]> fimo /oak/stanford/groups/akundaje/marinovg/programs/meme_4.12.0/meme/bin/fimo --oc FIMO-Control_4_FGFR1_GSM2439179-MEMECHIP /oak/stanford/groups/akundaje/marinovg/various/2020-12-05-FGFR1-chrM/Control_4_FGFR1_GSM2439179-appMEMECHIP_5.3.01607328249702711587880/combined.meme /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/chrM.fa /oak/stanford/groups/akundaje/marinovg/various/2020-12-05-FGFR1-chrM/Control_4_FGFR1_GSM2439179-appMEMECHIP_5.3.01607328249702711587880/combined.meme /oak/stanford/groups/akundaje/marinovg/genomes/hg20/bowtie-indexes/chrM.fa 0.0001 CCCCGCCCGCGTCCC 0.00847 CCCCTCCCCCGCTTC 0.00847 CCCCTCCCCATACCC 0.021 CCCCACCCCAGTCTC 0.0446 CCCCTCCCACTCCCA 0.0537 CCTAGCCCCTACCCC 0.0605 CCCCTCCCCATGCTT 0.0605 CCTCGCCTTACCCCC 0.0624 CTCCTCCTCCGGCGG 0.0624 CCCAACCCCCTGGTC 0.0624 CCCCTCCCCACATCA 0.0624 CCCCACCCCATCCAA 0.0624 CTCCACCCCTGACTC 0.0624 CCCCACCCTACCACA 0.0825 CCTCACCCCCACTGA 0.0915 CCCCGCCCATCCTAC 0.094 CCTCGCTCCGGGCCC 0.094 CTTCTCCCGCCGCCG 0.101 CTCAACCCCTGACCC 0.101 CGCATCCCCCTTCCA 0.101 CCCAGCCCATGACCC 0.101 CCCCGCCTGTTTACC 0.101 CCTAGCCCCAAACCC 0.101 yes AAAAATAAAAAATTA 0.00596 AAACAACAAAGCATA 0.239 ATAAAAATAAAAAAT 0.239 AAAATATTAAACACA 0.239 AAAAATTATAACAAA 0.239 CAAAAGATAAAATTT 0.239 aaaacttaaaacttt 0.239 TAAAAATAAAAAATT 0.248 ACAACGTAAAAATAA 0.255 AAAATCCCAAACATA 0.255 AAAAAAATAAACCCT 0.255 AAAAATTATAACCAA 0.255 yes CCCCTCCCACTCCC 0.0161 CCCCTCCCCCGCTT 0.0161 CCCCTCCCCATACC 0.0185 CCCCACCCCATCCA 0.0185 CCCCTCCCCATGCT 0.0185 CCCCACCCCAGTCT 0.0259 CACCGCCCCGACCT 0.0272 CCCCTCCCCACATC 0.0304 CCCCGCCCATCCTA 0.0581 CCCCTACTCCTCCT 0.0581 CCCCACCCTACCAC 0.0581 CCCAACCCCCTGGT 0.0666 CCACACCCCCACGG 0.0691 CCCCTACCCCCCAA 0.0691 CCCCACCTCCAAAT 0.0691 CCCCGCCCGCGTCC 0.0708 CCCCTCCCCAATAA 0.0708 CACCTCCCATTCCG 0.0708 CCCCACCCTTACTA 0.0708 CACCACCTCTTGCT 0.0708 CCCAGCCCATGACC 0.0708 CACCACCCCATCAT 0.0759 CTCCTCCTCCGGCG 0.0759 CCCAACCTCCGAGC 0.0759 CCCCAACCTTTTCC 0.0806 CCCCTACTCATCGC 0.0817 CCCCGACCTTAGCT 0.0817 CTCCACCCCTGACT 0.0851 CCAAACCCCCCCTC 0.0893 CCCATACCCAACCC 0.0903 CCCCTCCTAATACT 0.101 yes CTGTCAACCCAACAC 0.462 CTGCCATCTTAACAA 0.462 AAATAATTCAAGCAC 0.462 CAGCCATTCAAGCAA 0.462 CTATAAACCTAGCCA 0.462 yes