MOTIF_INDEX MOTIF_SOURCE MOTIF_ID ALT_ID CONSENSUS WIDTH SITES E-VALUE E-VALUE_SOURCE MOST_SIMILAR_MOTIF_SOURCE MOST_SIMILAR_MOTIF URL 1 MEME CCCCGCCCCCSCCCC MEME-1 CCCCGCCCCCSCCCC 15 8458 3.3e-089 MEME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0516.1 (SP2) http://jaspar2018.genereg.net/matrix/MA0516.1 2 MEME AAAAWAMAAAAAWWA MEME-2 AAAAWAMAAAAAWWA 15 542 8.3e-051 MEME db/MOUSE/uniprobe_mouse.meme UP00077_2 (Srf_secondary) http://thebrain.bwh.harvard.edu/uniprobe/details2.php?id=00077 3 STREME 1-CCCCGCCCCCNCCC STREME-1 CCCCGCCCCCNCCC 14 7494 2.1e-042 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0516.1 (SP2) http://jaspar2018.genereg.net/matrix/MA0516.1 4 MEME CTGTAATCCCAGCWM MEME-3 CTGTAATCCCAGCWM 15 276 4.7e-030 MEME 5 STREME 2-CGCCCYCTGSYGGC STREME-2 CGCCCYCTGSYGGC 14 550 6.7e-014 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0139.1 (CTCF) http://jaspar2018.genereg.net/matrix/MA0139.1 6 STREME 3-RCCGGAAGTGR STREME-3 RCCGGAAGTGR 11 1029 2.2e-011 STREME db/EUKARYOTE/jolma2013.meme ELK1_DBD_2 http://floresta.eead.csic.es/footprintdb/index.php?db=HumanTF:1.0&motif=ELK1_DBD_2 7 STREME 4-GCCTCRGCCTCCCAA STREME-4 GCCTCRGCCTCCCAA 15 474 1.3e-010 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0039.3 (KLF4) http://jaspar2018.genereg.net/matrix/MA0039.3 8 STREME 5-CTGTAATCCCAGCWM STREME-5 CTGTAATCCCAGCWM 15 453 2.5e-010 STREME 9 STREME 6-ACTACAAHTCC STREME-6 ACTACAAHTCC 11 467 3.8e-010 STREME 10 STREME 7-GTTGCCATGGCAAC STREME-7 GTTGCCATGGCAAC 14 336 8.6e-010 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0509.1 (Rfx1) http://jaspar2018.genereg.net/matrix/MA0509.1 11 STREME 8-YGCMGCCGCCRC STREME-8 YGCMGCCGCCRC 12 4361 1.4e-009 STREME 12 STREME 9-RGCCAATSAGMR STREME-9 RGCCAATSAGMR 12 832 1.5e-009 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0060.3 (NFYA) http://jaspar2018.genereg.net/matrix/MA0060.3 13 STREME 10-CCCAGCCC STREME-10 10-CCCAGCCC 8 6035 5.8e-009 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0079.3 (SP1) http://jaspar2018.genereg.net/matrix/MA0079.3 14 STREME 11-AGGAGTTCRAGACCA STREME-11 11-AGGAGTTCRAGACCA 15 259 7.0e-009 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0505.1 (Nr5a2) http://jaspar2018.genereg.net/matrix/MA0505.1 15 STREME 12-CAASATGGYGR STREME-12 12-CAASATGGYGR 11 675 9.5e-009 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0095.2 (YY1) http://jaspar2018.genereg.net/matrix/MA0095.2 16 STREME 13-YGCGCATGCGCR STREME-13 13-YGCGCATGCGCR 12 374 1.4e-007 STREME db/EUKARYOTE/jolma2013.meme NRF1_full http://floresta.eead.csic.es/footprintdb/index.php?db=HumanTF:1.0&motif=NRF1_full 17 STREME 14-AAATTAGCYRGGCRT STREME-14 14-AAATTAGCYRGGCRT 15 268 9.2e-007 STREME 18 STREME 15-GCRTGAGCCACYRY STREME-15 15-GCRTGAGCCACYRY 14 204 5.3e-006 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0477.1 (FOSL1) http://jaspar2018.genereg.net/matrix/MA0477.1 19 STREME 16-GAGRATCRCTTGAR STREME-16 16-GAGRATCRCTTGAR 14 309 4.3e-005 STREME 20 STREME 17-GTCACGTGAC STREME-17 