTCCCAG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo5 status: 0 time: 0.293745 Invoking: spamo -verbosity 1 -oc spamo_out_6 -bgfile ./background -keepprimary -primary 5-CCAGCCTGGCCAACA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo6 status: 0 time: 0.352914 Invoking: spamo -verbosity 1 -oc spamo_out_7 -bgfile ./background -keepprimary -primary 6-AAATTAGCCGGGCRT ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo7 status: 0 time: 0.296862 Invoking: spamo -verbosity 1 -oc spamo_out_8 -bgfile ./background -keepprimary -primary 7-TAGAGACRGGGTTT ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo8 status: 0 time: 0.294072 Invoking: spamo -verbosity 1 -oc spamo_out_9 -bgfile ./background -keepprimary -primary 10-AGGTCAGGAGTTCGA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo9 status: 0 time: 0.275456 Invoking: spamo -verbosity 1 -oc spamo_out_10 -bgfile ./background -keepprimary -primary 11-TGCGCATGCGCA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo10 status: 0 time: 0.297056 Invoking: spamo -verbosity 1 -oc spamo_out_11 -bgfile ./background -keepprimary -primary 12-TGGGAA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo11 status: 0 time: 0.294849 Invoking: spamo -verbosity 1 -oc spamo_out_12 -bgfile ./background -keepprimary -primary 13-CCASCAGGGGGCGCY ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo12 status: 0 time: 0.296979 Invoking: spamo -verbosity 1 -oc spamo_out_13 -bgfile ./background -keepprimary -primary 15-GGTGGMTCACG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo13 status: 0 time: 0.296735 Invoking: spamo -verbosity 1 -oc spamo_out_14 -bgfile ./background -keepprimary -primary 16-AGGAGAATCGCTTGA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo14 status: 0 time: 0.31691 Invoking: spamo -verbosity 1 -oc spamo_out_15 -bgfile ./background -keepprimary -primary 18-AGTGAGCCGAGATCG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo15 status: 0 time: 0.293189 Invoking: spamo -verbosity 1 -oc spamo_out_16 -bgfile ./background -keepprimary -primary 19-RRCCAATSR ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo16 status: 0 time: 0.285296 Invoking: spamo -verbosity 1 -oc spamo_out_17 -bgfile ./background -keepprimary -primary 20-CGGCGGCGGCGGCGG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo17 status: 0 time: 0.294748 Invoking: spamo -verbosity 1 -oc spamo_out_18 -bgfile ./background -keepprimary -primary 21-CAAGATGGCGGC ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo18 status: 0 time: 0.293615 Invoking: spamo -verbosity 1 -oc spamo_out_19 -bgfile ./background -keepprimary -primary 22-CCGGAAGTGRCG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo19 status: 0 time: 0.295208 Invoking: spamo -verbosity 1 -oc spamo_out_20 -bgfile ./background -keepprimary -primary 23-ACAAAGSC ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo20 status: 0 time: 0.296042 Invoking: spamo -verbosity 1 -oc spamo_out_21 -bgfile ./background -keepprimary -primary 24-GRTGACGTCAYC ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo21 status: 0 time: 0.30451 Invoking: spamo -verbosity 1 -oc spamo_out_22 -bgfile ./background -keepprimary -primary 25-AGTGCAGTGGCG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo22 status: 0 time: 0.261415 Invoking: spamo -verbosity 1 -oc spamo_out_23 -bgfile ./background -keepprimary -primary 27-CAGCCCCGGG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo23 status: 0 time: 0.46178 Invoking: spamo -verbosity 1 -oc spamo_out_24 -bgfile ./background -keepprimary -primary 28-TCTGCA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo24 status: 0 time: 0.296484 Invoking: spamo -verbosity 1 -oc spamo_out_25 -bgfile ./background -keepprimary -primary 29-CACGTGAYCCG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo25 status: 0 time: 0.292898 Invoking: spamo -verbosity 1 -oc spamo_out_26 -bgfile ./background -keepprimary -primary 31-CRCGCACACACAC ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo26 status: 0 time: 0.295096 Invoking: spamo -verbosity 1 -oc spamo_out_27 -bgfile ./background -keepprimary -primary 32-TATWWATA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo27 status: 0 time: 0.29475 Invoking: spamo -verbosity 1 -oc spamo_out_28 -bgfile ./background -keepprimary -primary 33-CCAATAGGAG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo28 status: 0 time: 0.302782 Invoking: spamo -verbosity 1 -oc spamo_out_29 -bgfile ./background -keepprimary -primary 34-CGCCCGCCACC ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo29 status: 0 time: 0.295803 Invoking: spamo -verbosity 1 -oc spamo_out_30 -bgfile ./background -keepprimary -primary 37-GAAACTGAGGCHCAG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo30 status: 0 time: 0.283569 Invoking: spamo -verbosity 1 -oc spamo_out_31 -bgfile ./background -keepprimary -primary 38-CGGAAGCGGAAGCVG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo31 status: 0 time: 0.293966 Invoking: spamo -verbosity 1 -oc spamo_out_32 -bgfile ./background -keepprimary -primary 39-CTGCAGCYGCTG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo32 status: 0 time: 0.298571 Invoking: spamo -verbosity 1 -oc spamo_out_33 -bgfile ./background -keepprimary -primary 40-MRGTGAC ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo33 status: 0 time: 0.32276 Invoking: spamo -verbosity 1 -oc spamo_out_34 -bgfile ./background -keepprimary -primary 42-CGTCATCA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo34 status: 0 time: 0.303045 Invoking: spamo -verbosity 1 -oc spamo_out_35 -bgfile ./background -keepprimary -primary 43-CACCGTGTTAGCCA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo35 status: 0 time: 0.29452 Invoking: spamo -verbosity 1 -oc spamo_out_36 -bgfile ./background -keepprimary -primary 44-ATGACTCA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo36 status: 0 time: 0.296035 Invoking: spamo -verbosity 1 -oc spamo_out_37 -bgfile ./background -keepprimary -primary 46-CCAAGGTCACA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo37 status: 0 time: 0.304333 Invoking: spamo -verbosity 1 -oc spamo_out_38 -bgfile ./background -keepprimary -primary 47-TKAGAAA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo38 status: 0 time: 0.293683 Invoking: spamo -verbosity 1 -oc spamo_out_39 -bgfile ./background -keepprimary -primary 48-ATGCAAAT ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo39 status: 0 time: 0.293603 Invoking: spamo -verbosity 1 -oc spamo_out_40 -bgfile ./background -keepprimary -primary 50-GGCTGCCGGGA ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo40 status: 0 time: 0.283611 Invoking: spamo -verbosity 1 -oc spamo_out_41 -bgfile ./background -keepprimary -primary 51-GCAYSCYGGGAGYYG ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo41 status: 0 time: 0.294353 Invoking: spamo -verbosity 1 -oc spamo_out_42 -bgfile ./background -keepprimary -primary 54-GCCATGGHGACS ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta streme_out/streme.xml meme_out/meme.xml streme_out/streme.xml Finished invoke: name: spamo42 status: 0 time: 0.295814 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_1 --bgfile ./background --motif TTTTKTWTTTTTWGT meme_out/meme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo1 status: 0 time: 1.222827 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_2 --bgfile ./background --motif CCTGTARTCCCAGCW meme_out/meme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo2 status: 0 time: 1.160395 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_3 --bgfile ./background --motif YTYGGGAGGCYGAGG meme_out/meme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo3 status: 0 time: 1.166933 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_4 --bgfile ./background --motif 1-GCCCCGCCCCYN streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo4 status: 0 time: 1.200139 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_5 --bgfile ./background --motif 3-ACTACAWYTCCCAG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo5 status: 0 time: 1.188471 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_6 --bgfile ./background --motif 5-CCAGCCTGGCCAACA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo6 status: 0 time: 1.205903 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_7 --bgfile ./background --motif 6-AAATTAGCCGGGCRT streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo7 status: 0 time: 1.189793 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_8 --bgfile ./background --motif 7-TAGAGACRGGGTTT streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo8 status: 0 time: 1.194062 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_9 --bgfile ./background --motif 10-AGGTCAGGAGTTCGA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo9 status: 0 time: 1.186986 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_10 --bgfile ./background --motif 11-TGCGCATGCGCA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo10 status: 0 time: 1.172598 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_11 --bgfile ./background --motif 12-TGGGAA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo11 status: 0 time: 1.138136 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_12 --bgfile ./background --motif 13-CCASCAGGGGGCGCY streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo12 status: 0 time: 1.185239 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_13 --bgfile ./background --motif 15-GGTGGMTCACG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo13 status: 0 time: 1.295888 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_14 --bgfile ./background --motif 16-AGGAGAATCGCTTGA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo14 status: 0 time: 1.185073 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_15 --bgfile ./background --motif 18-AGTGAGCCGAGATCG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo15 status: 0 time: 1.179377 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_16 --bgfile ./background --motif 19-RRCCAATSR streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo16 status: 0 time: 1.154066 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_17 --bgfile ./background --motif 20-CGGCGGCGGCGGCGG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo17 status: 0 time: 1.196213 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_18 --bgfile ./background --motif 21-CAAGATGGCGGC streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo18 status: 0 time: 1.178456 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_19 --bgfile ./background --motif 22-CCGGAAGTGRCG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo19 status: 0 time: 1.175508 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_20 --bgfile ./background --motif 23-ACAAAGSC streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo20 status: 0 time: 1.176371 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_21 --bgfile ./background --motif 24-GRTGACGTCAYC streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo21 status: 0 time: 1.167366 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_22 --bgfile ./background --motif 25-AGTGCAGTGGCG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo22 status: 0 time: 1.168398 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_23 --bgfile ./background --motif 27-CAGCCCCGGG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo23 status: 0 time: 1.184332 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_24 --bgfile ./background --motif 28-TCTGCA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo24 status: 0 time: 1.135681 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_25 --bgfile ./background --motif 29-CACGTGAYCCG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo25 status: 0 time: 1.164874 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_26 --bgfile ./background --motif 31-CRCGCACACACAC streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo26 status: 0 time: 1.189551 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_27 --bgfile ./background --motif 32-TATWWATA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo27 status: 0 time: 1.176344 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_28 --bgfile ./background --motif 33-CCAATAGGAG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo28 status: 0 time: 1.166697 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_29 --bgfile ./background --motif 34-CGCCCGCCACC streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo29 status: 0 time: 1.170697 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_30 --bgfile ./background --motif 37-GAAACTGAGGCHCAG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo30 status: 0 time: 1.207389 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_31 --bgfile ./background --motif 38-CGGAAGCGGAAGCVG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo31 status: 0 time: 1.19355 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_32 --bgfile ./background --motif 39-CTGCAGCYGCTG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo32 status: 0 time: 1.192844 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_33 --bgfile ./background --motif 40-MRGTGAC streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo33 status: 0 time: 1.160916 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_34 --bgfile ./background --motif 42-CGTCATCA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo34 status: 0 time: 1.148463 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_35 --bgfile ./background --motif 43-CACCGTGTTAGCCA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo35 status: 0 time: 1.178228 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_36 --bgfile ./background --motif 44-ATGACTCA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo36 status: 0 time: 1.144783 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_37 --bgfile ./background --motif 46-CCAAGGTCACA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo37 status: 0 time: 1.166672 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_38 --bgfile ./background --motif 47-TKAGAAA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo38 status: 0 time: 1.167872 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_39 --bgfile ./background --motif 48-ATGCAAAT streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo39 status: 0 time: 1.165662 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_40 --bgfile ./background --motif 50-GGCTGCCGGGA streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo40 status: 0 time: 1.169584 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_41 --bgfile ./background --motif 51-GCAYSCYGGGAGYYG streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo41 status: 0 time: 1.179212 Invoking: fimo --parse-genomic-coord --verbosity 1 --oc fimo_out_42 --bgfile ./background --motif 54-GCCATGGHGACS streme_out/streme.xml ./Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta Finished invoke: name: fimo42 status: 0 time: 1.163146 Writing output Invoking: meme-chip_html_to_tsv ./meme-chip.html ./summary.tsv "meme-chip -oc . -time 300 -ccut 100 -fdesc description -dna -order 2 -minw 6 -maxw 15 -db db/EUKARYOTE/jolma2013.meme -db db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme -db db/MOUSE/uniprobe_mouse.meme -meme-mod zoops -meme-nmotifs 3 -meme-searchsize 100000 -streme-pvt 0.05 -centrimo-score 5.0 -centrimo-ethresh 10.0 Patient_3_NOTCH-GSM2439182.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta" 5.3.0 "Wed Nov 25 19\:19\:29 2020 -0800" Finished invoke: name: summary status: 0 time: 0.248567 Done