CGCCATCTTCAGCA 0.955 CTCCATCTATTGAT 0.955 yes AGAGGAAGTAA 1 yes GCCTGATCCTCCAAA 0.358 GCCTCATCATCCCCA 0.358 TCCTCACTCTCTCAA 0.445 ACCTCAACTACCTAA 0.445 ACTTCAACCTCCCTC 0.445 TCATCGACCTCCCCA 0.445 yes TTGCAGCCCTAGCAA 1 CTGGAGTCCTAGGCA 1 yes ACTACAACCAC 0.27 ACTAAAACCCC 0.27 ACTACAAGAAC 0.41 ACTAAACCCCC 0.41 ACTACTTCTCC 0.41 ACTAAAAATAT 0.41 ACTACAACCCT 0.41 yes GCAGCCCTAGCAAC 1 GTTGCTAGGGCTGC 1 yes CGAAGCCGCCGC 0.0474 TGCAGCCGCTAT 1 yes GACCAATGGGAC 0.537 AGCCAATCACTT 0.537 GACAAATCAGAG 0.537 yes CCCAGCCC 0.161 CCCCGCCC 0.161 CCCCGCCC 0.161 CCCAGCTC 0.195 CCCAGCTC 0.195 CCCACCCC 0.195 CCCACCCC 0.195 CCCACCCC 0.195 CCCAACCC 0.247 CCCAACCC 0.247 yes AGGAGTTGAAGATTA 0.0626 TGGAGATTGAGACTA 0.0828 AGTAGATTGAAGCCA 0.267 yes GAAGATGGCGG 0.319 TAACATGGTAA 0.319 taagatggcag 0.319 AAAGATGGTAG 0.577 yes CAGGCATGCTCA 1 TGAGCATGCCTG 1 yes AAACTAGGCGGCTAT 1 yes GTGCCAGCCACCGC 0.424 GCATGTGCCATTAA 0.424 GTATGGCCCACCAT 0.513 ACATGTGTCACTGG 0.559 GTTTGGGCTACTGC 0.575 yes AAGAATCGTGTGAG 0.602 GAGAATAGTTTAAA 0.602 TAGGATTGCTTGAA 0.602 ATCAATCACCTGAG 0.602 yes yes AGGAAGGGG 0.253 AGGAAGCAG 0.263 AGGAGGGGG 0.278 AGGAAGAGG 0.278 AGGAAGCTG 0.278 AGGAGGTGG 0.293 GGGAAGCAG 0.293 AGGCGGCGG 0.293 AGGTAGCGG 0.293 AGGAGGAGG 0.318 yes yes CGGCTCCAG 0.588 AGGCTCCAG 0.588 GGGCTGCAA 0.968 yes CAGCTCTTTGGACAC 0.836 CAGCAGCTAGGACTG 0.898 CAGTACTGCGGCGGG 0.898 yes TAGGAGAGAGGGAG 0.185 AGAAAGAGAGGAAG 0.185 AGGCTAGGAGGGTG 0.185 AAGGAGAGAAGGAA 0.185 AGAGAGGGAGGTAA 0.213 AGCGGGGGAGGGGG 0.213 AGGATGGGCGGGGG 0.213 AGGGAAAGATGAAA 0.213 TGGGAAGAAGAAAG 0.213 AGGGAGGTAGCGAT 0.213 AGCGATGGAGGTAG 0.213 ATGGAGAAAGGGAC 0.213 AGGGAGGTTAGAAG 0.213 AAAAAAGGCGGGAG 0.216 yes AACAAAG 0.869 AACAAAG 0.869 AACAAAG 0.869 yes yes AGCCGGAAGC 1 yes CACCCCCTCCC 0.0479 CGCTACCTCCC 0.0633 CGATCCCTCCC 0.0633 AACCCCCTCCC 0.149 CCCCCCCTCCC 0.149 CGCTTCCACCC 0.149 AGGCCCCACCC 0.149 CACCCACTCCC 0.149 GGCTCCCTTCC 0.252 CGCACTCTCCC 0.252 CACCGCCTGCC 0.252 CACACCCACCC 0.252 yes GCACACACACACC 0.371 ACCCACACCCACC 0.371 AAACCCACACTCA 0.401 AAACCCACAAACA 0.428 AGCCACACCCCCA 0.428 ACACACACACCGC 0.44 AGACACACGAGCA 0.44 yes GTTGCTAGG 0.24 GTGGCTATG 0.347 GTGGCTAGG 0.347 GTTGTTAGG 0.347 GTTGATATG 0.347 ATTGCTAGG 0.414 