17-GTCACGTGAC 10 614 4.8e-005 STREME db/EUKARYOTE/jolma2013.meme ARNTL_DBD http://floresta.eead.csic.es/footprintdb/index.php?db=HumanTF:1.0&motif=ARNTL_DBD 21 STREME 18-AGGAAGCGG STREME-18 18-AGGAAGCGG 9 1701 4.9e-005 STREME db/EUKARYOTE/jolma2013.meme ETV6_full_1 http://floresta.eead.csic.es/footprintdb/index.php?db=HumanTF:1.0&motif=ETV6_full_1 22 STREME 19-NTCTCGCGAGAN STREME-19 19-NTCTCGCGAGAN 12 157 1.3e-004 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0527.1 (ZBTB33) http://jaspar2018.genereg.net/matrix/MA0527.1 23 STREME 20-CGGCTGCAG STREME-20 20-CGGCTGCAG 9 1209 1.6e-004 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0521.1 (Tcf12) http://jaspar2018.genereg.net/matrix/MA0521.1 24 STREME 21-CAGCACCRCGGACAG STREME-21 21-CAGCACCRCGGACAG 15 133 4.8e-004 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0138.2 (REST) http://jaspar2018.genereg.net/matrix/MA0138.2 25 STREME 22-AGGGAGGGAGGGAG STREME-22 22-AGGGAGGGAGGGAG 14 166 1.3e-003 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0149.1 (EWSR1-FLI1) http://jaspar2018.genereg.net/matrix/MA0149.1 26 STREME 23-AACAAAG STREME-23 23-AACAAAG 7 2078 1.4e-003 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0514.1 (Sox3) http://jaspar2018.genereg.net/matrix/MA0514.1 27 STREME 24-ACAAAG STREME-24 24-ACAAAG 6 493 1.5e-003 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0442.2 (SOX10) http://jaspar2018.genereg.net/matrix/MA0442.2 28 STREME 25-ACCCGGAAGY STREME-25 25-ACCCGGAAGY 10 207 1.8e-003 STREME db/EUKARYOTE/jolma2013.meme ELF1_DBD http://floresta.eead.csic.es/footprintdb/index.php?db=HumanTF:1.0&motif=ELF1_DBD 29 STREME 26-CGCCCCCTCCC STREME-26 26-CGCCCCCTCCC 11 524 1.9e-003 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0516.1 (SP2) http://jaspar2018.genereg.net/matrix/MA0516.1 30 STREME 27-ACACACACACACA STREME-27 27-ACACACACACACA 13 536 1.9e-003 STREME 31 STREME 28-GTTGCTAKG STREME-28 28-GTTGCTAKG 9 103 1.9e-003 STREME db/MOUSE/uniprobe_mouse.meme UP00056_1 (Rfx4_primary) http://thebrain.bwh.harvard.edu/uniprobe/details2.php?id=00056 32 STREME 29-AACCCYRTCTCT STREME-29 29-AACCCYRTCTCT 12 174 2.1e-003 STREME 33 STREME 30-CTCTGTYGCCCAG STREME-30 30-CTCTGTYGCCCAG 13 94 3.9e-003 STREME 34 STREME 31-AGAAAGAAAGAA STREME-31 31-AGAAAGAAAGAA 12 796 4.3e-003 STREME 35 STREME 32-GGCCCCGCCCC STREME-32 32-GGCCCCGCCCC 11 1352 4.8e-003 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0079.3 (SP1) http://jaspar2018.genereg.net/matrix/MA0079.3 36 STREME 33-CCCTTCCC STREME-33 33-CCCTTCCC 8 761 6.2e-003 STREME db/MOUSE/uniprobe_mouse.meme UP00002_1 (Sp4_primary) http://thebrain.bwh.harvard.edu/uniprobe/details2.php?id=00002 37 STREME 34-GTGAGCYGAGATCRY STREME-34 34-GTGAGCYGAGATCRY 15 128 7.8e-003 STREME 38 STREME 35-AAATACAA STREME-35 35-AAATACAA 8 59 7.8e-003 STREME 39 STREME 36-TGAYRTCA STREME-36 36-TGAYRTCA 8 100 1.1e-002 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0018.3 (CREB1) http://jaspar2018.genereg.net/matrix/MA0018.3 40 STREME 