Index of /kundaje/marinovg/oak/papers/2024_Euplotes_genome/2019-12-03-NextSeq-run/SPAdes-3.13-L1152-L1147-Euplotes_sym_gDNA-reamp

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]assembly_graph.fastg2019-12-06 09:34 633M 
[ ]assembly_graph_with_scaffolds.gfa2019-12-06 09:34 321M 
[ ]before_rr.fasta2019-12-06 09:34 315M 
[ ]contigs.GC2019-12-06 09:37 15M 
[ ]contigs.GC.max452019-12-06 09:42 4.4M 
[ ]contigs.GC.max45.30bp.end1.CCCCAAAA.end2.TTTTGGGG.nodes2019-12-06 09:43 313K 
[ ]contigs.GC.max45.30bp.end1.CCCCAAAA.end2.TTTTGGGG.nodes.list2019-12-06 10:01 305K 
[ ]contigs.GC.max45.30bp.end1.CCCCAAAA.nodes2019-12-06 09:43 591K 
[ ]contigs.GC.max45.30bp.end1.CCCCAAAA.nodes.list2019-12-06 10:07 507K 
[ ]contigs.GC.max45.30bp.end1.bed2019-12-06 09:43 3.3M 
[ ]contigs.GC.max45.30bp.end1.fa2019-12-06 09:43 5.9M 
[ ]contigs.GC.max45.30bp.end2.TTTTGGGG.nodes2019-12-06 09:43 652K 
[ ]contigs.GC.max45.30bp.end2.TTTTGGGG.nodes.list2019-12-06 10:07 508K 
[ ]contigs.GC.max45.30bp.end2.bed2019-12-06 09:43 3.6M 
[ ]contigs.GC.max45.30bp.end2.fa2019-12-06 09:43 6.2M 
[ ]contigs.GC.max45.chrom.sizes2019-12-06 09:43 3.3M 
[ ]contigs.GC.max45.fasta2019-12-06 09:42 83M 
[ ]contigs.GC.max45_GC.min_500bp.coverage.end1.CCCCAAAA.end2.TTTTGGGG.table2019-12-06 10:07 517K 
[ ]contigs.GC.max45_GC.min_500bp.coverage.end1.CCCCAAAA.table2019-12-06 10:07 799K 
[ ]contigs.GC.max45_GC.min_500bp.coverage.end2.TTTTGGGG.table2019-12-06 10:07 805K 
[ ]contigs.GC.max45_GC.min_500bp.coverage.table2019-12-06 10:05 2.3M 
[ ]contigs.GC.min452019-12-06 09:42 11M 
[ ]contigs.GC.min45.coverage2024-04-01 23:58 12M 
[ ]contigs.GC.min45.max10_coverage2024-04-02 00:01 12M 
[ ]contigs.GC.min45.max10_coverage.chrom.sizes2024-04-02 00:03 7.7M 
[ ]contigs.GC.min45.max10_coverage.fasta2024-04-02 00:03 145M 
[ ]contigs.GC.min45.min10_coverage2024-04-02 00:01 283K 
[ ]contigs.GC.min45.min10_coverage.chrom.sizes2024-04-02 00:03 186K 
[ ]contigs.GC.min45.min10_coverage.fasta2024-04-02 00:03 87M 
[ ]contigs.GC.min_500bp.coverage.table2019-12-06 10:03 5.9M 
[ ]contigs.N50N902019-12-06 09:36 17  
[ ]contigs.chrom.sizes2019-12-06 09:36 11M 
[ ]contigs.fasta2019-12-06 09:34 315M 
[ ]contigs.paths2019-12-06 09:34 26M 
[ ]dataset.info2019-12-06 05:43 101  
[ ]input_dataset.yaml2019-12-05 16:32 369  
[TXT]params.txt2019-12-05 16:32 2.0K 
[ ]scaffolds.GC2019-12-06 09:36 15M 
[ ]scaffolds.N50N902019-12-06 09:36 17  
[ ]scaffolds.chrom.sizes2019-12-06 09:36 11M 
[ ]scaffolds.fasta2019-12-06 09:34 315M 
[ ]scaffolds.paths2019-12-06 09:34 26M 
[ ]spades.log2019-12-06 09:34 181K 
[ ]warnings.log2019-12-06 09:34 1.3K 
[ ]z2024-06-07 05:36 305K 
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