ATTGCTAGG 0.414 yes GACCTCGTCTGT 0.43 AACCCCATTACT 0.43 AACCTGATCTCT 0.43 AAACCTATTTGT 0.598 AAACACATCTCT 0.598 yes CTATCTCTCCCAG 0.497 CTGGGTCGCCTAG 0.582 yes AGAAACAAAGCA 0.2 aaaaggaaggaa 0.2 GGAAAAAAAGAA 0.2 AAAAACAAAGAA 0.2 AGAAAGAGAGGA 0.239 yes CGCCCCGACCT 1 GGCCCCACCCC 1 yes CCCTTCCC 0.107 CCCTTCCC 0.107 CCCCTCCC 0.107 CCCTCCCC 0.107 CCCCTCCC 0.107 CCCCTCCC 0.107 CCCTCCCC 0.107 CCCCTCCC 0.107 CCCTCCCC 0.107 CCCCTCCC 0.107 CCCTCCCC 0.107 CCCCTCCC 0.107 CCCTCCCC 0.107 yes GTGAGCCGAAGTTTC 0.278 GTGAGCTCAGGTGAT 0.278 ATGAGTCGAAATCAT 0.278 GAGAGCTAAGGTCGG 0.278 GTGAGGTAAAATGGC 0.393 GTAAGCCGAGGGCGT 0.484 yes AAATACAA 0.875 yes TGACATCA 0.398 TGATGTCA 0.398 TGATATCA 0.398 TGATATCA 0.398 TGATATCA 0.398 TGATATCA 0.398 yes TAGCAGCAGC 0.284 CAGAAGCTGC 0.284 CAGCAGCAGG 0.29 TAGCGGCTGC 0.344 TAGCAACAGC 0.356 CAGCAGCTAG 0.356 TAGCAGATGC 0.412 yes GCGCATGAGC 0.413 GCTCATGCGC 0.413 yes yes TGTTTACCAAAAACA 0.455 TCTCTACTCAGAAAC 0.455 TGGCTACAAAAAATG 0.455 TCTAACCAAAAAAAT 0.455 TCTTTACTATAAAAG 0.642 yes CCTGCCCCTACTCCT 0.027 CCTCCTCGGACTCCT 0.0547 CCTCCTACTCCTCAT 0.0649 CCTTCCCCTACTCAT 0.0649 CTTCCACTATGTCCT 0.13 CCTTATCTGCTTCCT 0.13 CTCTCTCCTACTCCT 0.13 CCACCTCCTATTCTT 0.13 CTTCGCCCTATTCTT 0.13 CCTTCTCCACTTCAA 0.13 CCTCATCCTATTATT 0.13 CTTCCTCTCTTTCTT 0.13 TCTCTTCCTTCTCTC 0.13 CTTTCACTTCATCTT 0.13 CTTTATCTGCCTCTT 0.13 CCTTCTCGTCCCCAT 0.13 ACTTCTCTTCCTTCT 0.13 CCTTCTCCTATTTAT 0.13 CCTCATCGCCCTCCC 0.13 CCTCGGCTTACTTCT 0.13 GCCCCTACTCCTCCT 0.13 CTTCCCACTCATCCT 0.13 CCTCCCCCGCTTCTG 0.13 CCTGCTTCTTCTCAC 0.13 yes ATAAATAA 0.972 ATGAATAA 0.972 ATAAATAT 1 yes CTACTCCACTCAAGC 0.249 CCACTCCAGCCTAGC 0.249 CCACCACACACCACC 0.323 ATCCTACACTCCAAC 0.488 CCATTCTATACCAAC 0.488 CTACCGCATTCCTAC 0.488 yes GACCTCGTCTGTT 0.374 GACCTCCTCATTC 0.374 yes ATGCTAATAA 0.341 ATGTAAATGA 1 yes CCCGCCTC 1 yes GGCTCCTTTAA 0.385 GGTGCCTCTAA 1 GGCCCATTTGA 1 yes ATGCTGGAGATTG 1 ACTGTGGGGGGTG 1 yes GGGGTAAGGCGAGG 0.0878 ATGCTAAGGCGAGG 0.0878 AGGCAGGCGCCAAG 0.0878 GTGGGGAAGCGAGG 0.0878 GGGTAGGAGTCAGG 0.194 AGGGTGACGGGCGG 0.194 GGCCCGGAGCGAGG 0.194 AGGAGAGAGGGAGG 0.194 ATGGTGAGCTCAGG 0.194 TGGCTGAGGGGAGT 0.194 GGGTAGGGGCTAGG 0.26 yes TAAGGTCA 1 CAACGTCA 1 yes CGAGGCC 1 CGCGGCC 1 yes