37-CAGCAGCTGC STREME-37 37-CAGCAGCTGC 10 746 1.5e-002 STREME db/MOUSE/uniprobe_mouse.meme UP00099_1 (Ascl2_primary) http://thebrain.bwh.harvard.edu/uniprobe/details2.php?id=00099 41 STREME 38-GCGCATGCGC STREME-38 38-GCGCATGCGC 10 184 1.8e-002 STREME db/EUKARYOTE/jolma2013.meme NRF1_full http://floresta.eead.csic.es/footprintdb/index.php?db=HumanTF:1.0&motif=NRF1_full 42 STREME 39-CTGAGTCAY STREME-39 39-CTGAGTCAY 9 678 1.8e-002 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0501.1 (MAF::NFE2) http://jaspar2018.genereg.net/matrix/MA0501.1 43 STREME 40-TCTCTACAAAAAAWA STREME-40 40-TCTCTACAAAAAAWA 15 162 1.9e-002 STREME 44 STREME 41-CCTCCTCCTCCTCCT STREME-41 41-CCTCCTCCTCCTCCT 15 159 2.4e-002 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0528.1 (ZNF263) http://jaspar2018.genereg.net/matrix/MA0528.1 45 STREME 42-ATAAATAA STREME-42 42-ATAAATAA 8 1604 3.0e-002 STREME db/EUKARYOTE/jolma2013.meme FOXC2_DBD_2 http://floresta.eead.csic.es/footprintdb/index.php?db=HumanTF:1.0&motif=FOXC2_DBD_2 46 STREME 43-CCACTGCACTCCAGC STREME-43 43-CCACTGCACTCCAGC 15 107 3.1e-002 STREME 47 STREME 44-GACCTCGTGATCC STREME-44 44-GACCTCGTGATCC 13 48 3.1e-002 STREME db/MOUSE/uniprobe_mouse.meme UP00060_1 (Max_primary) http://thebrain.bwh.harvard.edu/uniprobe/details2.php?id=00060 48 STREME 45-ATGCWAATSA STREME-45 45-ATGCWAATSA 10 144 3.3e-002 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0507.1 (POU2F2) http://jaspar2018.genereg.net/matrix/MA0507.1 49 STREME 46-CCCGGCTC STREME-46 46-CCCGGCTC 8 729 3.5e-002 STREME db/MOUSE/uniprobe_mouse.meme UP00048_2 (Rara_secondary) http://thebrain.bwh.harvard.edu/uniprobe/details2.php?id=00048 50 STREME 47-KGCCCCTTTAA STREME-47 47-KGCCCCTTTAA 11 70 3.5e-002 STREME 51 STREME 48-MTTCTGGGAADTG STREME-48 48-MTTCTGGGAADTG 13 128 3.5e-002 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0519.1 (Stat5a::Stat5b) http://jaspar2018.genereg.net/matrix/MA0519.1 52 STREME 49-AGGCAGAGGCGAGG STREME-49 49-AGGCAGAGGCGAGG 14 77 3.5e-002 STREME 53 STREME 50-CAAGGTCA STREME-50 50-CAAGGTCA 8 113 4.6e-002 STREME db/EUKARYOTE/jolma2013.meme Esrra_DBD_2 http://floresta.eead.csic.es/footprintdb/index.php?db=HumanTF:1.0&motif=Esrra_DBD_2 54 STREME 51-CGAGGCC STREME-51 51-CGAGGCC 7 899 4.9e-002 STREME db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme MA0146.2 (Zfx) http://jaspar2018.genereg.net/matrix/MA0146.2 # MEME-ChIP (Motif Analysis of Large Nucleotide Datasets): Version 5.3.0 released on Wed Nov 25 19:19:29 2020 -0800 # The format of this file is described at http://meme-suite.org/doc/meme-chip-output-format.html # meme-chip -oc . -time 300 -ccut 100 -fdesc description -dna -order 2 -minw 6 -maxw 15 -db db/EUKARYOTE/jolma2013.meme -db db/JASPAR/JASPAR2018_CORE_vertebrates_non-redundant.meme -db db/MOUSE/uniprobe_mouse.meme -meme-mod zoops -meme-nmotifs 3 -meme-searchsize 100000 -streme-pvt 0.05 -centrimo-score 5.0 -centrimo-ethresh 10.0 Control_4_FGFR1_GSM2439179.1x50mers.hg38-no-haps.unique.MACS2_peaks.100bp.fasta